RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CCSER1Q9C0I3 900 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 RAB17Q9H0T7 212 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 DGAT1O75907 488 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 YWHABP31946 246 aaKnown RBP10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 KNOP1Q1ED39 458 aaKnown RBP10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 TCP11X2Q5H9J9 407 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 CROCCP2Q86T23 111 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 DESI2Q9BSY9 194 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 FAM107BQ9H098 131 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 MAP3K20Q9NYL2 800 aaKnown RBP10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 SLC12A6Q9UHW9 1150 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 SMIM23A6NLE4 172 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 KCNK3O14649 394 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 TCP1P17987 556 aaKnown RBP10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 ARPP19P56211 112 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 SARNPP82979 210 aaKnown RBP10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 NBPF12Q5TAG4 269 aaPredicted RBP10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 FKBP1CQ5VVH2 108 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 KRT222Q8N1A0 295 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 THEM5Q8N1Q8 247 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 ZNF653Q96CK0 615 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 AGBL1Q96MI9 1066 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 RIT2Q99578 217 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 SELENOSQ9BQE4 189 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 MRPL47Q9HD33 250 aaKnown RBP10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 TMX2Q9Y320 296 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 C6orf222P0C671 652 aaPredicted RBP10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 PPFIA1Q13136 1202 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 NAALADL2Q58DX5 795 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 LRRC8AQ8IWT6 810 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 FMR1NBQ8N0W7 255 aaPredicted RBP10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 GMCL1P1Q8NEA9 526 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 ACER1Q8TDN7 264 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 FAM163AQ96GL9 167 aaPredicted RBP10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 GMCL1Q96IK5 515 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 MXRA8Q9BRK3 442 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 CARD6Q9BX69 1037 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 TRIM31Q9BZY9 425 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 ZMYND15Q9H091 742 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 MYOM1P52179 1685 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 DDTLA6NHG4 134 aaPredicted RBP10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 MAGEB2O15479 319 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 CD58P19256 250 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 USP50Q70EL3 339 aaPredicted RBP10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 TAOK1Q7L7X3 1001 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 SIX6OS1Q8N1H7 587 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 MAD2L2Q9UI95 211 aa10.23□□□□□ -0.77
CLTCL1-208ENST00000615606 BUB1O43683 1085 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 GFPT2O94808 682 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 RGS2P41220 211 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 GPC3P51654 580 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 TROAPQ12815 778 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 PAK2Q13177 524 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 WHAMMP3Q1A5X7 153 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 KCTD17Q8N5Z5 321 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 HEXIM2Q96MH2 286 aaKnown RBP10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 MROH8Q9H579 483 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 INPP5FQ9Y2H2 1132 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 A0A087WWV3 80 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 PP2D1A8MPX8 630 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 UAP1Q16222 522 aaPredicted RBP10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 C10orf76Q5T2E6 689 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 RINT1Q6NUQ1 792 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 PTF1AQ7RTS3 328 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 HDXQ7Z353 690 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 GUF1Q8N442 669 aaKnown RBP10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 OR6B3Q8NGW1 331 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 IDI2Q9BXS1 227 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 ODF2LQ9ULJ1 636 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 KIAA0391O15091 583 aaKnown RBP10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 HIP1RO75146 1068 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 RARBP10826 455 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 ITIH3Q06033 890 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 RBL2Q08999 1139 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 DNAJC24Q6P3W2 148 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 GCNAQ96QF7 691 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 FAM213AQ9BRX8 229 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 SYNJ2BP-COX16A0A087WUM0 186 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 FAM170AA1A519 330 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 WNT10BO00744 389 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 ALDH3A1P30838 453 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 MXD4Q14582 209 aaPredicted RBP10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 KRT31Q15323 416 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 SCARA5Q6ZMJ2 495 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 GPRASP2Q96D09 838 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 BCL2L12Q9HB09 334 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 KCND2Q9NZV8 630 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 COX16Q9P0S2 106 aa10.22□□□□□ -0.77
CLTCL1-208ENST00000615606 PHLPP1O60346 1717 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 HUS1O60921 280 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 SERPING1P05155 500 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 MAPK4P31152 587 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 INPP5BP32019 993 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 LGSNQ5TDP6 509 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 BBS5Q8N3I7 341 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 FAM133AQ8N9E0 248 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 RDM1Q8NG50 284 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 RRAGCQ9HB90 399 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 SENP2Q9HC62 589 aa10.21□□□□□ -0.77
CLTCL1-208ENST00000615606 FBXO2Q9UK22 296 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms