RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 MRPL42Q9Y6G3 142 aaKnown RBP20.96■□□□□ 0.95
CLN6-220ENST00000637450 PSMA5P28066 241 aa20.95■□□□□ 0.94
CLN6-220ENST00000637450 SMAP1Q8IYB5 467 aaPredicted RBP20.95■□□□□ 0.94
CLN6-220ENST00000637450 BICD2Q8TD16 824 aa20.95■□□□□ 0.94
CLN6-220ENST00000637450 BBXQ8WY36 941 aaPredicted RBP20.95■□□□□ 0.94
CLN6-220ENST00000637450 P2RX5Q93086 422 aa20.95■□□□□ 0.94
CLN6-220ENST00000637450 LRFN3Q9BTN0 628 aa20.95■□□□□ 0.94
CLN6-220ENST00000637450 RNF26Q9BY78 433 aaPredicted RBP20.95■□□□□ 0.94
CLN6-220ENST00000637450 NOC2LQ9Y3T9 749 aaKnown RBP20.95■□□□□ 0.94
CLN6-220ENST00000637450 PCDHA10Q9Y5I2 948 aa20.95■□□□□ 0.94
CLN6-220ENST00000637450 PI4K2BG5E9Z4 385 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 IFNAR1P17181 557 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 PDIA3P30101 505 aaKnown RBP20.94■□□□□ 0.94
CLN6-220ENST00000637450 LTBRP36941 435 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 EVCP57679 992 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 NFX1Q12986 1120 aaKnown RBP20.94■□□□□ 0.94
CLN6-220ENST00000637450 CAMK1Q14012 370 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 CTC1Q2NKJ3 1217 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 PRR16Q569H4 304 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 NAALADL2Q58DX5 795 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 EP400NLQ6ZTU2 488 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 CKAP2LQ8IYA6 745 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 RASGRP4Q8TDF6 673 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 TMEM40Q8WWA1 233 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 ERVK-5Q9HDB9 667 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 ALG13Q9NP73 1137 aaKnown RBP20.94■□□□□ 0.94
CLN6-220ENST00000637450 CLDND1Q9NY35 253 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 GINS2Q9Y248 185 aa20.94■□□□□ 0.94
CLN6-220ENST00000637450 MGEA5O60502 916 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 PPFIA3O75145 1194 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 RPS6KA5O75582 802 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 REC8O95072 547 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 C22orf31O95567 290 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 MMP1P03956 469 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 PSAPP07602 524 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 SARSP49591 514 aaKnown RBP20.93■□□□□ 0.94
CLN6-220ENST00000637450 HYAL1Q12794 435 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 TMEM31Q5JXX7 168 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 CCDC148Q8NFR7 591 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 LENG9Q96B70 501 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 SLC26A6Q9BXS9 759 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 LRFN2Q9ULH4 789 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 ST3GAL5Q9UNP4 418 aa20.93■□□□□ 0.94
CLN6-220ENST00000637450 RALGAPA2Q2PPJ7 1873 aa20.92■□□□□ 0.94
CLN6-220ENST00000637450 EDIL3O43854 480 aa20.92■□□□□ 0.94
CLN6-220ENST00000637450 GPR37L1O60883 481 aa20.92■□□□□ 0.94
CLN6-220ENST00000637450 ITGB1P05556 798 aa20.92■□□□□ 0.94
CLN6-220ENST00000637450 PAN2Q504Q3 1202 aaKnown RBP20.92■□□□□ 0.94
CLN6-220ENST00000637450 ODR4Q5SWX8 454 aa20.92■□□□□ 0.94
CLN6-220ENST00000637450 SPPL3Q8TCT6 385 aa20.92■□□□□ 0.94
CLN6-220ENST00000637450 CCDC136Q96JN2 1154 aa20.92■□□□□ 0.94
CLN6-220ENST00000637450 C11orf16Q9NQ32 467 aa20.92■□□□□ 0.94
CLN6-220ENST00000637450 RGS18Q9NS28 235 aa20.92■□□□□ 0.94
CLN6-220ENST00000637450 VPS54Q9P1Q0 977 aa20.92■□□□□ 0.94
CLN6-220ENST00000637450 GABBR1Q9UBS5 961 aa20.92■□□□□ 0.94
CLN6-220ENST00000637450 PCDHB7Q9Y5E2 793 aa20.92■□□□□ 0.94
CLN6-220ENST00000637450 GPR182O15218 404 aa20.91■□□□□ 0.94
CLN6-220ENST00000637450 GPR32O75388 356 aa20.91■□□□□ 0.94
CLN6-220ENST00000637450 DNAJB1P25685 340 aa20.91■□□□□ 0.94
CLN6-220ENST00000637450 SSTR3P32745 418 aaPredicted RBP20.91■□□□□ 0.94
CLN6-220ENST00000637450 GATMP50440 423 aa20.91■□□□□ 0.94
CLN6-220ENST00000637450 CRYBB1P53674 252 aaPredicted RBP20.91■□□□□ 0.94
CLN6-220ENST00000637450 CCT2P78371 535 aaKnown RBP20.91■□□□□ 0.94
CLN6-220ENST00000637450 KIZQ2M2Z5 673 aa20.91■□□□□ 0.94
CLN6-220ENST00000637450 TRMT1LQ7Z2T5 733 aaKnown RBP20.91■□□□□ 0.94
CLN6-220ENST00000637450 NLRC5Q86WI3 1866 aa20.91■□□□□ 0.94
CLN6-220ENST00000637450 KLHL23Q8NBE8 558 aa20.91■□□□□ 0.94
CLN6-220ENST00000637450 ADAM2Q99965 735 aa20.91■□□□□ 0.94
CLN6-220ENST00000637450 NCOA5Q9HCD5 579 aaKnown RBP20.91■□□□□ 0.94
CLN6-220ENST00000637450 SH3GLB2Q9NR46 395 aa20.91■□□□□ 0.94
CLN6-220ENST00000637450 TCEAL9Q9UHQ7 104 aa20.91■□□□□ 0.94
CLN6-220ENST00000637450 FAM50BQ9Y247 325 aa20.91■□□□□ 0.94
CLN6-220ENST00000637450 DENND3A2RUS2 1198 aa20.9■□□□□ 0.94
CLN6-220ENST00000637450 USP11P51784 963 aa20.9■□□□□ 0.94
CLN6-220ENST00000637450 SLC24A5Q71RS6 500 aa20.9■□□□□ 0.94
CLN6-220ENST00000637450 RUFY3Q7L099 469 aa20.9■□□□□ 0.94
CLN6-220ENST00000637450 METTL13Q8N6R0 699 aa20.9■□□□□ 0.94
CLN6-220ENST00000637450 ZSWIM6Q9HCJ5 1215 aa20.9■□□□□ 0.94
CLN6-220ENST00000637450 C1orf112Q9NSG2 853 aa20.9■□□□□ 0.94
CLN6-220ENST00000637450 RNF216Q9NWF9 866 aaPredicted RBP20.9■□□□□ 0.94
CLN6-220ENST00000637450 CEP131Q9UPN4 1083 aa20.9■□□□□ 0.94
CLN6-220ENST00000637450 SAMM50Q9Y512 469 aa20.9■□□□□ 0.94
CLN6-220ENST00000637450 WDR64B1ANS9 1081 aa20.89■□□□□ 0.93
CLN6-220ENST00000637450 C9IYK1 514 aa20.89■□□□□ 0.93
CLN6-220ENST00000637450 MSH4O15457 936 aa20.89■□□□□ 0.93
CLN6-220ENST00000637450 MAGEB2O15479 319 aa20.89■□□□□ 0.93
CLN6-220ENST00000637450 EPB41L2O43491 1005 aaKnown RBP20.89■□□□□ 0.93
CLN6-220ENST00000637450 VTNP04004 478 aa20.89■□□□□ 0.93
CLN6-220ENST00000637450 GTF2F1P35269 517 aaKnown RBP eCLIP20.89■□□□□ 0.931e-6■■■■□ 26
CLN6-220ENST00000637450 FAM189BP81408 668 aa20.89■□□□□ 0.93
CLN6-220ENST00000637450 DLX2Q07687 328 aaPredicted RBP20.89■□□□□ 0.93
CLN6-220ENST00000637450 ADAM15Q13444 863 aa20.89■□□□□ 0.93
CLN6-220ENST00000637450 TOB2Q14106 344 aaPredicted RBP20.89■□□□□ 0.93
CLN6-220ENST00000637450 FAM167AQ96KS9 214 aa20.89■□□□□ 0.93
CLN6-220ENST00000637450 PPP1R16BQ96T49 567 aa20.89■□□□□ 0.93
CLN6-220ENST00000637450 OSMRQ99650 979 aa20.89■□□□□ 0.93
CLN6-220ENST00000637450 IGFLR1Q9H665 355 aa20.89■□□□□ 0.93
CLN6-220ENST00000637450 DISC1Q9NRI5 854 aa20.89■□□□□ 0.93
CLN6-220ENST00000637450 PRKAG3Q9UGI9 489 aa20.89■□□□□ 0.93
CLN6-220ENST00000637450 CSPG5O95196 566 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms