RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SMAD2Q15796 467 aaKnown RBP16.89■□□□□ 0.29
CTSA-216ENST00000607212 SWSAP1Q6NVH7 229 aa16.89■□□□□ 0.29
CTSA-216ENST00000607212 SPPL3Q8TCT6 385 aa16.89■□□□□ 0.29
CTSA-216ENST00000607212 ATP8B4Q8TF62 1192 aa16.89■□□□□ 0.29
CTSA-216ENST00000607212 ZNF577Q9BSK1 485 aa16.89■□□□□ 0.29
CTSA-216ENST00000607212 SAMM50Q9Y512 469 aa16.89■□□□□ 0.29
CTSA-216ENST00000607212 MEIS1O00470 390 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 CCNE2O96020 404 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 HOXD11P31277 338 aaPredicted RBP16.88■□□□□ 0.29
CTSA-216ENST00000607212 IRS1P35568 1242 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.29
CTSA-216ENST00000607212 AKAP17AQ02040 695 aaKnown RBP16.88■□□□□ 0.29
CTSA-216ENST00000607212 CTC1Q2NKJ3 1217 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 ZNF484Q5JVG2 852 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 ADGRD2Q7Z7M1 963 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 CCDC60Q8IWA6 550 aaPredicted RBP16.88■□□□□ 0.29
CTSA-216ENST00000607212 THNSL1Q8IYQ7 743 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 CCDC12Q8WUD4 166 aaPredicted RBP16.88■□□□□ 0.29
CTSA-216ENST00000607212 ADAM2Q99965 735 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 TMX1Q9H3N1 280 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 C1orf112Q9NSG2 853 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 MUTYHQ9UIF7 546 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 NOC2LQ9Y3T9 749 aaKnown RBP16.88■□□□□ 0.29
CTSA-216ENST00000607212 KDM3AQ9Y4C1 1321 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 PLXNA4Q9HCM2 1894 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 COL1A2P08123 1366 aa16.88■□□□□ 0.29
CTSA-216ENST00000607212 CCDC196A0A1B0GTZ2 297 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 IPO5O00410 1097 aaKnown RBP16.87■□□□□ 0.29
CTSA-216ENST00000607212 GPR182O15218 404 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 DNAJB1P25685 340 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 CDC27P30260 824 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 ADAM15Q13444 863 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 ADCK5Q3MIX3 580 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 ABHD15Q6UXT9 468 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 NIPA1Q7RTP0 329 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 SKAP1Q86WV1 359 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 TEX2Q8IWB9 1127 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 OSMRQ99650 979 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 TLE6Q9H808 572 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 ATP6V0A4Q9HBG4 840 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 C6orf50Q9HD87 102 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 ERVK-5Q9HDB9 667 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 ST3GAL5Q9UNP4 418 aa16.87■□□□□ 0.29
CTSA-216ENST00000607212 FNDC1Q4ZHG4 1894 aaPredicted RBP16.86■□□□□ 0.29
CTSA-216ENST00000607212 C19orf67A6NJJ6 358 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 FAM86B1E9PN63 330 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 ATG7O95352 703 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 PSAPP07602 524 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 HMGB1P09429 215 aaKnown RBP16.86■□□□□ 0.29
CTSA-216ENST00000607212 FAM86B2P0C5J1 330 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 SETQ01105 290 aaPredicted RBP16.86■□□□□ 0.29
CTSA-216ENST00000607212 EXOSC10Q01780 885 aaKnown RBP16.86■□□□□ 0.29
CTSA-216ENST00000607212 APOBRQ0VD83 1088 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 KIZQ2M2Z5 673 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 BMP2KLQ5H9B9 411 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 ALYREFQ86V81 257 aaKnown RBP16.86■□□□□ 0.29
CTSA-216ENST00000607212 KIAA0319LQ8IZA0 1049 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 EFHBQ8N7U6 833 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 SCLT1Q96NL6 688 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 CDHR5Q9HBB8 845 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 BARX2Q9UMQ3 279 aaPredicted RBP16.86■□□□□ 0.29
CTSA-216ENST00000607212 AKT3Q9Y243 479 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 PCDHGC5Q9Y5F6 944 aa16.86■□□□□ 0.29
CTSA-216ENST00000607212 PER2O15055 1255 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 MGEA5O60502 916 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 CDC45O75419 566 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 VTNP04004 478 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 ADD1P35611 737 aaKnown RBP16.85■□□□□ 0.29
CTSA-216ENST00000607212 CLK2P49760 499 aaKnown RBP16.85■□□□□ 0.29
CTSA-216ENST00000607212 FUT2Q10981 343 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 CAMK1Q14012 370 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 PFKFB3Q16875 520 aaPredicted RBP16.85■□□□□ 0.29
CTSA-216ENST00000607212 PRR16Q569H4 304 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 FAM102BQ5T8I3 360 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 SLC24A5Q71RS6 500 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 RNF135Q8IUD6 432 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 RASEFQ8IZ41 740 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 REXO1Q8N1G1 1221 aaKnown RBP16.85■□□□□ 0.29
CTSA-216ENST00000607212 BBXQ8WY36 941 aaPredicted RBP16.85■□□□□ 0.29
CTSA-216ENST00000607212 MAP7D2Q96T17 732 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 TLR9Q9NR96 1032 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 RGS18Q9NS28 235 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 TBC1D22BQ9NU19 505 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 GABBR1Q9UBS5 961 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 CEP131Q9UPN4 1083 aa16.85■□□□□ 0.29
CTSA-216ENST00000607212 IGKV6D-21A0A0A0MT36 114 aa16.84■□□□□ 0.29
CTSA-216ENST00000607212 SRGAP2BP0DMP2 458 aa16.84■□□□□ 0.29
CTSA-216ENST00000607212 CPA1P15085 419 aa16.84■□□□□ 0.29
CTSA-216ENST00000607212 GNA11P29992 359 aa16.84■□□□□ 0.29
CTSA-216ENST00000607212 CA8P35219 290 aa16.84■□□□□ 0.29
CTSA-216ENST00000607212 CRYBB1P53674 252 aaPredicted RBP16.84■□□□□ 0.29
CTSA-216ENST00000607212 MCTP2Q6DN12 878 aa16.84■□□□□ 0.29
CTSA-216ENST00000607212 Q6ZUG5 572 aa16.84■□□□□ 0.29
CTSA-216ENST00000607212 ABI1Q8IZP0 508 aa16.84■□□□□ 0.29
CTSA-216ENST00000607212 RNF169Q8NCN4 708 aa16.84■□□□□ 0.29
CTSA-216ENST00000607212 TMEM40Q8WWA1 233 aa16.84■□□□□ 0.29
CTSA-216ENST00000607212 MFSD14AQ96MC6 490 aa16.84■□□□□ 0.29
CTSA-216ENST00000607212 JAKMIP1Q96N16 626 aaKnown RBP16.84■□□□□ 0.29
CTSA-216ENST00000607212 FGF18O76093 207 aa16.83■□□□□ 0.28
CTSA-216ENST00000607212 FGFR1P11362 822 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms