RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 KIAA0753Q2KHM9 967 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 LACTB2Q53H82 288 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 HSP90AB4PQ58FF6 505 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 RASIP1Q5U651 963 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 FBXW10Q5XX13 1052 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 CPLX2Q6PUV4 134 aaKnown RBP4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCNI2Q6ZMN8 369 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 SV2BQ7L1I2 683 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 RASGRP2Q7LDG7 609 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 ZNF605Q86T29 641 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 CTAGE6Q86UF2 777 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 AMIGO3Q86WK7 504 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 UNC5CLQ8IV45 518 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 CTAGE4Q8IX94 777 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 DRAXINQ8NBI3 349 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 FAM76AQ8TAV0 307 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 DHX38Q92620 1227 aaKnown RBP4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 DHX58Q96C10 678 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 SAAL1Q96ER3 474 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC51Q96ER9 411 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 PNKPQ96T60 521 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 CAPS2Q9BXY5 557 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 EPC1Q9H2F5 836 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 ZCCHC4Q9H5U6 513 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 BICC1Q9H694 974 aaKnown RBP4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 C12orf49Q9H741 205 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 VCPKMTQ9H867 229 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 KCNH3Q9ULD8 1083 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 HPCAL4Q9UM19 191 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 CAPN7Q9Y6W3 813 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 CLTCQ00610 1675 aaKnown RBP4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 LMTK2Q8IWU2 1503 aa4.56□□□□□ -1.68
HMGB1P50-201ENST00000605814 JCADQ9P266 1359 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 WDR17Q8IZU2 1322 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 ERICH2A1L162 156 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 CTAGE9A4FU28 777 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 AGPSO00116 658 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 MPHOSPH10O00566 681 aaKnown RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 AHCYL1O43865 530 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 KIF5CO60282 957 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 MGRN1O60291 552 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 WDHD1O75717 1129 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 GLRX3O76003 335 aaKnown RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 KIAA0754O94854 1291 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 YEATS4O95619 227 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 HPXP02790 462 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 KRT1P04264 644 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 FESP07332 822 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC175P0C221 793 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 GHRP10912 638 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 TOP1P11387 765 aaKnown RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 RPS6KB1P23443 525 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 CMA1P23946 247 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 TRHRP34981 398 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 MAGEA8P43361 318 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCT5P48643 541 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 VSNL1P62760 191 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 EGR3Q06889 387 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 XRCC4Q13426 336 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 STIM1Q13586 685 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC85BQ15834 202 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC40Q4G0X9 1142 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 NAIF1Q69YI7 327 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 WWC2Q6AWC2 1192 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 PPP4R3AQ6IN85 833 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 TTLL7Q6ZT98 887 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 NOL8Q76FK4 1167 aaKnown RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 CD302Q8IX05 232 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC170Q8IYT3 715 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 LILRA2Q8N149 483 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 FBXL16Q8N461 479 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 IGSF22Q8N9C0 903 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 TC2NQ8N9U0 490 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC148Q8NFR7 591 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 OR8K1Q8NGG5 319 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCHCR1Q8TD31 782 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 BCAS4Q8TDM0 211 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 ZFAND2BQ8WV99 257 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 MRPS27Q92552 414 aaKnown RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 N4BP2L2Q92802 583 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 SMARCC1Q92922 1105 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 PHACTR3Q96KR7 559 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 JAKMIP1Q96N16 626 aaKnown RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 CLIC6Q96NY7 704 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 OSBPL9Q96SU4 736 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 OSBPL7Q9BZF2 842 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 RNF32Q9H0A6 362 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 IL25Q9H293 177 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 ADAMTS10Q9H324 1103 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 KAT14Q9H8E8 782 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 DDX20Q9UHI6 824 aaKnown RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 CNOT6Q9ULM6 557 aaKnown RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 MYO6Q9UM54 1294 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC9Q9Y3X0 531 aaKnown RBP4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 NEXMIFQ5QGS0 1516 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 ARAP3Q8WWN8 1544 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 TULP4Q9NRJ4 1543 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 KIF20BQ96Q89 1820 aa4.55□□□□□ -1.68
HMGB1P50-201ENST00000605814 ARHGEF28Q8N1W1 1705 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms