RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 UNC5CLQ8IV45 518 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 BSDC1Q9NW68 430 aaPredicted RBP12.61□□□□□ -0.39
SHPRH-211ENST00000629427 KLHL8Q9P2G9 620 aaPredicted RBP12.61□□□□□ -0.39
SHPRH-211ENST00000629427 CDC23Q9UJX2 597 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 HEG1Q9ULI3 1381 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 NLRP1Q9C000 1473 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 SOWAHDA6NJG2 315 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 PRPF3O43395 683 aaKnown RBP12.61□□□□□ -0.39
SHPRH-211ENST00000629427 HOXD10P28358 340 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 CDC25BP30305 580 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 SLC8A1P32418 973 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 EIF4A3P38919 411 aaKnown RBP12.61□□□□□ -0.39
SHPRH-211ENST00000629427 SPTLC3Q9NUV7 552 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 A0A087WWV3 80 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 A0A1W2PQ27 194 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 A0A1W2PQ64 194 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 A0A1W2PQD8 194 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 SYNDIG1LA6NDD5 238 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 SNX2O60749 519 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 KIAA1755Q5JYT7 1200 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 SRRM1Q8IYB3 904 aaKnown RBP12.61□□□□□ -0.39
SHPRH-211ENST00000629427 DNAJC17Q9NVM6 304 aaKnown RBP12.61□□□□□ -0.39
SHPRH-211ENST00000629427 TRPA1O75762 1119 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 JAK3P52333 1124 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 CAPRIN1Q14444 709 aaKnown RBP12.61□□□□□ -0.39
SHPRH-211ENST00000629427 ZNF699Q32M78 642 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 BBS9Q3SYG4 887 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 RHPN2Q8IUC4 686 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 MRFAP1L1Q96HT8 127 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 ANLNQ9NQW6 1124 aa12.61□□□□□ -0.39
SHPRH-211ENST00000629427 SRPRBQ9Y5M8 271 aaKnown RBP12.61□□□□□ -0.39
SHPRH-211ENST00000629427 IMPG1Q17R60 797 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 SUSD4Q5VX71 490 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 CENPUQ71F23 418 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 FMO2Q99518 471 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 BHMT2Q9H2M3 363 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 THAP9Q9H5L6 903 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 PCDHB6Q9Y5E3 794 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 HEY1Q9Y5J3 304 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 CREB3O43889 395 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 HUS1O60921 280 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 MMP19Q99542 508 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 SARS2Q9NP81 518 aaKnown RBP12.6□□□□□ -0.39
SHPRH-211ENST00000629427 GINM1Q9NU53 330 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 INTUQ9ULD6 942 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 RPSAP08865 295 aaKnown RBP12.6□□□□□ -0.39
SHPRH-211ENST00000629427 TAC1P20366 129 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 EPHB4P54760 987 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 RASEFQ8IZ41 740 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 DCAF4Q8WV16 495 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 OSBP2Q969R2 916 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 TDRD3Q9H7E2 651 aaKnown RBP12.6□□□□□ -0.39
SHPRH-211ENST00000629427 HSPA6P17066 643 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 PHKA2P46019 1235 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 TAF1BQ53T94 588 aaPredicted RBP12.6□□□□□ -0.39
SHPRH-211ENST00000629427 IQANK1A0A1B0GTG1 560 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 TNFAIP2Q03169 654 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 PIP4K2CQ8TBX8 421 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 ATP6V0A4Q9HBG4 840 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 TOPORSQ9NS56 1045 aaPredicted RBP12.6□□□□□ -0.39
SHPRH-211ENST00000629427 SAMSN1Q9NSI8 373 aaKnown RBP12.6□□□□□ -0.39
SHPRH-211ENST00000629427 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 FEM1BQ9UK73 627 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 GPC3P51654 580 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 MXD4Q14582 209 aaPredicted RBP12.6□□□□□ -0.39
SHPRH-211ENST00000629427 TBCCQ15814 346 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 FAM133BQ5BKY9 247 aaKnown RBP12.6□□□□□ -0.39
SHPRH-211ENST00000629427 SLC10A5Q5PT55 438 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 ACRBPQ8NEB7 543 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 PIGBQ92521 554 aa12.6□□□□□ -0.39
SHPRH-211ENST00000629427 TSR3Q9UJK0 312 aaKnown RBP12.6□□□□□ -0.39
SHPRH-211ENST00000629427 ABCB11O95342 1321 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 ESRRGP62508 458 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 BEST2Q8NFU1 509 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 LZICQ8WZA0 190 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 CDC42BPGQ6DT37 1551 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 DR1Q01658 176 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 DHX9Q08211 1270 aaKnown RBP12.59□□□□□ -0.39
SHPRH-211ENST00000629427 ACBD5Q5T8D3 534 aaPredicted RBP12.59□□□□□ -0.39
SHPRH-211ENST00000629427 LRRC31Q6UY01 552 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 ZNF467Q7Z7K2 595 aaPredicted RBP12.59□□□□□ -0.39
SHPRH-211ENST00000629427 LCA5Q86VQ0 697 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 ARHGEF25Q86VW2 580 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 PAGE5Q96GU1 130 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 KLC2Q9H0B6 622 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 SCHIP1Q9P0W5 487 aaPredicted RBP12.59□□□□□ -0.39
SHPRH-211ENST00000629427 PALLDQ8WX93 1383 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 NPHP4O75161 1426 aaPredicted RBP12.59□□□□□ -0.39
SHPRH-211ENST00000629427 LRRC63Q05C16 580 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 KCNA1Q09470 495 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 ANO4Q32M45 955 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 PPP4R3CPQ6ZMV5 832 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 THEGQ9P2T0 379 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 SUFUQ9UMX1 484 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 FARP1Q9Y4F1 1045 aaPredicted RBP12.59□□□□□ -0.39
SHPRH-211ENST00000629427 SLFN14P0C7P3 912 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 CHAMP1Q96JM3 812 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 STAP2Q9UGK3 403 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 ANAPC7Q9UJX3 599 aa12.59□□□□□ -0.39
SHPRH-211ENST00000629427 ECE2O60344 883 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms