RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 KDM3AQ9Y4C1 1321 aa13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 MEIS2O14770 477 aa13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 PDE4AP27815 886 aa13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 MTMR1Q13613 665 aa13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 TPRNQ4KMQ1 711 aa13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 CES5AQ6NT32 575 aa13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 FLCNQ8NFG4 579 aa13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 CASP10Q92851 521 aa13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ADAM2Q99965 735 aa13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 SENP2Q9HC62 589 aa13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ERVK-5Q9HDB9 667 aa13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 JPH1Q9HDC5 661 aaPredicted RBP13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 NGRNQ9NPE2 291 aaKnown RBP13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 C1orf112Q9NSG2 853 aa13.51□□□□□ -0.25
PDLIM1P1-201ENST00000604187 PLXNA3P51805 1871 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 PIK3CDO00329 1044 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 RPS6KA5O75582 802 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 WEE2P0C1S8 567 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 PBX3P40426 434 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 CLCN5P51795 746 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 PLCB3Q01970 1234 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 PLCB4Q15147 1175 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 SLC24A5Q71RS6 500 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 TDRD5Q8NAT2 981 aaKnown RBP13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 TMEM40Q8WWA1 233 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 LNPKQ9C0E8 428 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ADAM7Q9H2U9 754 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 CWH43Q9H720 699 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ATP6V0A4Q9HBG4 840 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 RGS18Q9NS28 235 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 NOC2LQ9Y3T9 749 aaKnown RBP13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 HCFC2Q9Y5Z7 792 aa13.5□□□□□ -0.25
PDLIM1P1-201ENST00000604187 DMXL1Q9Y485 3027 aa13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 SMIM35A0A1B0GVV1 85 aa13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 MED19A0JLT2 244 aaPredicted RBP13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 C9IYK1 514 aa13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 IFIT3O14879 490 aaKnown RBP13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ITIH3Q06033 890 aa13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 TROAPQ12815 778 aa13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 CWF19L1Q69YN2 538 aaKnown RBP13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 MTHFD1LQ6UB35 978 aa13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 TMC7Q7Z402 723 aa13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 NME8Q8N427 588 aa13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 TNPO1Q92973 898 aaKnown RBP13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 CDHR5Q9HBB8 845 aa13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 LIMD1Q9UGP4 676 aa13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ST3GAL5Q9UNP4 418 aa13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 UBIAD1Q9Y5Z9 338 aa13.49□□□□□ -0.25
PDLIM1P1-201ENST00000604187 DNAH14Q0VDD8 3507 aa13.48□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ERICH2A1L162 156 aa13.48□□□□□ -0.25
PDLIM1P1-201ENST00000604187 PPM1AP35813 382 aa13.48□□□□□ -0.25
PDLIM1P1-201ENST00000604187 MTHFRP42898 656 aa13.48□□□□□ -0.25
PDLIM1P1-201ENST00000604187 KRT17Q04695 432 aa13.48□□□□□ -0.25
PDLIM1P1-201ENST00000604187 TRDNQ13061 729 aa13.48□□□□□ -0.25
PDLIM1P1-201ENST00000604187 KCNT2Q6UVM3 1135 aa13.48□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ZDHHC14Q8IZN3 488 aa13.48□□□□□ -0.25
PDLIM1P1-201ENST00000604187 RMDN1Q96DB5 314 aa13.48□□□□□ -0.25
PDLIM1P1-201ENST00000604187 RRP36Q96EU6 259 aaKnown RBP13.48□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ZNF558Q96NG5 402 aa13.48□□□□□ -0.25
PDLIM1P1-201ENST00000604187 TMEM161AQ9NX61 479 aa13.48□□□□□ -0.25
PDLIM1P1-201ENST00000604187 SLC9A2Q9UBY0 812 aa13.48□□□□□ -0.25
PDLIM1P1-201ENST00000604187 CEP250Q9BV73 2442 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 C2orf71A6NGG8 1288 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 GPR182O15218 404 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ARP10275 920 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 AOC1P19801 751 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 CA8P35219 290 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 STAT5BP51692 787 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ACTR2P61160 394 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 SMC1AQ14683 1233 aaKnown RBP13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 WTAPQ15007 396 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ANGPT1Q15389 498 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 UBE2SQ16763 222 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 RARS2Q5T160 578 aaKnown RBP13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 LRRC55Q6ZSA7 311 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 FAM43BQ6ZT52 329 aaPredicted RBP13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 PLPPR4Q7Z2D5 763 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 CATIPQ7Z7H3 387 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 CCDC105Q8IYK2 499 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 LRRC43Q8N309 656 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 C12orf76Q8N812 135 aaPredicted RBP13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 MRPL43Q8N983 215 aaKnown RBP13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 KCNG4Q8TDN1 519 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 PPP1R16BQ96T49 567 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 TMEM117Q9H0C3 514 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 JADE2Q9NQC1 790 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 SEC63Q9UGP8 760 aaKnown RBP13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 CACNA1BQ00975 2339 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 FRYLO94915 3013 aa13.47□□□□□ -0.25
PDLIM1P1-201ENST00000604187 HIP1O00291 1037 aa13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 PI15O43692 258 aa13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 CLASP2O75122 1294 aaKnown RBP13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 KLRC1P26715 233 aa13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 HDAC1Q13547 482 aaPredicted RBP13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 SART3Q15020 963 aaKnown RBP13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 KIZQ2M2Z5 673 aa13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 ODR4Q5SWX8 454 aa13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 DGLUCYQ7Z3D6 616 aa13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 KIAA0319LQ8IZA0 1049 aa13.46□□□□□ -0.25
PDLIM1P1-201ENST00000604187 CASD1Q96PB1 797 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms