RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 EMILIN3Q9NT22 766 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 TYW1Q9NV66 732 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 DMAC2Q9NW81 257 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 TMEM51Q9NW97 253 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 WRAP73Q9P2S5 460 aaPredicted RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 PGAP2Q9UHJ9 254 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 FAM153AQ9UHL3 310 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 SYNPO2Q9UMS6 1093 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 PCDHA12Q9UN75 941 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 PACSIN2Q9UNF0 486 aaPredicted RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 RRP15Q9Y3B9 282 aaKnown RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 PCDHA1Q9Y5I3 950 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 NFS1Q9Y697 457 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 FNDC1Q4ZHG4 1894 aaPredicted RBP3.55□□□□□ -1.84
U1.39-201ENST00000621562 SSC5DA1L4H1 1573 aa3.55□□□□□ -1.84
U1.39-201ENST00000621562 PLXNB2O15031 1838 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 ZNF536O15090 1300 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 ATXN2Q99700 1313 aaKnown RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 ESYT3A0FGR9 886 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 GOLGA6BA6NDN3 693 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 YDJCA8MPS7 323 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 GOLGA8KD6RF30 607 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 MYO1CO00159 1063 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 MEIS1O00470 390 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 MPHOSPH10O00566 681 aaKnown RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 TRIM66O15016 1216 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 CETN3O15182 167 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 EIF3HO15372 352 aaKnown RBP eCLIP3.54□□□□□ -1.84
U1.39-201ENST00000621562 DDX3YO15523 660 aaKnown RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 ZEB2O60315 1214 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 ECE2O60344 883 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 ENTPD3O75355 529 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 GFPT2O94808 682 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 HEXIM1O94992 359 aaKnown RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 FOSP01100 380 aaPredicted RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 NR3C1P04150 777 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 SSBP05455 408 aaKnown RBP eCLIP3.54□□□□□ -1.84
U1.39-201ENST00000621562 IVLP07476 585 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 GAP43P17677 238 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 NMT1P30419 496 aaKnown RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 CORO7P57737 925 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 ICA1Q05084 483 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 PPATQ06203 517 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 KLHL30Q0D2K2 578 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 PPFIA1Q13136 1202 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 PABPC4Q13310 644 aaKnown RBP eCLIP3.54□□□□□ -1.84
U1.39-201ENST00000621562 PPP2R5CQ13362 524 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 ADAM9Q13443 819 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 COG2Q14746 738 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 KNOP1Q1ED39 458 aaKnown RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 CERKLQ49MI3 558 aaPredicted RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 SLC9C1Q4G0N8 1177 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 PRR16Q569H4 304 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 HERC4Q5GLZ8 1057 aaPredicted RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 C1orf220Q5T0J3 134 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 STRIP1Q5VSL9 837 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 MCTP2Q6DN12 878 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 RINT1Q6NUQ1 792 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 C8orf74Q6P047 294 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 GJB7Q6PEY0 223 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 KDM7AQ6ZMT4 941 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 CACNA2D4Q7Z3S7 1137 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 PODNQ7Z5L7 613 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 FBXO11Q86XK2 927 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 PALB2Q86YC2 1186 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 TEX2Q8IWB9 1127 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 KCTD17Q8N5Z5 321 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 METTL13Q8N6R0 699 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 EIF1ADQ8N9N8 165 aaKnown RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 LMO3Q8TAP4 145 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 FAM76AQ8TAV0 307 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 CYP2W1Q8TAV3 490 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 PLEKHO2Q8TD55 490 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 ACTRT1Q8TDG2 376 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 ATP8B4Q8TF62 1192 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 MASTLQ96GX5 879 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 HES6Q96HZ4 224 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 CALR3Q96L12 384 aaKnown RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 PSMB7Q99436 277 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 GMLQ99445 158 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 HSD17B14Q9BPX1 270 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 HINFPQ9BQA5 517 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 EIF2AK1Q9BQI3 630 aaKnown RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 PAGR1Q9BTK6 254 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 AMNQ9BXJ7 453 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 TXLNGYQ9BZA5 131 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 TANGO6Q9C0B7 1094 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 DEFB129Q9H1M3 183 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 RANBP17Q9H2T7 1088 aaKnown RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 EPB41L4BQ9H329 900 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 DEF6Q9H4E7 631 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 DBNDD1Q9H9R9 158 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 LRRC4CQ9HCJ2 640 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 TUFT1Q9NNX1 390 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 RNF14Q9UBS8 474 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 NAGPAQ9UK23 515 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 SERPINA10Q9UK55 444 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 TRPC5Q9UL62 973 aaPredicted RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 INTUQ9ULD6 942 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 PRR12Q9ULL5 1215 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms