RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 VSIG10LQ86VR7 867 aa11.6□□□□□ -0.55
VPS11-208ENST00000621676 CAPZA3Q96KX2 299 aa11.6□□□□□ -0.55
VPS11-208ENST00000621676 MMP19Q99542 508 aa11.6□□□□□ -0.55
VPS11-208ENST00000621676 LSM14BQ9BX40 385 aaKnown RBP11.6□□□□□ -0.55
VPS11-208ENST00000621676 GTPBP4Q9BZE4 634 aaKnown RBP11.6□□□□□ -0.55
VPS11-208ENST00000621676 NDST4Q9H3R1 872 aa11.6□□□□□ -0.55
VPS11-208ENST00000621676 PARVGQ9HBI0 331 aa11.6□□□□□ -0.55
VPS11-208ENST00000621676 PUF60Q9UHX1 559 aaKnown RBP11.6□□□□□ -0.55
VPS11-208ENST00000621676 POLGP54098 1239 aaPredicted RBP11.6□□□□□ -0.55
VPS11-208ENST00000621676 PI4K2AQ9BTU6 479 aa11.6□□□□□ -0.55
VPS11-208ENST00000621676 GLT8D2Q9H1C3 349 aa11.6□□□□□ -0.55
VPS11-208ENST00000621676 JADE2Q9NQC1 790 aa11.6□□□□□ -0.55
VPS11-208ENST00000621676 STK17AQ9UEE5 414 aa11.6□□□□□ -0.55
VPS11-208ENST00000621676 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.59□□□□□ -0.55
VPS11-208ENST00000621676 IQCA1LA6NCM1 817 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 DHX15O43143 795 aaKnown RBP11.59□□□□□ -0.55
VPS11-208ENST00000621676 BUB1O43683 1085 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 PRKCEQ02156 737 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 CST9Q5W186 159 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 UBE2Q2Q8WVN8 375 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 BRI3BPQ8WY22 251 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 NACC1Q96RE7 527 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 PTPN18Q99952 460 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 SLC9A2Q9UBY0 812 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 HYOU1Q9Y4L1 999 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 CXCR5P32302 372 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 TMEM119Q4V9L6 283 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 SCARA3Q6AZY7 606 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 CYP4F22Q6NT55 531 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 SARM1Q6SZW1 724 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 LBX2Q6XYB7 198 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 MB21D1Q8N884 522 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 FAM133AQ8N9E0 248 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 SYT2Q8N9I0 419 aaPredicted RBP11.59□□□□□ -0.55
VPS11-208ENST00000621676 PROCA1Q8NCQ7 364 aaPredicted RBP11.59□□□□□ -0.55
VPS11-208ENST00000621676 SPATA33Q96N06 139 aa11.59□□□□□ -0.55
VPS11-208ENST00000621676 CETN3O15182 167 aa11.58□□□□□ -0.55
VPS11-208ENST00000621676 TCF7P36402 384 aaPredicted RBP11.58□□□□□ -0.55
VPS11-208ENST00000621676 RARRES1P49788 294 aa11.58□□□□□ -0.55
VPS11-208ENST00000621676 CLCN3P51790 818 aa11.58□□□□□ -0.55
VPS11-208ENST00000621676 Q4G0T1 1027 aa11.58□□□□□ -0.55
VPS11-208ENST00000621676 ARHGAP29Q52LW3 1261 aa11.58□□□□□ -0.55
VPS11-208ENST00000621676 ZNF569Q5MCW4 686 aa11.58□□□□□ -0.55
VPS11-208ENST00000621676 APTXQ7Z2E3 356 aaKnown RBP11.58□□□□□ -0.55
VPS11-208ENST00000621676 DHX37Q8IY37 1157 aaKnown RBP11.58□□□□□ -0.55
VPS11-208ENST00000621676 CRYGNQ8WXF5 182 aa11.58□□□□□ -0.55
VPS11-208ENST00000621676 PPP1R13BQ96KQ4 1090 aa11.58□□□□□ -0.55
VPS11-208ENST00000621676 WDR24Q96S15 920 aa11.58□□□□□ -0.55
VPS11-208ENST00000621676 PCDHA10Q9Y5I2 948 aa11.58□□□□□ -0.55
VPS11-208ENST00000621676 LTBP3Q9NS15 1303 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 SSC5DA1L4H1 1573 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 DENND3A2RUS2 1198 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 HNRNPDLO14979 420 aaKnown RBP11.58□□□□□ -0.56
VPS11-208ENST00000621676 AKR1B10O60218 316 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 SRGAP2O75044 1071 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 P4HBP07237 508 aaKnown RBP11.58□□□□□ -0.56
VPS11-208ENST00000621676 ADORA2AP29274 412 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 HSD17B4P51659 736 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 KCNH2Q12809 1159 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 CCL14Q16627 93 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 TAF3Q5VWG9 929 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 BSNDQ8WZ55 320 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 KDM3AQ9Y4C1 1321 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 PRUNE2Q8WUY3 3088 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 A0A1B0GTH6 734 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 TTLL13PA6NNM8 815 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 GRIN3BO60391 1043 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 HOXD13P35453 343 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 TERF1P54274 439 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 FKBP3Q00688 224 aaKnown RBP11.58□□□□□ -0.56
VPS11-208ENST00000621676 TAF1CQ15572 869 aaPredicted RBP11.58□□□□□ -0.56
VPS11-208ENST00000621676 ZNF394Q53GI3 561 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 FAM182AQ5T1J6 154 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 KIAA1328Q86T90 577 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 SLC5A5Q92911 643 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 SPAG5Q96R06 1193 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 ZNF112Q9UJU3 913 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 COL4A3BPQ9Y5P4 624 aa11.58□□□□□ -0.56
VPS11-208ENST00000621676 DYNC1LI2O43237 492 aaPredicted RBP11.57□□□□□ -0.56
VPS11-208ENST00000621676 EYA4O95677 639 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 NR3C1P04150 777 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 UBA1P22314 1058 aaKnown RBP11.57□□□□□ -0.56
VPS11-208ENST00000621676 ERVK-24P63145 666 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 BEX3Q00994 111 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 SNAPC2Q13487 334 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 CDKAL1Q5VV42 579 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 ZNF746Q6NUN9 644 aaPredicted RBP11.57□□□□□ -0.56
VPS11-208ENST00000621676 RHPN2Q8IUC4 686 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 DAW1Q8N136 415 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 VTI1AQ96AJ9 217 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 HDAC6Q9UBN7 1215 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 ARMCX3Q9UH62 379 aaPredicted RBP11.57□□□□□ -0.56
VPS11-208ENST00000621676 PPP2R2CQ9Y2T4 447 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 BICDL2A1A5D9 508 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 WDR64B1ANS9 1081 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 ALDH5A1P51649 535 aaPredicted RBP11.57□□□□□ -0.56
VPS11-208ENST00000621676 ERVK-9P63128 1117 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 MAP2K1Q02750 393 aaPredicted RBP11.57□□□□□ -0.56
VPS11-208ENST00000621676 MAP3K10Q02779 954 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 EPHA7Q15375 998 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms