RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TGFB1I1O43294 461 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 TOM1O60784 492 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 LMNB1P20700 586 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 INPP5BP32019 993 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 PSMC2P35998 433 aaKnown RBP14.49□□□□□ -0.09
SRP54-201ENST00000216774 KLRC3Q07444 240 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 RUFY4Q6ZNE9 571 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 YTHDF3Q7Z739 585 aaKnown RBP14.49□□□□□ -0.09
SRP54-201ENST00000216774 DAAM2Q86T65 1068 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 SLC30A5Q8TAD4 765 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 AP1M1Q9BXS5 423 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 GGA2Q9UJY4 613 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 DIS3Q9Y2L1 958 aaKnown RBP14.49□□□□□ -0.09
SRP54-201ENST00000216774 SAMM50Q9Y512 469 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 VGLL3A8MV65 326 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 PIK3CDO00329 1044 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 NPM3O75607 178 aaKnown RBP14.49□□□□□ -0.09
SRP54-201ENST00000216774 SOX5P35711 763 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 CYP4A11Q02928 519 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 DOK7Q18PE1 504 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 SYDE2Q5VT97 1194 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 NAA35Q5VZE5 725 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 RINT1Q6NUQ1 792 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 FAM186BQ8IYM0 893 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 FBXO41Q8TF61 875 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 IDI2Q9BXS1 227 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 STK33Q9BYT3 514 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 TUFT1Q9NNX1 390 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 PCDHB13Q9Y5F0 798 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 UBE4BO95155 1302 aa14.49□□□□□ -0.09
SRP54-201ENST00000216774 ZMYM2Q9UBW7 1377 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 F8VZ95 297 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 CLIC2O15247 247 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 KIAA0754O94854 1291 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 SLURP2P0DP57 97 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 CTNNA1P35221 906 aaKnown RBP14.48□□□□□ -0.09
SRP54-201ENST00000216774 LIG3P49916 1009 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 UAP1Q16222 522 aaPredicted RBP14.48□□□□□ -0.09
SRP54-201ENST00000216774 USH1GQ495M9 461 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 U2AF1L4Q8WU68 220 aaKnown RBP14.48□□□□□ -0.09
SRP54-201ENST00000216774 HSD17B14Q9BPX1 270 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 DDX47Q9H0S4 455 aaKnown RBP14.48□□□□□ -0.09
SRP54-201ENST00000216774 AMFRQ9UKV5 643 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 MEFVO15553 781 aaPredicted RBP14.48□□□□□ -0.09
SRP54-201ENST00000216774 EVI5O60447 810 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 FAM13AO94988 1023 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 TMEM253P0C7T8 217 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 CCDC172P0C7W6 258 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 GALCP54803 685 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 ZNF844Q08AG5 666 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 KCNA1Q09470 495 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 BTNL9Q6UXG8 535 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 C3orf20Q8ND61 904 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 OLIG1Q8TAK6 271 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 RFFLQ8WZ73 363 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 FAM114A2Q9NRY5 505 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 SEL1LQ9UBV2 794 aa14.48□□□□□ -0.09
SRP54-201ENST00000216774 DDTLA6NHG4 134 aaPredicted RBP14.47□□□□□ -0.09
SRP54-201ENST00000216774 EML1O00423 815 aa14.47□□□□□ -0.09
SRP54-201ENST00000216774 FAM107AO95990 144 aa14.47□□□□□ -0.09
SRP54-201ENST00000216774 NDUFB10O96000 172 aa14.47□□□□□ -0.09
SRP54-201ENST00000216774 ZNF76P36508 570 aa14.47□□□□□ -0.09
SRP54-201ENST00000216774 HDLBPQ00341 1268 aaKnown RBP14.47□□□□□ -0.09
SRP54-201ENST00000216774 PPP2R5EQ16537 467 aa14.47□□□□□ -0.09
SRP54-201ENST00000216774 SHROOM1Q2M3G4 852 aaPredicted RBP14.47□□□□□ -0.09
SRP54-201ENST00000216774 SLC27A3Q5K4L6 730 aa14.47□□□□□ -0.09
SRP54-201ENST00000216774 ICE2Q659A1 982 aa14.47□□□□□ -0.09
SRP54-201ENST00000216774 GJB7Q6PEY0 223 aa14.47□□□□□ -0.09
SRP54-201ENST00000216774 NLRP14Q86W24 1093 aa14.47□□□□□ -0.09
SRP54-201ENST00000216774 LNX1Q8TBB1 728 aaPredicted RBP14.47□□□□□ -0.09
SRP54-201ENST00000216774 ZNF473Q8WTR7 871 aaKnown RBP14.47□□□□□ -0.09
SRP54-201ENST00000216774 FAM196BA6NMK8 535 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 G3V3G9 751 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 OPLAHO14841 1288 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 MUTP22033 750 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 FMO5P49326 533 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 TCP10Q12799 353 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 TRAF1Q13077 416 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 IKQ13123 557 aaPredicted RBP14.46□□□□□ -0.09
SRP54-201ENST00000216774 PPP2R5AQ15172 486 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 CLUL1Q15846 466 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 SPDYCQ5MJ68 293 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 DCAF8Q5TAQ9 597 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 AGBL2Q5U5Z8 902 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 MMS22LQ6ZRQ5 1243 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 STXBP4Q6ZWJ1 553 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 C1orf186Q6ZWK4 172 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 DDX42Q86XP3 938 aaKnown RBP eCLIP14.46□□□□□ -0.09
SRP54-201ENST00000216774 DNAAF5Q86Y56 855 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 SUGP1Q8IWZ8 645 aaKnown RBP14.46□□□□□ -0.09
SRP54-201ENST00000216774 MYCT1Q8N699 235 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 MYCBPAPQ8TBZ2 947 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 CCT8L2Q96SF2 557 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 NAP1L3Q99457 506 aaPredicted RBP14.46□□□□□ -0.09
SRP54-201ENST00000216774 SYT11Q9BT88 431 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 NEUROG2Q9H2A3 272 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 PARVGQ9HBI0 331 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 RGL1Q9NZL6 768 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 FAM198AQ9UFP1 575 aa14.46□□□□□ -0.09
SRP54-201ENST00000216774 AMACRQ9UHK6 382 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms