RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 AAK1Q2M2I8 961 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 TCEAL5Q5H9L2 206 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 PLA2G4DQ86XP0 818 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 PLPP6Q8IY26 295 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 CRIPAKQ8N1N5 446 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 TMEM40Q8WWA1 233 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 GJA10Q969M2 543 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 LENG9Q96B70 501 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 ZNF689Q96CS4 500 aaPredicted RBP13.03□□□□□ -0.32
CPNE3-210ENST00000621245 PPP1R16BQ96T49 567 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 EPHX3Q9H6B9 360 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 HCSTQ9UBK5 93 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 TRPV2Q9Y5S1 764 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 DMDP11532 3685 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 POTEB3A0JP26 581 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 H3BQ06 376 aaPredicted RBP13.02□□□□□ -0.33
CPNE3-210ENST00000621245 TRIM66O15016 1216 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 FOSP01100 380 aaPredicted RBP13.02□□□□□ -0.33
CPNE3-210ENST00000621245 IBSPP21815 317 aaPredicted RBP13.02□□□□□ -0.33
CPNE3-210ENST00000621245 DNAJB1P25685 340 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 RCAN1P53805 252 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 PAN2Q504Q3 1202 aaKnown RBP13.02□□□□□ -0.33
CPNE3-210ENST00000621245 POTEBQ6S5H4 581 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 MTHFD1LQ6UB35 978 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 PLPPR4Q7Z2D5 763 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 IL17RAQ96F46 866 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 AGXT2Q9BYV1 514 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 AZI2Q9H6S1 392 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 VPS54Q9P1Q0 977 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 PADI3Q9ULW8 664 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 PCDHA2Q9Y5H9 948 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 MRPL42Q9Y6G3 142 aaKnown RBP13.02□□□□□ -0.33
CPNE3-210ENST00000621245 IGSF9BQ9UPX0 1349 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 ARID2Q68CP9 1835 aa13.02□□□□□ -0.33
CPNE3-210ENST00000621245 C2orf72A6NCS6 295 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 RRN3P2A6NIE6 340 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 hCG_1984214I3L0E3 225 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 DGKIO75912 1065 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 GTF2F1P35269 517 aaKnown RBP eCLIP13.01□□□□□ -0.33
CPNE3-210ENST00000621245 ZNF76P36508 570 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 CCT2P78371 535 aaKnown RBP13.01□□□□□ -0.33
CPNE3-210ENST00000621245 TOB2Q14106 344 aaPredicted RBP13.01□□□□□ -0.33
CPNE3-210ENST00000621245 BLOC1S2Q6QNY1 142 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 NIPA1Q7RTP0 329 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 RSPH3Q86UC2 560 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 FIBCD1Q8N539 461 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 ZNF713Q8N859 430 aaPredicted RBP13.01□□□□□ -0.33
CPNE3-210ENST00000621245 BANK1Q8NDB2 785 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 SAMD11Q96NU1 681 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 TMEM121BQ9BXQ6 578 aaPredicted RBP13.01□□□□□ -0.33
CPNE3-210ENST00000621245 ZMYND12Q9H0C1 365 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 C11orf16Q9NQ32 467 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 PCDHGC5Q9Y5F6 944 aa13.01□□□□□ -0.33
CPNE3-210ENST00000621245 SMIM35A0A1B0GVV1 85 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 ESYT2A0FGR8 921 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 FAM86C2PA6NEL3 165 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 IPO5O00410 1097 aaKnown RBP13□□□□□ -0.33
CPNE3-210ENST00000621245 BACH1O14867 736 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 LINC01565O15544 149 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 PRPF3O43395 683 aaKnown RBP13□□□□□ -0.33
CPNE3-210ENST00000621245 CYP3A4P08684 503 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 HMGB1P09429 215 aaKnown RBP13□□□□□ -0.33
CPNE3-210ENST00000621245 KLRC1P26715 233 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 PDIA3P30101 505 aaKnown RBP13□□□□□ -0.33
CPNE3-210ENST00000621245 LTBRP36941 435 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 FGD1P98174 961 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 DLX2Q07687 328 aaPredicted RBP13□□□□□ -0.33
CPNE3-210ENST00000621245 CAMK1Q14012 370 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 COL19A1Q14993 1142 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 UGCGQ16739 394 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 LEXMQ3ZCV2 418 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 SWSAP1Q6NVH7 229 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 TRMT1LQ7Z2T5 733 aaKnown RBP13□□□□□ -0.33
CPNE3-210ENST00000621245 KIAA0319LQ8IZA0 1049 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 REXO1Q8N1G1 1221 aaKnown RBP13□□□□□ -0.33
CPNE3-210ENST00000621245 NEK9Q8TD19 979 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 ATP8B4Q8TF62 1192 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 CLP1Q92989 425 aaKnown RBP13□□□□□ -0.33
CPNE3-210ENST00000621245 AIFM3Q96NN9 605 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 SLC26A6Q9BXS9 759 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 CELF4Q9BZC1 486 aaKnown RBP13□□□□□ -0.33
CPNE3-210ENST00000621245 KDM4CQ9H3R0 1056 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 ERVK-5Q9HDB9 667 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 ALG13Q9NP73 1137 aaKnown RBP13□□□□□ -0.33
CPNE3-210ENST00000621245 ZNF302Q9NR11 478 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 GINS2Q9Y248 185 aa13□□□□□ -0.33
CPNE3-210ENST00000621245 NOC2LQ9Y3T9 749 aaKnown RBP13□□□□□ -0.33
CPNE3-210ENST00000621245 C5orf67F2Z3F1 127 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 C22orf31O95567 290 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 VTNP04004 478 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 BMPR1AP36894 532 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 KRT76Q01546 638 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 HYAL1Q12794 435 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 PAK2Q13177 524 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 BTG3Q14201 252 aaPredicted RBP12.99□□□□□ -0.33
CPNE3-210ENST00000621245 CLUL1Q15846 466 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 TIGD5Q53EQ6 642 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 PRR16Q569H4 304 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 IER5Q5VY09 327 aa12.99□□□□□ -0.33
CPNE3-210ENST00000621245 PTCRAQ6ISU1 281 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms