RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ELAC2Q9BQ52 826 aaKnown RBP15.35■□□□□ 0.05
LDB3-209ENST00000623056 SAMD15Q9P1V8 674 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 NENFQ9UMX5 172 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 AGAP1Q9UPQ3 857 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 NIP7Q9Y221 180 aaKnown RBP eCLIP15.35■□□□□ 0.05
LDB3-209ENST00000623056 NR2E1Q9Y466 385 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 AFF2P51816 1311 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 FGGP02679 453 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 UCHL3P15374 230 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 SLC9A1P19634 815 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 ADAM9Q13443 819 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 SEPT2Q15019 361 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 CCHCR1Q8TD31 782 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 HES6Q96HZ4 224 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 RAB17Q9H0T7 212 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 VAT1LQ9HCJ6 419 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 BATF3Q9NR55 127 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 ZDHHC18Q9NUE0 388 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 TLDC2A0PJX2 215 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 EDIL3O43854 480 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 FLOT1O75955 427 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 H2AFZP0C0S5 128 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 PMS2P54278 862 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 ZNF268Q14587 947 aaPredicted RBP15.34■□□□□ 0.05
LDB3-209ENST00000623056 H2AFVQ71UI9 128 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 SYCE1Q8N0S2 351 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 SLC44A5Q8NCS7 719 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 RBM46Q8TBY0 533 aaKnown RBP15.34■□□□□ 0.05
LDB3-209ENST00000623056 AGAP11Q8TF27 550 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 L3MBTL3Q96JM7 780 aaPredicted RBP15.34■□□□□ 0.05
LDB3-209ENST00000623056 PRMT1Q99873 361 aaKnown RBP15.34■□□□□ 0.05
LDB3-209ENST00000623056 PABPC3Q9H361 631 aaKnown RBP15.34■□□□□ 0.05
LDB3-209ENST00000623056 KCTD10Q9H3F6 313 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 AZI2Q9H6S1 392 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 GOPCQ9HD26 462 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 KCNMB3Q9NPA1 279 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 ABCF3Q9NUQ8 709 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 SEC63Q9UGP8 760 aaKnown RBP15.34■□□□□ 0.05
LDB3-209ENST00000623056 MINPP1Q9UNW1 487 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 PCDHA2Q9Y5H9 948 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 LAMB2P55268 1798 aa15.34■□□□□ 0.05
LDB3-209ENST00000623056 SPDYE3A6NKU9 549 aa15.33■□□□□ 0.05
LDB3-209ENST00000623056 SMIM23A6NLE4 172 aa15.33■□□□□ 0.05
LDB3-209ENST00000623056 CAMTA2O94983 1202 aa15.33■□□□□ 0.05
LDB3-209ENST00000623056 NT5C2P49902 561 aa15.33■□□□□ 0.05
LDB3-209ENST00000623056 IFI35P80217 286 aaPredicted RBP15.33■□□□□ 0.05
LDB3-209ENST00000623056 DENND2CQ68D51 928 aa15.33■□□□□ 0.05
LDB3-209ENST00000623056 DUPD1Q68J44 220 aa15.33■□□□□ 0.05
LDB3-209ENST00000623056 C3orf67Q6ZVT6 689 aa15.33■□□□□ 0.05
LDB3-209ENST00000623056 ZNF444Q8N0Y2 327 aaPredicted RBP15.33■□□□□ 0.05
LDB3-209ENST00000623056 NEK9Q8TD19 979 aa15.33■□□□□ 0.05
LDB3-209ENST00000623056 SCFD1Q8WVM8 642 aa15.33■□□□□ 0.05
LDB3-209ENST00000623056 RNF25Q96BH1 459 aaPredicted RBP15.33■□□□□ 0.05
LDB3-209ENST00000623056 PIGSQ96S52 555 aa15.33■□□□□ 0.05
LDB3-209ENST00000623056 INTS9Q9NV88 658 aaKnown RBP15.33■□□□□ 0.05
LDB3-209ENST00000623056 BSDC1Q9NW68 430 aaPredicted RBP15.33■□□□□ 0.05
LDB3-209ENST00000623056 HDAC9Q9UKV0 1011 aa15.33■□□□□ 0.05
LDB3-209ENST00000623056 TTC7AQ9ULT0 858 aaPredicted RBP15.33■□□□□ 0.05
LDB3-209ENST00000623056 A0A0A6YYK5 440 aaPredicted RBP15.33■□□□□ 0.04
LDB3-209ENST00000623056 VIMP08670 466 aaKnown RBP15.33■□□□□ 0.04
LDB3-209ENST00000623056 PRKCIP41743 596 aa15.33■□□□□ 0.04
LDB3-209ENST00000623056 CCNHP51946 323 aaPredicted RBP15.33■□□□□ 0.04
LDB3-209ENST00000623056 PTENP60484 403 aa15.33■□□□□ 0.04
LDB3-209ENST00000623056 KCNJ2P63252 427 aa15.33■□□□□ 0.04
LDB3-209ENST00000623056 USP17L2Q6R6M4 530 aa15.33■□□□□ 0.04
LDB3-209ENST00000623056 BARGINQ6ZT62 677 aa15.33■□□□□ 0.04
LDB3-209ENST00000623056 BZW1Q7L1Q6 419 aaKnown RBP15.33■□□□□ 0.04
LDB3-209ENST00000623056 ZC3H3Q8IXZ2 948 aaKnown RBP15.33■□□□□ 0.04
LDB3-209ENST00000623056 TAF1P21675 1872 aa15.33■□□□□ 0.04
LDB3-209ENST00000623056 ROBO3Q96MS0 1386 aa15.33■□□□□ 0.04
LDB3-209ENST00000623056 CCDC169A6NNP5 214 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 RGS16O15492 202 aaPredicted RBP15.32■□□□□ 0.04
LDB3-209ENST00000623056 ALADP13716 330 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 NQO1P15559 274 aaKnown RBP15.32■□□□□ 0.04
LDB3-209ENST00000623056 IRX1P78414 480 aaPredicted RBP15.32■□□□□ 0.04
LDB3-209ENST00000623056 DR1Q01658 176 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 KLRC3Q07444 240 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 GRIK3Q13003 919 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 INTS5Q6P9B9 1019 aaKnown RBP15.32■□□□□ 0.04
LDB3-209ENST00000623056 ERP44Q9BS26 406 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 CCDC134Q9H6E4 229 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 NOP53Q9NZM5 478 aaKnown RBP15.32■□□□□ 0.04
LDB3-209ENST00000623056 TRPC6Q9Y210 931 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 JAG2Q9Y219 1238 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 ATP8B3O60423 1300 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 NPHP3-ACAD11A0A0J9YXS1 232 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 ESYT2A0FGR8 921 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 CETN3O15182 167 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 UBOX5O94941 541 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 PON1P27169 355 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 COPB2P35606 906 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 NPEPPSP55786 919 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 NCALDP61601 193 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
LDB3-209ENST00000623056 ZKSCAN8Q15776 578 aaPredicted RBP15.32■□□□□ 0.04
LDB3-209ENST00000623056 CCDC65Q8IXS2 484 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 BMP2KQ9NSY1 1161 aaPredicted RBP15.32■□□□□ 0.04
LDB3-209ENST00000623056 EMILIN3Q9NT22 766 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 TFCP2L1Q9NZI6 479 aa15.32■□□□□ 0.04
LDB3-209ENST00000623056 AMFRQ9UKV5 643 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms