RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 NSUN4Q96CB9 384 aaKnown RBP13□□□□□ -0.33
TP53-220ENST00000610623 EEF2KMTQ96G04 330 aa13□□□□□ -0.33
TP53-220ENST00000610623 FAM210AQ96ND0 272 aa13□□□□□ -0.33
TP53-220ENST00000610623 BAZ2AQ9UIF9 1905 aaKnown RBP12.99□□□□□ -0.33
TP53-220ENST00000610623 IRS2Q9Y4H2 1338 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 BTNL10A8MVZ5 291 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 AP1G2O75843 785 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 MMEP08473 750 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 KLRC1P26715 233 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 MMP13P45452 471 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 NLRP5P59047 1200 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 RPS6KA1Q15418 735 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 CCDC38Q502W7 563 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 TDRD12Q587J7 1177 aaKnown RBP12.99□□□□□ -0.33
TP53-220ENST00000610623 NEUROG2Q9H2A3 272 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 ZFATQ9P243 1243 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 hCG_1642624A0A1W2PR95 340 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 WTIPA6NIX2 430 aaPredicted RBP12.99□□□□□ -0.33
TP53-220ENST00000610623 ABLIM1O14639 778 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 EVI5O60447 810 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 PLEKHA8P1O95397 391 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 LINGO3P0C6S8 592 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 CHN1P15882 459 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 TIE1P35590 1138 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 DNA2P51530 1060 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 RNASE9P60153 205 aaKnown RBP12.99□□□□□ -0.33
TP53-220ENST00000610623 STK4Q13043 487 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 CENPPQ6IPU0 288 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 CNNM4Q6P4Q7 775 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 DDX42Q86XP3 938 aaKnown RBP eCLIP12.99□□□□□ -0.33
TP53-220ENST00000610623 MDM1Q8TC05 714 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 SDR42E1Q8WUS8 393 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 ATXN2LQ8WWM7 1075 aaKnown RBP12.99□□□□□ -0.33
TP53-220ENST00000610623 ANKS1AQ92625 1134 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 CRNKL1Q9BZJ0 848 aaKnown RBP12.99□□□□□ -0.33
TP53-220ENST00000610623 YIPF3Q9GZM5 350 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 SLITRK6Q9H5Y7 841 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 FAM114A2Q9NRY5 505 aa12.99□□□□□ -0.33
TP53-220ENST00000610623 MINDY4BA8MYZ0 360 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 KCNK3O14649 394 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 FGRP09769 529 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 ATP2A2P16615 1042 aaKnown RBP12.98□□□□□ -0.33
TP53-220ENST00000610623 HSPA1LP34931 641 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 NT5C2P49902 561 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 ALDH5A1P51649 535 aaPredicted RBP12.98□□□□□ -0.33
TP53-220ENST00000610623 MECOMQ03112 1051 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 PPARDQ03181 441 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 DHX9Q08211 1270 aaKnown RBP12.98□□□□□ -0.33
TP53-220ENST00000610623 SLC18A3Q16572 532 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 SLC5A9Q2M3M2 681 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 FAM133BQ5BKY9 247 aaKnown RBP12.98□□□□□ -0.33
TP53-220ENST00000610623 ANKRD20A2Q5SQ80 823 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 THEMIS2Q5TEJ8 643 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 ANKRD20A1Q5TYW2 823 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 ANKRD20A3Q5VUR7 823 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 C15orf52Q6ZUT6 534 aaKnown RBP12.98□□□□□ -0.33
TP53-220ENST00000610623 TMTC3Q6ZXV5 915 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 PGM2Q96G03 612 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 IFT74Q96LB3 600 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 C7orf25Q9BPX7 421 aa12.98□□□□□ -0.33
TP53-220ENST00000610623 UNCXA6NJT0 531 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 PGRMC1O00264 195 aaKnown RBP12.97□□□□□ -0.33
TP53-220ENST00000610623 TBC1D12O60347 775 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 PPFIA2O75334 1257 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 RARAP10276 462 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 KLRK1P26718 216 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 CALML3P27482 149 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 FLT3P36888 993 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 PAPOLAP51003 745 aaKnown RBP12.97□□□□□ -0.33
TP53-220ENST00000610623 USP11P51784 963 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 NCALDP61601 193 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 DYNLL1P63167 89 aaKnown RBP12.97□□□□□ -0.33
TP53-220ENST00000610623 LMNB2Q03252 620 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 CCDC178Q5BJE1 867 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 SFMBT2Q5VUG0 894 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 CROCCP2Q86T23 111 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 ENAHQ8N8S7 591 aaPredicted RBP12.97□□□□□ -0.33
TP53-220ENST00000610623 ZSCAN10Q96SZ4 725 aaPredicted RBP12.97□□□□□ -0.33
TP53-220ENST00000610623 TRIM9Q9C026 710 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 ATP8A2Q9NTI2 1148 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 TFCP2L1Q9NZI6 479 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 CEP72Q9P209 647 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 AGAP1Q9UPQ3 857 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 LAD1O00515 517 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 FLOT1O75955 427 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 DDAH1O94760 285 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 KIF4AO95239 1232 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 NUDT17P0C025 328 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 SCG2P13521 617 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 ATP4AP20648 1035 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 KIF5BP33176 963 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 KCNJ2P63252 427 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 AMPD3Q01432 767 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 ROR2Q01974 943 aaKnown RBP12.97□□□□□ -0.33
TP53-220ENST00000610623 TROAPQ12815 778 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 GALNTL6Q49A17 601 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 IFIT1BQ5T764 474 aaKnown RBP12.97□□□□□ -0.33
TP53-220ENST00000610623 TMEM92Q6UXU6 159 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 TMC4Q7Z404 712 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 LRRC34Q8IZ02 419 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms