RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TTC8Q8TAM2 541 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 HOXC10Q9NYD6 342 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 PTPRTO14522 1441 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 PODXLO00592 558 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 CTNND1O60716 968 aaKnown RBP11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 HUS1O60921 280 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 SLC16A2P36021 539 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 NSUN2Q08J23 767 aaKnown RBP eCLIP11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 RHOT2Q8IXI1 618 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 DCAF4Q8WV16 495 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 EAF2Q96CJ1 260 aaPredicted RBP11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 OTUB1Q96FW1 271 aaPredicted RBP11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 ZNF189O75820 626 aaPredicted RBP11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 ADD2P35612 726 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 ZNF699Q32M78 642 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 ZNF667Q5HYK9 610 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 KRT27Q7Z3Y8 459 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 PDCD6IPQ8WUM4 868 aaKnown RBP11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 ZMYND12Q9H0C1 365 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 NHEJ1Q9H9Q4 299 aaPredicted RBP11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 ATP6V0A4Q9HBG4 840 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 ATG3Q9NT62 314 aa11.96□□□□□ -0.49
CCDC144B-208ENST00000618081 CALB1P05937 261 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 PLCG1P19174 1290 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 MECOMQ03112 1051 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 TTLL6Q8N841 843 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 KDM4CQ9H3R0 1056 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 SFMBT1Q9UHJ3 866 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 NEO1Q92859 1461 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 NLRP1Q9C000 1473 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 DCTN3O75935 186 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 FSCBQ5H9T9 825 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 TTC23LQ6PF05 361 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 MCPH1Q8NEM0 835 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 DYRK4Q9NR20 520 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 EMILIN3Q9NT22 766 aa11.96□□□□□ -0.5
CCDC144B-208ENST00000618081 UBN2Q6ZU65 1347 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 RBL2Q08999 1139 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 MTMR1Q13613 665 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 ZBTB41Q5SVQ8 909 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 ALS2CLQ60I27 953 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 BEST2Q8NFU1 509 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 SCOCQ9UIL1 159 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 PYGBP11216 843 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 CIAPIN1Q6FI81 312 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 TMEM179Q6ZVK1 233 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 EXT2Q93063 718 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 PPP1R16BQ96T49 567 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 FAM49AQ9H0Q0 323 aaPredicted RBP11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 COPRSQ9NQ92 184 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 TRPA1O75762 1119 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 KRT37O76014 449 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 MYCP01106 439 aaPredicted RBP11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 ACAD11Q709F0 780 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 ARHGEF1Q92888 912 aaKnown RBP11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 ACAP3Q96P50 834 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 GCOM2Q9BZD3 368 aaPredicted RBP11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 TMEM63CQ9P1W3 806 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 FBXO40Q9UH90 709 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 E2F6O75461 281 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 ANP32DO95626 131 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 HSPA4LO95757 839 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 MAPK6Q16659 721 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 ENOX1Q8TC92 643 aaKnown RBP11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 DDX50Q9BQ39 737 aaKnown RBP11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 ASPSCR1Q9BZE9 553 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 ZWILCHQ9H900 591 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 MTMR6Q9Y217 621 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 IKBKBO14920 756 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 RPAP1Q9BWH6 1393 aaPredicted RBP11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 ERVV-1B6SEH8 477 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 HABP4Q5JVS0 413 aaKnown RBP11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 TADA2BQ86TJ2 420 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 APOBEC3FQ8IUX4 373 aaKnown RBP11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 SLC35F6Q8N357 371 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 RBM41Q96IZ5 413 aaKnown RBP11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 ASNSD1Q9NWL6 643 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 SKIP12755 728 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 RAP1GDS1P52306 607 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 WASHC5Q12768 1159 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 MKRN3Q13064 507 aaKnown RBP11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 MIGA2Q7L4E1 593 aa11.95□□□□□ -0.5
CCDC144B-208ENST00000618081 TTC13Q8NBP0 860 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 BANK1Q8NDB2 785 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 ANLNQ9NQW6 1124 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 MORF4L2Q15014 288 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 STXBP2Q15833 593 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 TRIM54Q9BYV2 358 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 COA1Q9GZY4 146 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 BCL2L12Q9HB09 334 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 PCDHA13Q9Y5I0 950 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 ZBBXA8MT70 800 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 TBXAS1P24557 533 aaPredicted RBP11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 CXCR5P32302 372 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 DHX9Q08211 1270 aaKnown RBP11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 ARL6IP4Q66PJ3 421 aaKnown RBP11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 TMED8Q6PL24 325 aaPredicted RBP11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 USP17L2Q6R6M4 530 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 KLHL29Q96CT2 875 aa11.94□□□□□ -0.5
CCDC144B-208ENST00000618081 PIGSQ96S52 555 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms