RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 CMTR2Q8IYT2 770 aaKnown RBP19.14■□□□□ 0.65
SMN2-216ENST00000638794 KIAA0319LQ8IZA0 1049 aa19.14■□□□□ 0.65
SMN2-216ENST00000638794 GJD3Q8N144 294 aa19.14■□□□□ 0.65
SMN2-216ENST00000638794 RASGRP4Q8TDF6 673 aa19.14■□□□□ 0.65
SMN2-216ENST00000638794 LRFN3Q9BTN0 628 aa19.14■□□□□ 0.65
SMN2-216ENST00000638794 AGXT2Q9BYV1 514 aa19.14■□□□□ 0.65
SMN2-216ENST00000638794 TBC1D22BQ9NU19 505 aa19.14■□□□□ 0.65
SMN2-216ENST00000638794 MMP1P03956 469 aa19.13■□□□□ 0.65
SMN2-216ENST00000638794 STAG3L1P0CL83 205 aa19.13■□□□□ 0.65
SMN2-216ENST00000638794 GNA11P29992 359 aa19.13■□□□□ 0.65
SMN2-216ENST00000638794 LTBRP36941 435 aa19.13■□□□□ 0.65
SMN2-216ENST00000638794 HYAL1Q12794 435 aa19.13■□□□□ 0.65
SMN2-216ENST00000638794 NFX1Q12986 1120 aaKnown RBP19.13■□□□□ 0.65
SMN2-216ENST00000638794 PRR16Q569H4 304 aa19.13■□□□□ 0.65
SMN2-216ENST00000638794 ZNF484Q5JVG2 852 aa19.13■□□□□ 0.65
SMN2-216ENST00000638794 ZNF746Q6NUN9 644 aaPredicted RBP19.13■□□□□ 0.65
SMN2-216ENST00000638794 TMEM40Q8WWA1 233 aa19.13■□□□□ 0.65
SMN2-216ENST00000638794 CDHR5Q9HBB8 845 aa19.13■□□□□ 0.65
SMN2-216ENST00000638794 ALG13Q9NP73 1137 aaKnown RBP19.13■□□□□ 0.65
SMN2-216ENST00000638794 C11orf16Q9NQ32 467 aa19.13■□□□□ 0.65
SMN2-216ENST00000638794 PLAGL2Q9UPG8 496 aa19.13■□□□□ 0.65
SMN2-216ENST00000638794 NOC2LQ9Y3T9 749 aaKnown RBP19.13■□□□□ 0.65
SMN2-216ENST00000638794 FNDC1Q4ZHG4 1894 aaPredicted RBP19.13■□□□□ 0.65
SMN2-216ENST00000638794 NCK2O43639 380 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 MGEA5O60502 916 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 RPS6KA5O75582 802 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 C22orf31O95567 290 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 IBSPP21815 317 aaPredicted RBP19.12■□□□□ 0.65
SMN2-216ENST00000638794 SSTR3P32745 418 aaPredicted RBP19.12■□□□□ 0.65
SMN2-216ENST00000638794 GATMP50440 423 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 AKAP17AQ02040 695 aaKnown RBP19.12■□□□□ 0.65
SMN2-216ENST00000638794 CAMK1Q14012 370 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 CTC1Q2NKJ3 1217 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 TMEM31Q5JXX7 168 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 CKAP2LQ8IYA6 745 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 SMAP1Q8IYB5 467 aaPredicted RBP19.12■□□□□ 0.65
SMN2-216ENST00000638794 BBXQ8WY36 941 aaPredicted RBP19.12■□□□□ 0.65
SMN2-216ENST00000638794 P2RX5Q93086 422 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 LENG9Q96B70 501 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 SLC26A6Q9BXS9 759 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 RNF26Q9BY78 433 aaPredicted RBP19.12■□□□□ 0.65
SMN2-216ENST00000638794 ERVK-5Q9HDB9 667 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 LRFN2Q9ULH4 789 aa19.12■□□□□ 0.65
SMN2-216ENST00000638794 MAFBQ9Y5Q3 323 aaPredicted RBP19.12■□□□□ 0.65
SMN2-216ENST00000638794 PLXNA4Q9HCM2 1894 aa19.11■□□□□ 0.65
SMN2-216ENST00000638794 PI4K2BG5E9Z4 385 aa19.11■□□□□ 0.65
SMN2-216ENST00000638794 CIITAP33076 1130 aa19.11■□□□□ 0.65
SMN2-216ENST00000638794 TRMT1LQ7Z2T5 733 aaKnown RBP19.11■□□□□ 0.65
SMN2-216ENST00000638794 CCDC148Q8NFR7 591 aa19.11■□□□□ 0.65
SMN2-216ENST00000638794 BICD2Q8TD16 824 aa19.11■□□□□ 0.65
SMN2-216ENST00000638794 PPP1R16BQ96T49 567 aa19.11■□□□□ 0.65
SMN2-216ENST00000638794 VPS54Q9P1Q0 977 aa19.11■□□□□ 0.65
SMN2-216ENST00000638794 TCEAL9Q9UHQ7 104 aa19.11■□□□□ 0.65
SMN2-216ENST00000638794 PCDHA10Q9Y5I2 948 aa19.11■□□□□ 0.65
SMN2-216ENST00000638794 FAM86C2PA6NEL3 165 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 ITGB1P05556 798 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 PSAPP07602 524 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 IFNAR1P17181 557 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 DNAJB1P25685 340 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 PSMA5P28066 241 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 PDIA3P30101 505 aaKnown RBP19.1■□□□□ 0.65
SMN2-216ENST00000638794 GTF2F1P35269 517 aaKnown RBP eCLIP19.1■□□□□ 0.65
SMN2-216ENST00000638794 SARSP49591 514 aaKnown RBP19.1■□□□□ 0.65
SMN2-216ENST00000638794 CCT2P78371 535 aaKnown RBP19.1■□□□□ 0.65
SMN2-216ENST00000638794 DLX2Q07687 328 aaPredicted RBP19.1■□□□□ 0.65
SMN2-216ENST00000638794 KIZQ2M2Z5 673 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 METTL13Q8N6R0 699 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 KLHL23Q8NBE8 558 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 CCDC136Q96JN2 1154 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 OSMRQ99650 979 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 ADAM2Q99965 735 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 NCOA5Q9HCD5 579 aaKnown RBP19.1■□□□□ 0.65
SMN2-216ENST00000638794 GABBR1Q9UBS5 961 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 ST3GAL5Q9UNP4 418 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 FAM50BQ9Y247 325 aa19.1■□□□□ 0.65
SMN2-216ENST00000638794 DENND3A2RUS2 1198 aa19.09■□□□□ 0.65
SMN2-216ENST00000638794 EDIL3O43854 480 aa19.09■□□□□ 0.65
SMN2-216ENST00000638794 GPR37L1O60883 481 aa19.09■□□□□ 0.65
SMN2-216ENST00000638794 REC8O95072 547 aa19.09■□□□□ 0.65
SMN2-216ENST00000638794 VTNP04004 478 aa19.09■□□□□ 0.65
SMN2-216ENST00000638794 EVCP57679 992 aa19.09■□□□□ 0.65
SMN2-216ENST00000638794 CLUL1Q15846 466 aa19.09■□□□□ 0.65
SMN2-216ENST00000638794 NAALADL2Q58DX5 795 aa19.09■□□□□ 0.65
SMN2-216ENST00000638794 SPPL3Q8TCT6 385 aa19.09■□□□□ 0.65
SMN2-216ENST00000638794 IGFLR1Q9H665 355 aa19.09■□□□□ 0.65
SMN2-216ENST00000638794 RGS18Q9NS28 235 aa19.09■□□□□ 0.65
SMN2-216ENST00000638794 SAMM50Q9Y512 469 aa19.09■□□□□ 0.65
SMN2-216ENST00000638794 PCDHB7Q9Y5E2 793 aa19.09■□□□□ 0.65
SMN2-216ENST00000638794 GPR182O15218 404 aa19.08■□□□□ 0.64
SMN2-216ENST00000638794 LINC01565O15544 149 aa19.08■□□□□ 0.64
SMN2-216ENST00000638794 TBX10O75333 385 aa19.08■□□□□ 0.64
SMN2-216ENST00000638794 GPR32O75388 356 aa19.08■□□□□ 0.64
SMN2-216ENST00000638794 CLCN3P51790 818 aa19.08■□□□□ 0.64
SMN2-216ENST00000638794 CRYBB1P53674 252 aaPredicted RBP19.08■□□□□ 0.64
SMN2-216ENST00000638794 ZP2Q05996 745 aa19.08■□□□□ 0.64
SMN2-216ENST00000638794 FAM43BQ6ZT52 329 aaPredicted RBP19.08■□□□□ 0.64
SMN2-216ENST00000638794 FAM228AQ86W67 206 aa19.08■□□□□ 0.64
SMN2-216ENST00000638794 C1orf112Q9NSG2 853 aa19.08■□□□□ 0.64
SMN2-216ENST00000638794 CEP131Q9UPN4 1083 aa19.08■□□□□ 0.64
SMN2-216ENST00000638794 WDR64B1ANS9 1081 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms