RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 ITIH4Q14624 930 aa16.9■□□□□ 0.3
SYNRG-223ENST00000616179 HDAC9Q9UKV0 1011 aa16.9■□□□□ 0.3
SYNRG-223ENST00000616179 BCS1LQ9Y276 419 aa16.9■□□□□ 0.3
SYNRG-223ENST00000616179 ABCC6O95255 1503 aa16.9■□□□□ 0.3
SYNRG-223ENST00000616179 FAM205AQ6ZU69 1335 aa16.9■□□□□ 0.3
SYNRG-223ENST00000616179 KLRF2D3W0D1 207 aa16.9■□□□□ 0.3
SYNRG-223ENST00000616179 TBCAO75347 108 aaKnown RBP16.9■□□□□ 0.3
SYNRG-223ENST00000616179 CDK17Q00537 523 aa16.9■□□□□ 0.3
SYNRG-223ENST00000616179 IL9RQ01113 521 aa16.9■□□□□ 0.3
SYNRG-223ENST00000616179 KCNMA1Q12791 1236 aa16.9■□□□□ 0.3
SYNRG-223ENST00000616179 GLYCTKQ8IVS8 523 aa16.9■□□□□ 0.3
SYNRG-223ENST00000616179 TAB3Q8N5C8 712 aaPredicted RBP16.9■□□□□ 0.3
SYNRG-223ENST00000616179 CFAP61Q8NHU2 1237 aa16.9■□□□□ 0.3
SYNRG-223ENST00000616179 FOXO6A8MYZ6 492 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 KCNA3P22001 575 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 LRRC63Q05C16 580 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 KIAA1755Q5JYT7 1200 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 CHADLQ6NUI6 762 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 CRELD2Q6UXH1 353 aaPredicted RBP16.89■□□□□ 0.29
SYNRG-223ENST00000616179 PURBQ96QR8 312 aaKnown RBP16.89■□□□□ 0.29
SYNRG-223ENST00000616179 ARHGEF10LQ9HCE6 1279 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 CORO1CQ9ULV4 474 aaPredicted RBP16.89■□□□□ 0.29
SYNRG-223ENST00000616179 KIAA1024Q9UPX6 916 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 PDE8AO60658 829 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 NCALDP61601 193 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 USP4Q13107 963 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 HS2ST1Q7LGA3 356 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 GLIS3Q8NEA6 775 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 TBX22Q9Y458 520 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 USP17L3A6NCW0 530 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 USP17L4A6NCW7 530 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 IRF6O14896 467 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 TNFRSF8P28908 595 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 MRPS35P82673 323 aaKnown RBP16.89■□□□□ 0.29
SYNRG-223ENST00000616179 NAALADL2Q58DX5 795 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 UNC13DQ70J99 1090 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 USP17L1Q7RTZ2 530 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 KIAA0895Q8NCT3 520 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 INPP4AQ96PE3 977 aaPredicted RBP16.89■□□□□ 0.29
SYNRG-223ENST00000616179 PABPC3Q9H361 631 aaKnown RBP16.89■□□□□ 0.29
SYNRG-223ENST00000616179 RHBDL2Q9NX52 303 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 PARP2Q9UGN5 583 aa16.89■□□□□ 0.29
SYNRG-223ENST00000616179 F8W031 263 aaPredicted RBP16.88■□□□□ 0.29
SYNRG-223ENST00000616179 TOM1O60784 492 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 FYB2Q5VWT5 728 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 ARHGEF18Q6ZSZ5 1173 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 MAGEC3Q8TD91 643 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 NT5C3AQ9H0P0 336 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 GPCPD1Q9NPB8 672 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 ASAP1Q9ULH1 1129 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 AGTP01019 485 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 LACTB2Q53H82 288 aaPredicted RBP16.88■□□□□ 0.29
SYNRG-223ENST00000616179 DYNLL2Q96FJ2 89 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 SMC6Q96SB8 1091 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 TFCP2L1Q9NZI6 479 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 ZNF76P36508 570 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 PLCB3Q01970 1234 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 DBN1Q16643 649 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 RNF220Q5VTB9 566 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 ERP44Q9BS26 406 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 VPS37BQ9H9H4 285 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 KBTBD4Q9NVX7 518 aa16.88■□□□□ 0.29
SYNRG-223ENST00000616179 GCNT3O95395 438 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 TROAPQ12815 778 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 FIGNQ5HY92 759 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 GJB7Q6PEY0 223 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 PHLDB2Q86SQ0 1253 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 JAMLQ86YT9 394 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.87■□□□□ 0.29
SYNRG-223ENST00000616179 NVLO15381 856 aaKnown RBP16.87■□□□□ 0.29
SYNRG-223ENST00000616179 ASAP2O43150 1006 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 GRIK3Q13003 919 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 DNAJC3Q13217 504 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 NBPF20Q3BBV1 942 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 OSGEPQ9NPF4 335 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 GCNT4Q9P109 453 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 STOML1Q9UBI4 398 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 SIK3Q9Y2K2 1263 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 CHD1O14646 1710 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 SPDYE5A6NIY4 337 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 MAPK13O15264 365 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 KLRC4O43908 158 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 PYGLP06737 847 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 EEF2P13639 858 aaKnown RBP16.87■□□□□ 0.29
SYNRG-223ENST00000616179 DEUP1Q05D60 604 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 PIGOQ8TEQ8 1089 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 C18orf8Q96DM3 657 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 RUNDC3BQ96NL0 473 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 TTYH3Q9C0H2 523 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 CCSER1Q9C0I3 900 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 RIC8AQ9NPQ8 531 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 EMILIN3Q9NT22 766 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 TMEM260Q9NX78 707 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 FBXO3Q9UK99 471 aa16.87■□□□□ 0.29
SYNRG-223ENST00000616179 A0A0G2JND7 137 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 SNX3O60493 162 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 ZNF662Q6ZS27 426 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 MAB21L3Q8N8X9 362 aa16.86■□□□□ 0.29
SYNRG-223ENST00000616179 DDX27Q96GQ7 796 aaKnown RBP16.86■□□□□ 0.29
SYNRG-223ENST00000616179 AK8Q96MA6 479 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms