RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ISM2Q6H9L7 571 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 CNNM4Q6P4Q7 775 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 PADI6Q6TGC4 694 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 FAM167AQ96KS9 214 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 CEP170P1Q96L14 293 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 NRBP2Q9NSY0 501 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 PTPN22Q9Y2R2 807 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 HSPA8P11142 646 aaKnown RBP19.81■□□□□ 0.76
PTCHD3-202ENST00000622555 IDEP14735 1019 aa19.81■□□□□ 0.76
PTCHD3-202ENST00000622555 CPT1AP50416 773 aa19.81■□□□□ 0.76
PTCHD3-202ENST00000622555 SLC26A2P50443 739 aa19.81■□□□□ 0.76
PTCHD3-202ENST00000622555 C1orf186Q6ZWK4 172 aa19.81■□□□□ 0.76
PTCHD3-202ENST00000622555 CCDC47Q96A33 483 aaKnown RBP19.81■□□□□ 0.76
PTCHD3-202ENST00000622555 FUCA2Q9BTY2 467 aa19.81■□□□□ 0.76
PTCHD3-202ENST00000622555 ERAP1Q9NZ08 941 aa19.81■□□□□ 0.76
PTCHD3-202ENST00000622555 KLRC4O43908 158 aa19.8■□□□□ 0.76
PTCHD3-202ENST00000622555 IRX5P78411 483 aaPredicted RBP19.8■□□□□ 0.76
PTCHD3-202ENST00000622555 CACNB1Q02641 598 aaPredicted RBP19.8■□□□□ 0.76
PTCHD3-202ENST00000622555 PLCB4Q15147 1175 aa19.8■□□□□ 0.76
PTCHD3-202ENST00000622555 STX1AQ16623 288 aa19.8■□□□□ 0.76
PTCHD3-202ENST00000622555 FSCN1Q16658 493 aaKnown RBP19.8■□□□□ 0.76
PTCHD3-202ENST00000622555 DNAJC19Q96DA6 116 aa19.8■□□□□ 0.76
PTCHD3-202ENST00000622555 CYP26B1Q9NR63 512 aa19.8■□□□□ 0.76
PTCHD3-202ENST00000622555 RMND1Q9NWS8 449 aa19.8■□□□□ 0.76
PTCHD3-202ENST00000622555 KCND2Q9NZV8 630 aa19.8■□□□□ 0.76
PTCHD3-202ENST00000622555 ZNF215Q9UL58 517 aaPredicted RBP19.8■□□□□ 0.76
PTCHD3-202ENST00000622555 USO1O60763 962 aaKnown RBP19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 C6orf222P0C671 652 aaPredicted RBP19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 BEX3Q00994 111 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 GIT2Q14161 759 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 MTERF2Q49AM1 385 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 KMT5BQ4FZB7 885 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 UNC13DQ70J99 1090 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 TRIML1Q8N9V2 468 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 ATP8B4Q8TF62 1192 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 BBXQ8WY36 941 aaPredicted RBP19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 REEP2Q9BRK0 252 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 C16orf70Q9BSU1 422 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 NIFKQ9BYG3 293 aaKnown RBP19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 TSPY26PQ9H489 355 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 GRPEL1Q9HAV7 217 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 SPC25Q9HBM1 224 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 EXOC1Q9NV70 894 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 TRPC6Q9Y210 931 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 SYNRGQ9UMZ2 1314 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 KAT6AQ92794 2004 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 PVALEFA0A1B0GWK0 134 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 GJA9P57773 515 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 NLRP12P59046 1061 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 MORC3Q14149 939 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 KCNB1Q14721 858 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 SH3TC2Q8TF17 1288 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 UPF3AQ9H1J1 476 aaKnown RBP19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 XPNPEP3Q9NQH7 507 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 PANK4Q9NVE7 773 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 ANO10Q9NW15 660 aa19.79■□□□□ 0.76
PTCHD3-202ENST00000622555 H3BRB1 525 aa19.78■□□□□ 0.76
PTCHD3-202ENST00000622555 TBCAO75347 108 aaKnown RBP19.78■□□□□ 0.76
PTCHD3-202ENST00000622555 PGK1P00558 417 aa19.78■□□□□ 0.76
PTCHD3-202ENST00000622555 MYL3P08590 195 aa19.78■□□□□ 0.76
PTCHD3-202ENST00000622555 HSPA1AP0DMV8 641 aaKnown RBP19.78■□□□□ 0.76
PTCHD3-202ENST00000622555 HSPA1BP0DMV9 641 aaKnown RBP19.78■□□□□ 0.76
PTCHD3-202ENST00000622555 CCDC65Q8IXS2 484 aa19.78■□□□□ 0.76
PTCHD3-202ENST00000622555 ZHX3Q9H4I2 956 aa19.78■□□□□ 0.76
PTCHD3-202ENST00000622555 TUT1Q9H6E5 874 aaKnown RBP19.78■□□□□ 0.76
PTCHD3-202ENST00000622555 HMX1Q9NP08 348 aaPredicted RBP19.78■□□□□ 0.76
PTCHD3-202ENST00000622555 DDX20Q9UHI6 824 aaKnown RBP19.78■□□□□ 0.76
PTCHD3-202ENST00000622555 MYADML2A6NDP7 307 aa19.77■□□□□ 0.76
PTCHD3-202ENST00000622555 GUCY2CP25092 1073 aa19.77■□□□□ 0.76
PTCHD3-202ENST00000622555 LBX1P52954 281 aa19.77■□□□□ 0.76
PTCHD3-202ENST00000622555 RNPEPQ9H4A4 650 aa19.77■□□□□ 0.76
PTCHD3-202ENST00000622555 RSPH10B2B2RC85 870 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 HBP1O60381 514 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 RHOBTB3O94955 611 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 RSPH10BP0C881 870 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 BMP6P22004 513 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 CTCFP49711 727 aaPredicted RBP19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 COASYQ13057 564 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 DPCR1Q3MIW9 517 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 GNASQ5JWF2 1037 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 MAEAQ7L5Y9 396 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 POLD4Q9HCU8 107 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 FRMPD3Q5JV73 1810 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 HIP1RO75146 1068 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 DGAT1O75907 488 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 FAM13AO94988 1023 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 POLGP54098 1239 aaPredicted RBP19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 TARBP2Q15633 366 aaKnown RBP19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 SLC9C1Q4G0N8 1177 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 ANO6Q4KMQ2 910 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 CTU1Q7Z7A3 348 aaKnown RBP19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 DNAJC25Q9H1X3 360 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 ATP6V0A4Q9HBG4 840 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 ODF2LQ9ULJ1 636 aa19.76■□□□□ 0.75
PTCHD3-202ENST00000622555 FRMD3A2A2Y4 597 aa19.75■□□□□ 0.75
PTCHD3-202ENST00000622555 MSCO60682 206 aa19.75■□□□□ 0.75
PTCHD3-202ENST00000622555 ADAMTS4O75173 837 aa19.75■□□□□ 0.75
PTCHD3-202ENST00000622555 MYCNP04198 464 aaPredicted RBP19.75■□□□□ 0.75
PTCHD3-202ENST00000622555 CHMP4BP1P59074 171 aa19.75■□□□□ 0.75
PTCHD3-202ENST00000622555 HERC4Q5GLZ8 1057 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms