RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 TMEM150BA6NC51 233 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 N4BP3O15049 544 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 ARHGAP6O43182 974 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 USO1O60763 962 aaKnown RBP9.78□□□□□ -0.84
PHGDH-219ENST00000641513 HIP1RO75146 1068 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 GCNT3O95395 438 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 FGFR1OPO95684 399 aaKnown RBP9.78□□□□□ -0.84
PHGDH-219ENST00000641513 SUPT20HL2P0C7V6 817 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 ICAM3P32942 547 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 MTIF2P46199 727 aaKnown RBP9.78□□□□□ -0.84
PHGDH-219ENST00000641513 SP2Q02086 613 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 EHHADHQ08426 723 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 TBX2Q13207 712 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-219ENST00000641513 NEDD9Q14511 834 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 KRT31Q15323 416 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 TAF1CQ15572 869 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-219ENST00000641513 PTPN21Q16825 1174 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 TCP11X2Q5H9J9 407 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 UTP14CQ5TAP6 766 aaKnown RBP9.78□□□□□ -0.84
PHGDH-219ENST00000641513 PLA2G4FQ68DD2 849 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 TTI2Q6NXR4 508 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.78□□□□□ -0.84
PHGDH-219ENST00000641513 OTUD6AQ7L8S5 288 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 DPP9Q86TI2 863 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 FBXO16Q8IX29 292 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-219ENST00000641513 C4orf19Q8IY42 314 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 ERO1AQ96HE7 468 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 DUSP9Q99956 384 aaKnown RBP9.78□□□□□ -0.84
PHGDH-219ENST00000641513 SH2D3AQ9BRG2 576 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 SEMA6BQ9H3T3 888 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 L2HGDHQ9H9P8 463 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 MLXIPQ9HAP2 919 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 KCND2Q9NZV8 630 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 CGNQ9P2M7 1197 aaKnown RBP9.78□□□□□ -0.84
PHGDH-219ENST00000641513 MORF4L1Q9UBU8 362 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 SEPT9Q9UHD8 586 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-219ENST00000641513 CPA4Q9UI42 421 aa9.78□□□□□ -0.84
PHGDH-219ENST00000641513 DBR1Q9UK59 544 aaKnown RBP9.78□□□□□ -0.84
PHGDH-219ENST00000641513 ZNF236Q9UL36 1845 aa9.77□□□□□ -0.84
PHGDH-219ENST00000641513 DNAJC25-GNG10A0A024R161 153 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 ZSCAN12O43309 604 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 STRNO43815 780 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 STX10O60499 249 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 PRPF6O94906 941 aaKnown RBP9.77□□□□□ -0.85
PHGDH-219ENST00000641513 LYPLA2O95372 231 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 SLC34A2O95436 690 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 GGPS1O95749 300 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 MYBP10242 640 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 PRKCSHP14314 528 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-219ENST00000641513 UBA1P22314 1058 aaKnown RBP9.77□□□□□ -0.85
PHGDH-219ENST00000641513 EDNRBP24530 442 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 ADORA2AP29274 412 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 RARRES1P49788 294 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 COPB1P53618 953 aaKnown RBP9.77□□□□□ -0.85
PHGDH-219ENST00000641513 LRRC63Q05C16 580 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 LY6KQ17RY6 165 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 FAM102BQ5T8I3 360 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 E4F1Q66K89 784 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-219ENST00000641513 CENPPQ6IPU0 288 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 KCNV1Q6PIU1 500 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 STXBP4Q6ZWJ1 553 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 PLEKHH3Q7Z736 793 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 SAPCD2Q86UD0 394 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 FAM178BQ8IXR5 827 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 SMC1BQ8NDV3 1235 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 EEF2KMTQ96G04 330 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 CEP170P1Q96L14 293 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 FGD4Q96M96 766 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 NAA15Q9BXJ9 866 aaKnown RBP9.77□□□□□ -0.85
PHGDH-219ENST00000641513 FGFBP2Q9BYJ0 223 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 PARVGQ9HBI0 331 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 ZNF302Q9NR11 478 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 ANKEF1Q9NU02 776 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 LIMA1Q9UHB6 759 aaKnown RBP9.77□□□□□ -0.85
PHGDH-219ENST00000641513 ODF2LQ9ULJ1 636 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 TELO2Q9Y4R8 837 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 ITIH6Q6UXX5 1313 aa9.77□□□□□ -0.85
PHGDH-219ENST00000641513 A0A1B0GTH6 734 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 IGF2BP3O00425 579 aaKnown RBP eCLIP9.76□□□□□ -0.85
PHGDH-219ENST00000641513 NOP56O00567 594 aaKnown RBP9.76□□□□□ -0.85
PHGDH-219ENST00000641513 SLC10A3P09131 477 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 GUCY2CP25092 1073 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 EEF1GP26641 437 aaKnown RBP9.76□□□□□ -0.85
PHGDH-219ENST00000641513 NMT1P30419 496 aaKnown RBP9.76□□□□□ -0.85
PHGDH-219ENST00000641513 MAPK4P31152 587 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 CASP5P51878 434 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 NPEPPSP55786 919 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 PRKCEQ02156 737 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 FAM110CQ1W6H9 321 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 MTERF2Q49AM1 385 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 CCDC40Q4G0X9 1142 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 ODR4Q5SWX8 454 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 FAM160B1Q5W0V3 765 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 ABHD15Q6UXT9 468 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 ARMCX2Q7L311 632 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 GPR142Q7Z601 462 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 CCDC60Q8IWA6 550 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-219ENST00000641513 DHX37Q8IY37 1157 aaKnown RBP9.76□□□□□ -0.85
PHGDH-219ENST00000641513 SCFD1Q8WVM8 642 aa9.76□□□□□ -0.85
PHGDH-219ENST00000641513 CCDC51Q96ER9 411 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms