RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 COPB2P35606 906 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 CASP4P49662 377 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 ACTR2P61160 394 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 KCNH2Q12809 1159 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 XKR9Q5GH70 373 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 PLA2G4FQ68DD2 849 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 MAEAQ7L5Y9 396 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 KSR1Q8IVT5 923 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 BAP1Q92560 729 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 BORCS6Q96GS4 357 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 DRC1Q96MC2 740 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 CCDC43Q96MW1 224 aaKnown RBP20.43■□□□□ 0.86
CTSA-201ENST00000191018 SH2D3AQ9BRG2 576 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 GBP3Q9H0R5 595 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 ST6GALNAC4Q9H4F1 302 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 DMAC2Q9NW81 257 aa20.43■□□□□ 0.86
CTSA-201ENST00000191018 EPN1Q9Y6I3 576 aaPredicted RBP20.43■□□□□ 0.86
CTSA-201ENST00000191018 FANCGO15287 622 aa20.42■□□□□ 0.86
CTSA-201ENST00000191018 NDUFA10O95299 355 aa20.42■□□□□ 0.86
CTSA-201ENST00000191018 OSBPP22059 807 aa20.42■□□□□ 0.86
CTSA-201ENST00000191018 NPEPPSP55786 919 aa20.42■□□□□ 0.86
CTSA-201ENST00000191018 CCDC60Q8IWA6 550 aaPredicted RBP20.42■□□□□ 0.86
CTSA-201ENST00000191018 ACRBPQ8NEB7 543 aa20.42■□□□□ 0.86
CTSA-201ENST00000191018 NEK11Q8NG66 645 aa20.42■□□□□ 0.86
CTSA-201ENST00000191018 MKNK1Q9BUB5 465 aa20.42■□□□□ 0.86
CTSA-201ENST00000191018 R3HDMLQ9H3Y0 253 aa20.42■□□□□ 0.86
CTSA-201ENST00000191018 ZNHIT6Q9NWK9 470 aaKnown RBP20.42■□□□□ 0.86
CTSA-201ENST00000191018 DYNC1I1O14576 645 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 NOL4O94818 638 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 ATG7O95352 703 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 POTEJP0CG39 1038 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 EPB41P11171 864 aaKnown RBP20.41■□□□□ 0.86
CTSA-201ENST00000191018 SWSAP1Q6NVH7 229 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 OTUD6AQ7L8S5 288 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 HS2ST1Q7LGA3 356 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 SLC9A9Q8IVB4 645 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 GOLGA5Q8TBA6 731 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 TMEM174Q8WUU8 243 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 AGPAT3Q9NRZ7 376 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 DNAI1Q9UI46 699 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 IGSF9BQ9UPX0 1349 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 A0A0U1RQJ8 604 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 K7ENM7 598 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 CTIFO43310 598 aaKnown RBP20.41■□□□□ 0.86
CTSA-201ENST00000191018 SNAPC2Q13487 334 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 MYBPC2Q14324 1141 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 Q3C1V9 767 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 ATRIPQ8WXE1 791 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 L2HGDHQ9H9P8 463 aa20.41■□□□□ 0.86
CTSA-201ENST00000191018 REXO2Q9Y3B8 237 aaKnown RBP20.41■□□□□ 0.86
CTSA-201ENST00000191018 SUPT20HL2P0C7V6 817 aa20.4■□□□□ 0.86
CTSA-201ENST00000191018 XRCC5P13010 732 aaKnown RBP20.4■□□□□ 0.86
CTSA-201ENST00000191018 NCKAP1LP55160 1127 aa20.4■□□□□ 0.86
CTSA-201ENST00000191018 GTF2BQ00403 316 aa20.4■□□□□ 0.86
CTSA-201ENST00000191018 CCDC170Q8IYT3 715 aa20.4■□□□□ 0.86
CTSA-201ENST00000191018 SLC35C1Q96A29 364 aa20.4■□□□□ 0.86
CTSA-201ENST00000191018 CEP72Q9P209 647 aa20.4■□□□□ 0.86
CTSA-201ENST00000191018 ZNFX1Q9P2E3 1918 aaKnown RBP20.4■□□□□ 0.86
CTSA-201ENST00000191018 AFPP02771 609 aaKnown RBP20.39■□□□□ 0.86
CTSA-201ENST00000191018 PSMC2P35998 433 aaKnown RBP20.39■□□□□ 0.86
CTSA-201ENST00000191018 MIS18BP1Q6P0N0 1132 aa20.39■□□□□ 0.86
CTSA-201ENST00000191018 SLC10A4Q96EP9 437 aa20.39■□□□□ 0.86
CTSA-201ENST00000191018 TMEM206Q9H813 350 aa20.39■□□□□ 0.86
CTSA-201ENST00000191018 GPRC5CQ9NQ84 441 aa20.39■□□□□ 0.86
CTSA-201ENST00000191018 SYNGAP1Q96PV0 1343 aa20.39■□□□□ 0.85
CTSA-201ENST00000191018 DNAJC25-GNG10A0A024R161 153 aa20.39■□□□□ 0.85
CTSA-201ENST00000191018 GNG11P61952 73 aa20.39■□□□□ 0.85
CTSA-201ENST00000191018 MAP1SQ66K74 1059 aaPredicted RBP20.39■□□□□ 0.85
CTSA-201ENST00000191018 PDXDC1Q6P996 788 aa20.39■□□□□ 0.85
CTSA-201ENST00000191018 SEPT14Q6ZU15 432 aa20.39■□□□□ 0.85
CTSA-201ENST00000191018 CYFIP1Q7L576 1253 aa20.39■□□□□ 0.85
CTSA-201ENST00000191018 SLC17A8Q8NDX2 589 aa20.39■□□□□ 0.85
CTSA-201ENST00000191018 FGD4Q96M96 766 aa20.39■□□□□ 0.85
CTSA-201ENST00000191018 WDR24Q96S15 920 aa20.39■□□□□ 0.85
CTSA-201ENST00000191018 LSM14BQ9BX40 385 aaKnown RBP20.39■□□□□ 0.85
CTSA-201ENST00000191018 NHEJ1Q9H9Q4 299 aaPredicted RBP20.39■□□□□ 0.85
CTSA-201ENST00000191018 LZTFL1Q9NQ48 299 aa20.39■□□□□ 0.85
CTSA-201ENST00000191018 PDLIM7Q9NR12 457 aa20.39■□□□□ 0.85
CTSA-201ENST00000191018 CLEC11AQ9Y240 323 aa20.39■□□□□ 0.85
CTSA-201ENST00000191018 LRRC53A6NM62 1247 aa20.38■□□□□ 0.85
CTSA-201ENST00000191018 UBA1P22314 1058 aaKnown RBP20.38■□□□□ 0.85
CTSA-201ENST00000191018 ARHGAP25P42331 645 aa20.38■□□□□ 0.85
CTSA-201ENST00000191018 PRKCEQ02156 737 aa20.38■□□□□ 0.85
CTSA-201ENST00000191018 SP4Q02446 784 aa20.38■□□□□ 0.85
CTSA-201ENST00000191018 DPY19L2P1Q6NXN4 242 aa20.38■□□□□ 0.85
CTSA-201ENST00000191018 TRMT1LQ7Z2T5 733 aaKnown RBP20.38■□□□□ 0.85
CTSA-201ENST00000191018 HAUS6Q7Z4H7 955 aa20.38■□□□□ 0.85
CTSA-201ENST00000191018 C12orf56Q8IXR9 622 aa20.38■□□□□ 0.85
CTSA-201ENST00000191018 FAM186BQ8IYM0 893 aa20.38■□□□□ 0.85
CTSA-201ENST00000191018 CEP170P1Q96L14 293 aa20.38■□□□□ 0.85
CTSA-201ENST00000191018 CRACR2AQ9BSW2 395 aa20.38■□□□□ 0.85
CTSA-201ENST00000191018 MAFBQ9Y5Q3 323 aaPredicted RBP20.38■□□□□ 0.85
CTSA-201ENST00000191018 IGKV6D-21A0A0A0MT36 114 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 EIF3CLB5ME19 914 aaKnown RBP20.37■□□□□ 0.85
CTSA-201ENST00000191018 TGFB3P10600 412 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 CYLC1P35663 651 aaPredicted RBP20.37■□□□□ 0.85
CTSA-201ENST00000191018 PEX3P56589 373 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 RRAGAQ7L523 313 aa20.37■□□□□ 0.85
CTSA-201ENST00000191018 ZNF526Q8TF50 670 aaPredicted RBP20.37■□□□□ 0.85
CTSA-201ENST00000191018 ACCSQ96QU6 501 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms