RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 BAIAP2L1Q9UHR4 511 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 GINS2Q9Y248 185 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 FHOD1Q9Y613 1164 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 CTNND1O60716 968 aaKnown RBP15.04■□□□□ -0
CNOT3-210ENST00000618939 MYCNP04198 464 aaPredicted RBP15.04■□□□□ -0
CNOT3-210ENST00000618939 SLC27A3Q5K4L6 730 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 XXYLT1Q8NBI6 393 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 HNRNPLLQ8WVV9 542 aaKnown RBP15.04■□□□□ -0
CNOT3-210ENST00000618939 SUGCTQ9HAC7 445 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 RGL1Q9NZL6 768 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.04■□□□□ -0
CNOT3-210ENST00000618939 EYA4O95677 639 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 GCLMP48507 274 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 IRX3P78415 501 aaPredicted RBP15.03■□□□□ -0
CNOT3-210ENST00000618939 SNX1Q13596 522 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 CCDC13Q8IYE1 715 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 ZNF341Q9BYN7 854 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 PLAGL2Q9UPG8 496 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 PCDHB4Q9Y5E5 795 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 EIF3BP55884 814 aaKnown RBP15.03■□□□□ -0
CNOT3-210ENST00000618939 ATP11AP98196 1134 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 MDM2Q00987 491 aaPredicted RBP15.03■□□□□ -0
CNOT3-210ENST00000618939 CCDC93Q567U6 631 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 CCNI2Q6ZMN8 369 aaPredicted RBP15.03■□□□□ -0
CNOT3-210ENST00000618939 CDC42EP5Q6NZY7 148 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 GLYCTKQ8IVS8 523 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 LRRN4CLQ8ND94 238 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 SLC7A3Q8WY07 619 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 P3H4Q92791 437 aa15.03■□□□□ -0
CNOT3-210ENST00000618939 RSRC1Q96IZ7 334 aaKnown RBP15.03■□□□□ -0
CNOT3-210ENST00000618939 MIF4GDA9UHW6 222 aaKnown RBP15.02■□□□□ -0
CNOT3-210ENST00000618939 SLC37A4O43826 429 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 TRIM49P0CI25 452 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 TRIM49CP0CI26 452 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 BMP6P22004 513 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 PPP2R5AQ15172 486 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 KAZNQ674X7 775 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 GJD4Q96KN9 370 aaPredicted RBP15.02■□□□□ -0
CNOT3-210ENST00000618939 PNKPQ96T60 521 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 AFF2P51816 1311 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 NDUFB10O96000 172 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 GRB10Q13322 594 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 EDRF1Q3B7T1 1238 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 CAPN12Q6ZSI9 719 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 FAM81BQ96LP2 452 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.02■□□□□ -02e-7■■■■□ 22.3
CNOT3-210ENST00000618939 FUT8Q9BYC5 575 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 KCND1Q9NSA2 647 aa15.02■□□□□ -0
CNOT3-210ENST00000618939 DIS3Q9Y2L1 958 aaKnown RBP15.02■□□□□ -0
CNOT3-210ENST00000618939 FMN2Q9NZ56 1722 aa15.02□□□□□ -0.01
CNOT3-210ENST00000618939 SLCO1A2P46721 670 aa15.02□□□□□ -0.01
CNOT3-210ENST00000618939 CCDC197Q8NCU1 140 aa15.02□□□□□ -0.01
CNOT3-210ENST00000618939 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.02□□□□□ -0.013e-6■■■■□ 21.2
CNOT3-210ENST00000618939 NYAP2Q9P242 653 aa15.02□□□□□ -0.01
CNOT3-210ENST00000618939 KLHL14Q9P2G3 628 aa15.02□□□□□ -0.01
CNOT3-210ENST00000618939 ABCB11O95342 1321 aa15.02□□□□□ -0.01
CNOT3-210ENST00000618939 IPO5O00410 1097 aaKnown RBP15.02□□□□□ -0.01
CNOT3-210ENST00000618939 TMEM191BP0C7N4 346 aa15.02□□□□□ -0.01
CNOT3-210ENST00000618939 SLMAPQ14BN4 828 aa15.02□□□□□ -0.01
CNOT3-210ENST00000618939 APBB1IPQ7Z5R6 666 aaPredicted RBP15.02□□□□□ -0.01
CNOT3-210ENST00000618939 RSAD2Q8WXG1 361 aa15.02□□□□□ -0.01
CNOT3-210ENST00000618939 REEP2Q9BRK0 252 aa15.02□□□□□ -0.01
CNOT3-210ENST00000618939 TAF1DQ9H5J8 278 aaPredicted RBP15.02□□□□□ -0.01
CNOT3-210ENST00000618939 SNX24Q9Y343 169 aa15.02□□□□□ -0.01
CNOT3-210ENST00000618939 SMIM22K7EJ46 135 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 C21orf2O43822 256 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 NMT1P30419 496 aaKnown RBP15.01□□□□□ -0.01
CNOT3-210ENST00000618939 BFSP1Q12934 665 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 HADHQ16836 314 aaKnown RBP15.01□□□□□ -0.01
CNOT3-210ENST00000618939 MS4A14Q96JA4 679 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 CNOT10Q9H9A5 744 aaKnown RBP15.01□□□□□ -0.01
CNOT3-210ENST00000618939 NRBP2Q9NSY0 501 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 VGLL3A8MV65 326 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 PLEKP08567 350 aaPredicted RBP15.01□□□□□ -0.01
CNOT3-210ENST00000618939 UCHL3P15374 230 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 CDHR1Q96JP9 859 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 LXNQ9BS40 222 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 INTS2Q9H0H0 1204 aaKnown RBP15.01□□□□□ -0.01
CNOT3-210ENST00000618939 SYNGAP1Q96PV0 1343 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 TBX3O15119 743 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 ACTN1P12814 892 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 POLR2BP30876 1174 aaKnown RBP15.01□□□□□ -0.01
CNOT3-210ENST00000618939 RWDD2BP57060 319 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 MTMR1Q13613 665 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 HHIPL2Q6UWX4 724 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 RUBCNQ92622 972 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 PAGR1Q9BTK6 254 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 IL17RBQ9NRM6 502 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 NOC2LQ9Y3T9 749 aaKnown RBP15.01□□□□□ -0.01
CNOT3-210ENST00000618939 FAM169AQ9Y6X4 670 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 KIF1AQ12756 1690 aa15.01□□□□□ -0.01
CNOT3-210ENST00000618939 BUB1BO60566 1050 aaPredicted RBP15□□□□□ -0.01
CNOT3-210ENST00000618939 TNNC2P02585 160 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 TMOD1P28289 359 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 BRDTQ58F21 947 aaPredicted RBP15□□□□□ -0.01
CNOT3-210ENST00000618939 SH3RF1Q7Z6J0 888 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 TRPC6Q9Y210 931 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 GPC5P78333 572 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 MTERF2Q49AM1 385 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 CEP55Q53EZ4 464 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms