RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 TBX10O75333 385 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 RPLP2P05387 115 aaKnown RBP17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 ITGB1P05556 798 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 IFNAR1P17181 557 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 DNAJB1P25685 340 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 ADAM15Q13444 863 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 CAMK1Q14012 370 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 TMEM266Q2M3C6 531 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 WWC2Q6AWC2 1192 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 PPP1R18Q6NYC8 613 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 RBM23Q86U06 439 aaKnown RBP17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 NPAS4Q8IUM7 802 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 KLHL23Q8NBE8 558 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 PHKBQ93100 1093 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 SLC26A6Q9BXS9 759 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 RNF26Q9BY78 433 aaPredicted RBP17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 CD207Q9UJ71 328 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 SQORQ9Y6N5 450 aa17.67■□□□□ 0.42
SNRNP48-203ENST00000634363 DDX39AO00148 427 aaKnown RBP17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 STXBP3O00186 592 aa17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 CDKL5O76039 1030 aa17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 SCG2P13521 617 aa17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 ZNF76P36508 570 aa17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 GATMP50440 423 aa17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 KRT76Q01546 638 aa17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 PFKFB3Q16875 520 aaPredicted RBP17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 SPOUT1Q5T280 376 aaKnown RBP17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 PLPPR4Q7Z2D5 763 aa17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 CMTR2Q8IYT2 770 aaKnown RBP17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 SPPL3Q8TCT6 385 aa17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 POF1BQ8WVV4 589 aa17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 P2RX5Q93086 422 aa17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 PPP2R3CQ969Q6 453 aa17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 POP1Q99575 1024 aaKnown RBP17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 BACH2Q9BYV9 841 aa17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 MUTYHQ9UIF7 546 aa17.66■□□□□ 0.42
SNRNP48-203ENST00000634363 BACH1O14867 736 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 PRPF3O43395 683 aaKnown RBP17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 PFKFB2O60825 505 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 KLRC1P26715 233 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 SSRP1Q08945 709 aaKnown RBP17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 SCRN1Q12765 414 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 SMAD4Q13485 552 aaKnown RBP17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 RABEP1Q15276 862 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 NTRK3Q16288 839 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 MTHFD1LQ6UB35 978 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 ADGRD2Q7Z7M1 963 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 RNF135Q8IUD6 432 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 MICAL1Q8TDZ2 1067 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 CCDC12Q8WUD4 166 aaPredicted RBP17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 KIF2CQ99661 725 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 RIC8AQ9NPQ8 531 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 BARHL2Q9NY43 387 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 PCDHB7Q9Y5E2 793 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 EVPLQ92817 2033 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 NFASCO94856 1347 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 IGSF9BQ9UPX0 1349 aa17.65■□□□□ 0.42
SNRNP48-203ENST00000634363 SMIM35A0A1B0GVV1 85 aa17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 SMCO2A6NFE2 343 aa17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 NRIP1P48552 1158 aa17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 ADCY7P51828 1080 aa17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 ITGB3BPQ13352 177 aaPredicted RBP17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 CEP55Q53EZ4 464 aa17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 NAALADL2Q58DX5 795 aa17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 HFE2Q6ZVN8 426 aa17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 TRMT1LQ7Z2T5 733 aaKnown RBP17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 CRIPAKQ8N1N5 446 aa17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 NME8Q8N427 588 aa17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 TBC1D32Q96NH3 1257 aa17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 CDHR5Q9HBB8 845 aa17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 AGO4Q9HCK5 861 aaKnown RBP17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 TMEM260Q9NX78 707 aa17.64■□□□□ 0.41
SNRNP48-203ENST00000634363 PLXNA4Q9HCM2 1894 aa17.63■□□□□ 0.41
SNRNP48-203ENST00000634363 ST18O60284 1047 aa17.63■□□□□ 0.41
SNRNP48-203ENST00000634363 FOSP01100 380 aaPredicted RBP17.63■□□□□ 0.41
SNRNP48-203ENST00000634363 ME3Q16798 604 aa17.63■□□□□ 0.41
SNRNP48-203ENST00000634363 TYW1BQ6NUM6 668 aa17.63■□□□□ 0.41
SNRNP48-203ENST00000634363 TEX2Q8IWB9 1127 aa17.63■□□□□ 0.41
SNRNP48-203ENST00000634363 FBXL18Q96ME1 805 aa17.63■□□□□ 0.41
SNRNP48-203ENST00000634363 PPP1R16BQ96T49 567 aa17.63■□□□□ 0.41
SNRNP48-203ENST00000634363 ANO3Q9BYT9 981 aa17.63■□□□□ 0.41
SNRNP48-203ENST00000634363 GLT8D2Q9H1C3 349 aa17.63■□□□□ 0.41
SNRNP48-203ENST00000634363 TMX1Q9H3N1 280 aa17.63■□□□□ 0.41
SNRNP48-203ENST00000634363 PCDHGC5Q9Y5F6 944 aa17.63■□□□□ 0.41
SNRNP48-203ENST00000634363 MUC6Q6W4X9 2439 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 DENND3A2RUS2 1198 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 HBP1O60381 514 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 RPS6KA5O75582 802 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 ATG7O95352 703 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 DEXIO95424 95 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 FAM160B1Q5W0V3 765 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 EFHBQ8N7U6 833 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 CCDC148Q8NFR7 591 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 GTF3C6Q969F1 213 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 MSLNLQ96KJ4 702 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 ADAM2Q99965 735 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 TLE6Q9H808 572 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 LIMCH1Q9UPQ0 1083 aa17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 NOC2LQ9Y3T9 749 aaKnown RBP17.62■□□□□ 0.41
SNRNP48-203ENST00000634363 PCDHB12Q9Y5F1 795 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms