RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 AADACL2Q6P093 401 aa7.56□□□□□ -1.2
NEDD9-216ENST00000620854 C6orf89Q6UWU4 347 aa7.56□□□□□ -1.2
NEDD9-216ENST00000620854 ARHGAP27Q6ZUM4 889 aa7.56□□□□□ -1.2
NEDD9-216ENST00000620854 SH3RF3Q8TEJ3 882 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-216ENST00000620854 MRRFQ96E11 262 aaKnown RBP7.56□□□□□ -1.2
NEDD9-216ENST00000620854 BICD1Q96G01 975 aa7.56□□□□□ -1.2
NEDD9-216ENST00000620854 PNMA5Q96PV4 448 aa7.56□□□□□ -1.2
NEDD9-216ENST00000620854 BCAS3Q9H6U6 928 aa7.56□□□□□ -1.2
NEDD9-216ENST00000620854 OSGEPQ9NPF4 335 aa7.56□□□□□ -1.2
NEDD9-216ENST00000620854 DNAJC17Q9NVM6 304 aaKnown RBP7.56□□□□□ -1.2
NEDD9-216ENST00000620854 MCM8Q9UJA3 840 aa7.56□□□□□ -1.2
NEDD9-216ENST00000620854 UTP11Q9Y3A2 253 aaKnown RBP7.56□□□□□ -1.2
NEDD9-216ENST00000620854 SFI1A8K8P3 1242 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 PGRMC1O00264 195 aaKnown RBP7.55□□□□□ -1.2
NEDD9-216ENST00000620854 MMEP08473 750 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 EEF2P13639 858 aaKnown RBP7.55□□□□□ -1.2
NEDD9-216ENST00000620854 CHN1P15882 459 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 SP4Q02446 784 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 UBAP2Q5T6F2 1119 aaKnown RBP7.55□□□□□ -1.2
NEDD9-216ENST00000620854 NAIF1Q69YI7 327 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-216ENST00000620854 STXBP4Q6ZWJ1 553 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 HS2ST1Q7LGA3 356 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 GUF1Q8N442 669 aaKnown RBP7.55□□□□□ -1.2
NEDD9-216ENST00000620854 COA1Q9GZY4 146 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 IKZF4Q9H2S9 585 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 CEP72Q9P209 647 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 SLC12A6Q9UHW9 1150 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 DBR1Q9UK59 544 aaKnown RBP7.55□□□□□ -1.2
NEDD9-216ENST00000620854 PCDHB13Q9Y5F0 798 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 SSU72P8A0A1W2PR75 194 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 PJA2O43164 708 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 C21orf2O43822 256 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 NR2F2P24468 414 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 COASYQ13057 564 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 GPR162Q16538 588 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 LRRC47Q8N1G4 583 aaKnown RBP7.55□□□□□ -1.2
NEDD9-216ENST00000620854 NSMCE1Q8WV22 266 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 PRCCQ92733 491 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-216ENST00000620854 PRMT1Q99873 361 aaKnown RBP7.55□□□□□ -1.2
NEDD9-216ENST00000620854 LBHD1Q9BQE6 289 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-216ENST00000620854 PLCB1Q9NQ66 1216 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 TMOD4Q9NZQ9 345 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 RNF14Q9UBS8 474 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 PTPN22Q9Y2R2 807 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 USP17L5A8MUK1 530 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 ORC4O43929 436 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 GFPT2O94808 682 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 ECHS1P30084 290 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 SLC16A2P36021 539 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 ZKSCAN8Q15776 578 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-216ENST00000620854 CCDC6Q16204 474 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 KRT25Q7Z3Z0 450 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 CCDC63Q8NA47 563 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 MICAL1Q8TDZ2 1067 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 AK8Q96MA6 479 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 PSMD1Q99460 953 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 NOD2Q9HC29 1040 aa7.55□□□□□ -1.2
NEDD9-216ENST00000620854 ZNF142P52746 1687 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-216ENST00000620854 H0YGN5 161 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 CHMP2AO43633 222 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 FAM13AO94988 1023 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 STAT3P40763 770 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 TNFAIP1Q13829 316 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 GRIK5Q16478 980 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 DALRD3Q5D0E6 543 aaKnown RBP7.54□□□□□ -1.2
NEDD9-216ENST00000620854 ZNF572Q7Z3I7 529 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-216ENST00000620854 YTHDF3Q7Z739 585 aaKnown RBP7.54□□□□□ -1.2
NEDD9-216ENST00000620854 LRRC34Q8IZ02 419 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 RTKN2Q8IZC4 609 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 RDH13Q8NBN7 331 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 CCDC197Q8NCU1 140 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 KCNV2Q8TDN2 545 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 CHMP6Q96FZ7 201 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 FMO2Q99518 471 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 FAM167BQ9BTA0 163 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 AZI2Q9H6S1 392 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 ARHGEF10LQ9HCE6 1279 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 HOMER2Q9NSB8 354 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 NFS1Q9Y697 457 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 PCNTO95613 3336 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 M0R2N6 131 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 LCA5LO95447 670 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 LRRC63Q05C16 580 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 GSTA5Q7RTV2 222 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 CCDC50Q8IVM0 306 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 ANKS4BQ8N8V4 417 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 ANKRD42Q8N9B4 389 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 CUEDC2Q9H467 287 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 EMILIN3Q9NT22 766 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 INTS9Q9NV88 658 aaKnown RBP7.54□□□□□ -1.2
NEDD9-216ENST00000620854 PIM2Q9P1W9 311 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 BCL9LQ86UU0 1499 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 A0A1B0GUA9 196 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 POTEB3A0JP26 581 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 POTECB2RU33 542 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 FGFR4P22455 802 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 ZBTB16Q05516 673 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 SLC29A2Q14542 456 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 POTEBQ6S5H4 581 aa7.54□□□□□ -1.2
NEDD9-216ENST00000620854 SLC30A10Q6XR72 485 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms