RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 RINT1Q6NUQ1 792 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 SV2BQ7L1I2 683 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 SYT2Q8N9I0 419 aaPredicted RBP11.88□□□□□ -0.51
CLN5-213ENST00000636681 NEK9Q8TD19 979 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 ATP6V0A1Q93050 837 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 DNAJC19Q96DA6 116 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 TIGD1Q96MW7 591 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 DEFB118Q96PH6 123 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 NACC1Q96RE7 527 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 TUT1Q9H6E5 874 aaKnown RBP11.88□□□□□ -0.51
CLN5-213ENST00000636681 AZI2Q9H6S1 392 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 GPRC5CQ9NQ84 441 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 KLRC4O43908 158 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 LYPLA2O95372 231 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 PTMSP20962 102 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 PURAQ00577 322 aaKnown RBP11.87□□□□□ -0.51
CLN5-213ENST00000636681 DRP2Q13474 957 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 LRRC41Q15345 812 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 KCNA10Q16322 511 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 SKOR2Q2VWA4 1001 aaPredicted RBP11.87□□□□□ -0.51
CLN5-213ENST00000636681 FAM160B1Q5W0V3 765 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 CCSAPQ6IQ19 270 aaPredicted RBP11.87□□□□□ -0.51
CLN5-213ENST00000636681 FBXO46Q6PJ61 603 aaPredicted RBP11.87□□□□□ -0.51
CLN5-213ENST00000636681 PADI6Q6TGC4 694 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 GLIS3Q8NEA6 775 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 KLHDC9Q8NEP7 349 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 DDX12PQ92771 950 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 FGFBP2Q9BYJ0 223 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 TRIM9Q9C026 710 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 RNF208Q9H0X6 261 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 SMARCAD1Q9H4L7 1026 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 Q9Y3F1 56 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 ASGR1P07306 291 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 INSRRP14616 1297 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 BMP6P22004 513 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 ZNF200P98182 395 aaPredicted RBP11.87□□□□□ -0.51
CLN5-213ENST00000636681 KIAA0753Q2KHM9 967 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 C1orf186Q6ZWK4 172 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 PLPPR4Q7Z2D5 763 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 SMYD4Q8IYR2 804 aaPredicted RBP11.87□□□□□ -0.51
CLN5-213ENST00000636681 DAW1Q8N136 415 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 CEP170P1Q96L14 293 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 REEP2Q9BRK0 252 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 PAK6Q9NQU5 681 aaPredicted RBP11.87□□□□□ -0.51
CLN5-213ENST00000636681 XPNPEP1Q9NQW7 623 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 CYP26B1Q9NR63 512 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 TBC1D7Q9P0N9 293 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 TRPC6Q9Y210 931 aa11.87□□□□□ -0.51
CLN5-213ENST00000636681 GRIN2DO15399 1336 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 ARHGEF35A5YM69 484 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
CLN5-213ENST00000636681 F2P00734 622 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 GJB1P08034 283 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 PSEN2P49810 448 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 CPT1AP50416 773 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 ASIC1P78348 528 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 MAPK7Q13164 816 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 GIT2Q14161 759 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 MFSD10Q14728 455 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 TARBP2Q15633 366 aaKnown RBP11.86□□□□□ -0.51
CLN5-213ENST00000636681 XKR3Q5GH77 459 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 RBM43Q6ZSC3 357 aaKnown RBP11.86□□□□□ -0.51
CLN5-213ENST00000636681 LRRC71Q8N4P6 559 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 ATP8B4Q8TF62 1192 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 ZNF333Q96JL9 665 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 ZNF668Q96K58 619 aaPredicted RBP11.86□□□□□ -0.51
CLN5-213ENST00000636681 C7orf25Q9BPX7 421 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 SETD4Q9NVD3 440 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 ERAP1Q9NZ08 941 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 KIAA1468Q9P260 1216 aa11.86□□□□□ -0.51
CLN5-213ENST00000636681 DBR1Q9UK59 544 aaKnown RBP11.86□□□□□ -0.51
CLN5-213ENST00000636681 IDEP14735 1019 aa11.85□□□□□ -0.51
CLN5-213ENST00000636681 MUTP22033 750 aa11.85□□□□□ -0.51
CLN5-213ENST00000636681 MKRN4PQ13434 485 aaPredicted RBP11.85□□□□□ -0.51
CLN5-213ENST00000636681 KMT5BQ4FZB7 885 aa11.85□□□□□ -0.51
CLN5-213ENST00000636681 MARCH8Q5T0T0 291 aa11.85□□□□□ -0.51
CLN5-213ENST00000636681 BSNDQ8WZ55 320 aa11.85□□□□□ -0.51
CLN5-213ENST00000636681 TMEM143Q96AN5 459 aa11.85□□□□□ -0.51
CLN5-213ENST00000636681 NIFKQ9BYG3 293 aaKnown RBP11.85□□□□□ -0.51
CLN5-213ENST00000636681 CUEDC2Q9H467 287 aa11.85□□□□□ -0.51
CLN5-213ENST00000636681 ZHX3Q9H4I2 956 aa11.85□□□□□ -0.51
CLN5-213ENST00000636681 ANKEF1Q9NU02 776 aa11.85□□□□□ -0.51
CLN5-213ENST00000636681 PCDH10Q9P2E7 1040 aa11.85□□□□□ -0.51
CLN5-213ENST00000636681 USP25Q9UHP3 1055 aa11.85□□□□□ -0.51
CLN5-213ENST00000636681 MAN1B1Q9UKM7 699 aa11.85□□□□□ -0.51
CLN5-213ENST00000636681 STK24Q9Y6E0 443 aa11.85□□□□□ -0.51
CLN5-213ENST00000636681 HAS3O00219 553 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 SLC26A4O43511 780 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 RPN1P04843 607 aaKnown RBP11.84□□□□□ -0.51
CLN5-213ENST00000636681 SMIM10L2AP0DMW4 78 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 SMIM10L2BP0DMW5 78 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 SARSP49591 514 aaKnown RBP11.84□□□□□ -0.51
CLN5-213ENST00000636681 NBPF20Q3BBV1 942 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
CLN5-213ENST00000636681 PPP1R16BQ96T49 567 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 MCOLN1Q9GZU1 580 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 IKZF4Q9H2S9 585 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 PDLIM7Q9NR12 457 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 HDAC6Q9UBN7 1215 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 TUBE1Q9UJT0 475 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms