RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 MRPS27Q92552 414 aaKnown RBP9.44□□□□□ -0.9
SCARB2-226ENST00000640916 ADAM33Q9BZ11 813 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 TYW1Q9NV66 732 aaKnown RBP9.44□□□□□ -0.9
SCARB2-226ENST00000640916 DLGAP2Q9P1A6 1054 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 PADI3Q9ULW8 664 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 DUSP12Q9UNI6 340 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 LZTS1Q9Y250 596 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 USTQ9Y2C2 406 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 PCDHB12Q9Y5F1 795 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 HCFC2Q9Y5Z7 792 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 NRCAMQ92823 1304 aa9.44□□□□□ -0.9
SCARB2-226ENST00000640916 CCDC171Q6TFL3 1326 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 DCDC2BA2VCK2 349 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 NARSO43776 548 aaKnown RBP9.43□□□□□ -0.9
SCARB2-226ENST00000640916 PPP1R11O60927 126 aaPredicted RBP9.43□□□□□ -0.9
SCARB2-226ENST00000640916 EOMESO95936 686 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 CFBP00751 764 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 STAG3L1P0CL83 205 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 SRGAP2BP0DMP2 458 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 TGM1P22735 817 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 MTHFRP42898 656 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 MRPS9P82933 396 aaKnown RBP9.43□□□□□ -0.9
SCARB2-226ENST00000640916 PLCB3Q01970 1234 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 TDGQ13569 410 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 VARS2Q5ST30 1063 aaKnown RBP9.43□□□□□ -0.9
SCARB2-226ENST00000640916 KIAA0319Q5VV43 1072 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 CES5AQ6NT32 575 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 TAF2Q6P1X5 1199 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 METTL7BQ6UX53 244 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 LRRC55Q6ZSA7 311 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 MAML2Q8IZL2 1156 aaPredicted RBP9.43□□□□□ -0.9
SCARB2-226ENST00000640916 ZNF687Q8N1G0 1237 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 ZNF454Q8N9F8 522 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 CASP10Q92851 521 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 TCF25Q9BQ70 676 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 HINFPQ9BQA5 517 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 MRPL11Q9Y3B7 192 aaKnown RBP9.43□□□□□ -0.9
SCARB2-226ENST00000640916 SQORQ9Y6N5 450 aa9.43□□□□□ -0.9
SCARB2-226ENST00000640916 PATJQ8NI35 1801 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 POTEMA6NI47 508 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 CLASP2O75122 1294 aaKnown RBP9.42□□□□□ -0.9
SCARB2-226ENST00000640916 HOXA13P31271 388 aaPredicted RBP9.42□□□□□ -0.9
SCARB2-226ENST00000640916 SARSP49591 514 aaKnown RBP9.42□□□□□ -0.9
SCARB2-226ENST00000640916 MRPS6P82932 125 aaKnown RBP9.42□□□□□ -0.9
SCARB2-226ENST00000640916 NBR1Q14596 966 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 GPATCH4Q5T3I0 446 aaKnown RBP9.42□□□□□ -0.9
SCARB2-226ENST00000640916 UTP14CQ5TAP6 766 aaKnown RBP9.42□□□□□ -0.9
SCARB2-226ENST00000640916 KIAA1841Q6NSI8 718 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 POTEGQ6S5H5 508 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 CYFIP1Q7L576 1253 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 THNSL1Q8IYQ7 743 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 ZDHHC16Q969W1 377 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 TTC14Q96N46 770 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 FTHL17Q9BXU8 183 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 JMJD4Q9H9V9 463 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 CYP26B1Q9NR63 512 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 ZBTB40Q9NUA8 1239 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 DOCK8Q8NF50 2099 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 SPEGQ15772 3267 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 FRYQ5TBA9 3013 aa9.42□□□□□ -0.9
SCARB2-226ENST00000640916 PKD1L2Q7Z442 2459 aa9.41□□□□□ -0.9
SCARB2-226ENST00000640916 FAM208BQ5VWN6 2430 aa9.41□□□□□ -0.9
SCARB2-226ENST00000640916 IGSF9BQ9UPX0 1349 aa9.41□□□□□ -0.9
SCARB2-226ENST00000640916 FAM205CA6NFA0 338 aa9.41□□□□□ -0.9
SCARB2-226ENST00000640916 C2orf71A6NGG8 1288 aa9.41□□□□□ -0.9
SCARB2-226ENST00000640916 TBKBP1A7MCY6 615 aa9.41□□□□□ -0.9
SCARB2-226ENST00000640916 SPATA31C2B4DYI2 1134 aa9.41□□□□□ -0.9
SCARB2-226ENST00000640916 NOP56O00567 594 aaKnown RBP9.41□□□□□ -0.9
SCARB2-226ENST00000640916 ALX1Q15699 326 aa9.41□□□□□ -0.9
SCARB2-226ENST00000640916 GRIK4Q16099 956 aa9.41□□□□□ -0.9
SCARB2-226ENST00000640916 RRP12Q5JTH9 1297 aaKnown RBP9.41□□□□□ -0.9
SCARB2-226ENST00000640916 RARS2Q5T160 578 aaKnown RBP9.41□□□□□ -0.9
SCARB2-226ENST00000640916 MRPL43Q8N983 215 aaKnown RBP9.41□□□□□ -0.9
SCARB2-226ENST00000640916 INPP4AQ96PE3 977 aaPredicted RBP9.41□□□□□ -0.9
SCARB2-226ENST00000640916 LRRCC1Q9C099 1032 aa9.41□□□□□ -0.9
SCARB2-226ENST00000640916 KCNK12Q9HB15 430 aa9.41□□□□□ -0.9
SCARB2-226ENST00000640916 NGRNQ9NPE2 291 aaKnown RBP9.41□□□□□ -0.9
SCARB2-226ENST00000640916 RNF19AQ9NV58 838 aa9.41□□□□□ -0.9
SCARB2-226ENST00000640916 TUBE1Q9UJT0 475 aa9.41□□□□□ -0.9
SCARB2-226ENST00000640916 COL4A3Q01955 1670 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 C9IYK1 514 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 HMMRO75330 724 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 DCNP07585 359 aaKnown RBP9.4□□□□□ -0.9
SCARB2-226ENST00000640916 GLULP15104 373 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 PBX3P40426 434 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 TMEM62Q0P6H9 643 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 PPFIA1Q13136 1202 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 TMEM266Q2M3C6 531 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 SPOUT1Q5T280 376 aaKnown RBP9.4□□□□□ -0.9
SCARB2-226ENST00000640916 RSPH3Q86UC2 560 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 SLC22A17Q8WUG5 538 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 MTMR8Q96EF0 704 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 NPDC1Q9NQX5 325 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-226ENST00000640916 ENTPD7Q9NQZ7 604 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 MAP3K20Q9NYL2 800 aaKnown RBP9.4□□□□□ -0.9
SCARB2-226ENST00000640916 WNT16Q9UBV4 365 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 DBR1Q9UK59 544 aaKnown RBP9.4□□□□□ -0.9
SCARB2-226ENST00000640916 ZNF215Q9UL58 517 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-226ENST00000640916 LRFN2Q9ULH4 789 aa9.4□□□□□ -0.9
SCARB2-226ENST00000640916 PCDHB7Q9Y5E2 793 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms