RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 XDHP47989 1333 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 A0A0G2JNJ9 132 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 B3GALT2O43825 422 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 ERCC3P19447 782 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 PTGS1P23219 599 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 MC4RP32245 332 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 GRIA2P42262 883 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 CLK3P49761 638 aaKnown RBP2.46□□□□□ -2.02
SCN1A-215ENST00000637285 ATP2C1P98194 919 aaPredicted RBP2.46□□□□□ -2.02
SCN1A-215ENST00000637285 CD83Q01151 205 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 SAFB2Q14151 953 aaKnown RBP eCLIP2.46□□□□□ -2.02
SCN1A-215ENST00000637285 ACAP1Q15027 740 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 ELAVL1Q15717 326 aaKnown RBP2.46□□□□□ -2.02
SCN1A-215ENST00000637285 RABL3Q5HYI8 236 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 C6orf15Q6UXA7 325 aaPredicted RBP2.46□□□□□ -2.02
SCN1A-215ENST00000637285 CXXC5Q7LFL8 322 aaKnown RBP2.46□□□□□ -2.02
SCN1A-215ENST00000637285 BEND2Q8NDZ0 799 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 KCTD13Q8WZ19 329 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 ANAPC16Q96DE5 110 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 SPATA32Q96LK8 384 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 R3HDMLQ9H3Y0 253 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 CYP4F11Q9HBI6 524 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 INCENPQ9NQS7 918 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 GALNT8Q9NY28 637 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 Q9UFV3 132 aa2.46□□□□□ -2.02
SCN1A-215ENST00000637285 DDX41Q9UJV9 622 aaKnown RBP2.46□□□□□ -2.02
SCN1A-215ENST00000637285 PMS2P1A4D2B8 440 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 FAM90A27PA6NNH2 459 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 B2RBV5 119 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 SUSD5O60279 629 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 ITGB1P05556 798 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 PTPN1P18031 435 aaKnown RBP2.45□□□□□ -2.02
SCN1A-215ENST00000637285 CTGFP29279 349 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 KIZQ2M2Z5 673 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 HABP4Q5JVS0 413 aaKnown RBP2.45□□□□□ -2.02
SCN1A-215ENST00000637285 FBXO42Q6P3S6 717 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 KCNT2Q6UVM3 1135 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 LBX2Q6XYB7 198 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 MICALCLQ6ZW33 695 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 RHOUQ7L0Q8 258 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 HDGFL2Q7Z4V5 671 aaPredicted RBP2.45□□□□□ -2.02
SCN1A-215ENST00000637285 ZNF654Q8IZM8 581 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 SH3RF2Q8TEC5 729 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 GPRASP2Q96D09 838 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 IER2Q9BTL4 223 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 TOR3AQ9H497 397 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 TESQ9UGI8 421 aaKnown RBP2.45□□□□□ -2.02
SCN1A-215ENST00000637285 COX11Q9Y6N1 276 aa2.45□□□□□ -2.02
SCN1A-215ENST00000637285 GOLGA8BA8MQT2 603 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 FAM47E-STBD1D6RA91 191 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 IKBKBO14920 756 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 SOD2P04179 222 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 NR4A1P22736 598 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 ECE1P42892 770 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 SMAD3P84022 425 aaKnown RBP2.44□□□□□ -2.02
SCN1A-215ENST00000637285 MAP4K2Q12851 820 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 ADAM15Q13444 863 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 MOGSQ13724 837 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 STILQ15468 1287 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 TIGD2Q4W5G0 525 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 NBPF6Q5VWK0 638 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 LARP1BQ659C4 914 aaKnown RBP2.44□□□□□ -2.02
SCN1A-215ENST00000637285 FAM111BQ6SJ93 734 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 LRSAM1Q6UWE0 723 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 EP400NLQ6ZTU2 488 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 ZC3H7AQ8IWR0 971 aaKnown RBP2.44□□□□□ -2.02
SCN1A-215ENST00000637285 FAM178BQ8IXR5 827 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 ELOA2Q8IYF1 753 aaPredicted RBP2.44□□□□□ -2.02
SCN1A-215ENST00000637285 MB21D1Q8N884 522 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 THAP3Q8WTV1 239 aaPredicted RBP2.44□□□□□ -2.02
SCN1A-215ENST00000637285 ATXN2LQ8WWM7 1075 aaKnown RBP2.44□□□□□ -2.02
SCN1A-215ENST00000637285 RABGGTAQ92696 567 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 WNK4Q96J92 1243 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 RPL10LQ96L21 214 aaKnown RBP2.44□□□□□ -2.02
SCN1A-215ENST00000637285 NBPF4Q96M43 638 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 MNTQ99583 582 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 BTBD2Q9BX70 525 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 BACH2Q9BYV9 841 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 IPPKQ9H8X2 491 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 UCKL1Q9NWZ5 548 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 RNF7Q9UBF6 113 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 TRPS1Q9UHF7 1281 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 FZD1Q9UP38 647 aa2.44□□□□□ -2.02
SCN1A-215ENST00000637285 TCRBV5S4A2TA0A5A2 114 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 UBE2QL1A1L167 161 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 KLRG2A4D1S0 409 aaPredicted RBP2.43□□□□□ -2.02
SCN1A-215ENST00000637285 MYADML2A6NDP7 307 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 PRAMEF25A6NGN4 478 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 GOLGA6L6A8MZA4 724 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 DLX3O60479 287 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 DDAH1O94760 285 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 PTH2RP49190 550 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 RABGGTBP53611 331 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 PPP2R2AP63151 447 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 LCE1AQ5T7P2 110 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 TMEM200BQ69YZ2 307 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 GRAMD4Q6IC98 578 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 RSPO2Q6UXX9 243 aaPredicted RBP2.43□□□□□ -2.02
SCN1A-215ENST00000637285 ARHGAP36Q6ZRI8 547 aa2.43□□□□□ -2.02
SCN1A-215ENST00000637285 LRRC55Q6ZSA7 311 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms