RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 MOB2Q70IA6 237 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 MAEAQ7L5Y9 396 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 OPTNQ96CV9 577 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 NHEJ1Q9H9Q4 299 aaPredicted RBP19.11■□□□□ 0.65
VRK1-201ENST00000216639 GABBR1Q9UBS5 961 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 FRMD4BQ9Y2L6 1034 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 SCN4AP35499 1836 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 GRIN3BO60391 1043 aa19.1■□□□□ 0.65
VRK1-201ENST00000216639 SLU7O95391 586 aaKnown RBP19.1■□□□□ 0.65
VRK1-201ENST00000216639 MYBPC2Q14324 1141 aa19.1■□□□□ 0.65
VRK1-201ENST00000216639 UTP14CQ5TAP6 766 aaKnown RBP19.1■□□□□ 0.65
VRK1-201ENST00000216639 RRAGAQ7L523 313 aa19.1■□□□□ 0.65
VRK1-201ENST00000216639 CCDC42Q96M95 316 aa19.1■□□□□ 0.65
VRK1-201ENST00000216639 PAGR1Q9BTK6 254 aa19.1■□□□□ 0.65
VRK1-201ENST00000216639 LSM14BQ9BX40 385 aaKnown RBP19.1■□□□□ 0.65
VRK1-201ENST00000216639 STRA6Q9BX79 667 aa19.1■□□□□ 0.65
VRK1-201ENST00000216639 CGNQ9P2M7 1197 aaKnown RBP19.1■□□□□ 0.65
VRK1-201ENST00000216639 MYO1AQ9UBC5 1043 aa19.1■□□□□ 0.65
VRK1-201ENST00000216639 EIF3CLB5ME19 914 aaKnown RBP19.09■□□□□ 0.65
VRK1-201ENST00000216639 EPHB6O15197 1021 aa19.09■□□□□ 0.65
VRK1-201ENST00000216639 PPP1R37O75864 691 aa19.09■□□□□ 0.65
VRK1-201ENST00000216639 FAM186BQ8IYM0 893 aa19.09■□□□□ 0.65
VRK1-201ENST00000216639 CCDC155Q8N6L0 562 aa19.09■□□□□ 0.65
VRK1-201ENST00000216639 ACCSQ96QU6 501 aa19.09■□□□□ 0.65
VRK1-201ENST00000216639 EIF3CQ99613 913 aaKnown RBP19.09■□□□□ 0.65
VRK1-201ENST00000216639 ST6GALNAC4Q9H4F1 302 aa19.09■□□□□ 0.65
VRK1-201ENST00000216639 AGPAT3Q9NRZ7 376 aa19.09■□□□□ 0.65
VRK1-201ENST00000216639 MYH11P35749 1972 aa19.09■□□□□ 0.65
VRK1-201ENST00000216639 LRRC53A6NM62 1247 aa19.08■□□□□ 0.65
VRK1-201ENST00000216639 URI1O94763 535 aaPredicted RBP19.08■□□□□ 0.65
VRK1-201ENST00000216639 ACTR2P61160 394 aa19.08■□□□□ 0.65
VRK1-201ENST00000216639 CNTN2Q02246 1040 aa19.08■□□□□ 0.65
VRK1-201ENST00000216639 DCAF17Q5H9S7 520 aaPredicted RBP19.08■□□□□ 0.65
VRK1-201ENST00000216639 TCERG1LQ5VWI1 586 aa19.08■□□□□ 0.65
VRK1-201ENST00000216639 SWSAP1Q6NVH7 229 aa19.08■□□□□ 0.65
VRK1-201ENST00000216639 PDXDC1Q6P996 788 aa19.08■□□□□ 0.65
VRK1-201ENST00000216639 BAP1Q92560 729 aa19.08■□□□□ 0.65
VRK1-201ENST00000216639 SYN2Q92777 582 aaPredicted RBP19.08■□□□□ 0.65
VRK1-201ENST00000216639 HAUS4Q9H6D7 363 aa19.08■□□□□ 0.65
VRK1-201ENST00000216639 UNCXA6NJT0 531 aa19.08■□□□□ 0.64
VRK1-201ENST00000216639 SMTNP53814 917 aa19.08■□□□□ 0.64
VRK1-201ENST00000216639 SNRPFP62306 86 aaKnown RBP19.08■□□□□ 0.64
VRK1-201ENST00000216639 SPA17Q15506 151 aa19.08■□□□□ 0.64
VRK1-201ENST00000216639 FAM102BQ5T8I3 360 aa19.08■□□□□ 0.64
VRK1-201ENST00000216639 PLA2G4FQ68DD2 849 aa19.08■□□□□ 0.64
VRK1-201ENST00000216639 ANO5Q75V66 913 aa19.08■□□□□ 0.64
VRK1-201ENST00000216639 KIAA1328Q86T90 577 aa19.08■□□□□ 0.64
VRK1-201ENST00000216639 SLC9A9Q8IVB4 645 aa19.08■□□□□ 0.64
VRK1-201ENST00000216639 ERO1AQ96HE7 468 aa19.08■□□□□ 0.64
VRK1-201ENST00000216639 CEP170P1Q96L14 293 aa19.08■□□□□ 0.64
VRK1-201ENST00000216639 DEF6Q9H4E7 631 aa19.08■□□□□ 0.64
VRK1-201ENST00000216639 KIAA1217Q5T5P2 1943 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 CASP4P49662 377 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 NPEPPSP55786 919 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 SNAPC2Q13487 334 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 LDLRAD1Q5T700 205 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 ABHD15Q6UXT9 468 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 ZNF662Q6ZS27 426 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 TRMT1LQ7Z2T5 733 aaKnown RBP19.07■□□□□ 0.64
VRK1-201ENST00000216639 KSR1Q8IVT5 923 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 KIFAP3Q92845 792 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 WDR24Q96S15 920 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 CRACR2AQ9BSW2 395 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 C17orf75Q9HAS0 396 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 PLCB1Q9NQ66 1216 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 DMAC2Q9NW81 257 aa19.07■□□□□ 0.64
VRK1-201ENST00000216639 LCTP09848 1927 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 GTPBP10A4D1E9 387 aaKnown RBP19.06■□□□□ 0.64
VRK1-201ENST00000216639 TMEM150BA6NC51 233 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 CNMDO75829 334 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 DGAT1O75907 488 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 SUPT20HL2P0C7V6 817 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 POLR2FP61218 127 aaKnown RBP19.06■□□□□ 0.64
VRK1-201ENST00000216639 GTF2BQ00403 316 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 SP4Q02446 784 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 DMP1Q13316 513 aaPredicted RBP19.06■□□□□ 0.64
VRK1-201ENST00000216639 EXOC3L4Q17RC7 722 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 SFMBT2Q5VUG0 894 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 GBP6Q6ZN66 633 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 SEPT14Q6ZU15 432 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.06■□□□□ 0.64
VRK1-201ENST00000216639 HAUS6Q7Z4H7 955 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 MCPH1Q8NEM0 835 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 SLC35C1Q96A29 364 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 HVCN1Q96D96 273 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 SLC10A4Q96EP9 437 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 EXOC7Q9UPT5 735 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 CLEC11AQ9Y240 323 aa19.06■□□□□ 0.64
VRK1-201ENST00000216639 KRT86O43790 486 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 NOL4O94818 638 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 EDNRBP24530 442 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 CYP2J2P51589 502 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 NCKAP1LP55160 1127 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 PEX3P56589 373 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 PPP2R5AQ15172 486 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 SLC9C1Q4G0N8 1177 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 XKR3Q5GH77 459 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 ZNF569Q5MCW4 686 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 TXLNBQ8N3L3 684 aa19.05■□□□□ 0.64
VRK1-201ENST00000216639 FAM133AQ8N9E0 248 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms