RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ASPMQ8IZT6 3477 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 WDFY3Q8IZQ1 3526 aa8.49□□□□□ -1.05
PHGDH-225ENST00000641720 FRYQ5TBA9 3013 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 C17orf102A2RUQ5 167 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 H3BRB1 525 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 ENPP3O14638 875 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 GALR2O43603 387 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-225ENST00000641720 CTDNEP1O95476 244 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 ATF7P17544 494 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-225ENST00000641720 GNAQP50148 359 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 MRPS9P82933 396 aaKnown RBP8.48□□□□□ -1.05
PHGDH-225ENST00000641720 PGM5Q15124 567 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 PTPN21Q16825 1174 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 RUFY4Q6ZNE9 571 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 EP400NLQ6ZTU2 488 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 DHX37Q8IY37 1157 aaKnown RBP8.48□□□□□ -1.05
PHGDH-225ENST00000641720 FIBCD1Q8N539 461 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 TMEM105Q8N8V8 129 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 APBB2Q92870 758 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 ATP6V0A1Q93050 837 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 PHF7Q9BWX1 381 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-225ENST00000641720 TUT1Q9H6E5 874 aaKnown RBP8.48□□□□□ -1.05
PHGDH-225ENST00000641720 AGO3Q9H9G7 860 aaKnown RBP8.48□□□□□ -1.05
PHGDH-225ENST00000641720 LIMCH1Q9UPQ0 1083 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 MRVI1Q9Y6F6 885 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 CACNA1GO43497 2377 aa8.48□□□□□ -1.05
PHGDH-225ENST00000641720 ZZEF1O43149 2961 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 PNMA6FA0A0J9YX94 578 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 MBLAC1A4D2B0 266 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-225ENST00000641720 H0Y858 1186 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 FSCN2O14926 492 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 SORBS3O60504 671 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 JAK2O60674 1132 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 IFNAR1P17181 557 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 SMARCA1P28370 1054 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 NUBP1P53384 320 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 FBXO47Q5MNV8 452 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 MARCH8Q5T0T0 291 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 WWC2Q6AWC2 1192 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 TYW1BQ6NUM6 668 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 SYCE2Q6PIF2 218 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 ERMP1Q7Z2K6 904 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 CCDC83Q8IWF9 413 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 RRP36Q96EU6 259 aaKnown RBP8.47□□□□□ -1.05
PHGDH-225ENST00000641720 ZFP91Q96JP5 570 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-225ENST00000641720 SPATA33Q96N06 139 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 INPP4AQ96PE3 977 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-225ENST00000641720 MPHOSPH6Q99547 160 aaKnown RBP8.47□□□□□ -1.05
PHGDH-225ENST00000641720 SLC26A6Q9BXS9 759 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 SLKQ9H2G2 1235 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-225ENST00000641720 SMOC2Q9H3U7 446 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 TLR9Q9NR96 1032 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 SETD4Q9NVD3 440 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 CDH22Q9UJ99 828 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 RWDD3Q9Y3V2 267 aa8.47□□□□□ -1.05
PHGDH-225ENST00000641720 CNOT1A5YKK6 2376 aaKnown RBP8.47□□□□□ -1.05
PHGDH-225ENST00000641720 NOTCH4Q99466 2003 aa8.46□□□□□ -1.05
PHGDH-225ENST00000641720 CCDC196A0A1B0GTZ2 297 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 B4DLN1 442 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 ADAMTS3O15072 1205 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 TGFB3P10600 412 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 GHRP10912 638 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 NRIP1P48552 1158 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 GATMP50440 423 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 MRPL12P52815 198 aaKnown RBP8.46□□□□□ -1.06
PHGDH-225ENST00000641720 DUSP6Q16828 381 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 TMEM184AQ6ZMB5 413 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 HEATR3Q7Z4Q2 680 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 SUGP1Q8IWZ8 645 aaKnown RBP8.46□□□□□ -1.06
PHGDH-225ENST00000641720 CMTR2Q8IYT2 770 aaKnown RBP8.46□□□□□ -1.06
PHGDH-225ENST00000641720 KLHL23Q8NBE8 558 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 NSUN7Q8NE18 718 aaKnown RBP8.46□□□□□ -1.06
PHGDH-225ENST00000641720 FEZF2Q8TBJ5 459 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 POF1BQ8WVV4 589 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 TMX3Q96JJ7 454 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 RIPOR3Q96MK2 946 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 AIFM3Q96NN9 605 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 GPR20Q99678 358 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 AMNQ9BXJ7 453 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 IGFLR1Q9H665 355 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 HCSTQ9UBK5 93 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 SEC63Q9UGP8 760 aaKnown RBP8.46□□□□□ -1.06
PHGDH-225ENST00000641720 PCDHA1Q9Y5I3 950 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 V9GY48 417 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-225ENST00000641720 STK36Q9NRP7 1315 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 COL4A3Q01955 1670 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 RALGAPA1Q6GYQ0 2036 aa8.46□□□□□ -1.06
PHGDH-225ENST00000641720 MED19A0JLT2 244 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-225ENST00000641720 CPLX1O14810 134 aa8.45□□□□□ -1.06
PHGDH-225ENST00000641720 PRPF3O43395 683 aaKnown RBP8.45□□□□□ -1.06
PHGDH-225ENST00000641720 BRD1O95696 1058 aa8.45□□□□□ -1.06
PHGDH-225ENST00000641720 SCG2P13521 617 aa8.45□□□□□ -1.06
PHGDH-225ENST00000641720 NDUFV1P49821 464 aa8.45□□□□□ -1.06
PHGDH-225ENST00000641720 PFKFB3Q16875 520 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-225ENST00000641720 NAALADL2Q58DX5 795 aa8.45□□□□□ -1.06
PHGDH-225ENST00000641720 ARHGEF16Q5VV41 709 aa8.45□□□□□ -1.06
PHGDH-225ENST00000641720 CWF19L1Q69YN2 538 aaKnown RBP8.45□□□□□ -1.06
PHGDH-225ENST00000641720 METTL7BQ6UX53 244 aa8.45□□□□□ -1.06
PHGDH-225ENST00000641720 RNF26Q9BY78 433 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-225ENST00000641720 TMX1Q9H3N1 280 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms