RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 FTOQ9C0B1 505 aaKnown RBP eCLIP17.93■□□□□ 0.46
PPFIA3-213ENST00000602905 MTIF3Q9H2K0 278 aaKnown RBP17.93■□□□□ 0.46
PPFIA3-213ENST00000602905 TUFT1Q9NNX1 390 aa17.93■□□□□ 0.46
PPFIA3-213ENST00000602905 LRWD1Q9UFC0 647 aa17.93■□□□□ 0.46
PPFIA3-213ENST00000602905 PPME1Q9Y570 386 aa17.93■□□□□ 0.46
PPFIA3-213ENST00000602905 SLITRK3O94933 977 aa17.92■□□□□ 0.46
PPFIA3-213ENST00000602905 ACTN1P12814 892 aa17.92■□□□□ 0.46
PPFIA3-213ENST00000602905 YWHABP31946 246 aaKnown RBP17.92■□□□□ 0.46
PPFIA3-213ENST00000602905 SF3A1Q15459 793 aaKnown RBP17.92■□□□□ 0.46
PPFIA3-213ENST00000602905 DEFB128Q7Z7B8 93 aa17.92■□□□□ 0.46
PPFIA3-213ENST00000602905 TDHQ8IZJ6 230 aa17.92■□□□□ 0.46
PPFIA3-213ENST00000602905 ZNF396Q96N95 335 aaPredicted RBP17.92■□□□□ 0.46
PPFIA3-213ENST00000602905 DAXXQ9UER7 740 aaPredicted RBP17.92■□□□□ 0.46
PPFIA3-213ENST00000602905 LOXHD1Q8IVV2 1947 aa17.92■□□□□ 0.46
PPFIA3-213ENST00000602905 ZBTB42B2RXF5 422 aa17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 C22orf31O95567 290 aa17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 FGBP02675 491 aa17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 CTSHP09668 335 aa17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 ZSCAN22P10073 491 aaPredicted RBP17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 ACRP10323 421 aa17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 FOXD4L5Q5VV16 416 aaPredicted RBP17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 KRT79Q5XKE5 535 aa17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 EFCAB12Q6NXP0 572 aa17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 FOXD4L4Q8WXT5 416 aaPredicted RBP17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 CEP170P1Q96L14 293 aa17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 MAP7D2Q96T17 732 aa17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 HSD17B14Q9BPX1 270 aa17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 POLR3CQ9BUI4 534 aaPredicted RBP17.91■□□□□ 0.46
PPFIA3-213ENST00000602905 VWA3AA6NCI4 1184 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 LYPLA2O95372 231 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 MUTP22033 750 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 RPA1P27694 616 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 CCT6AP40227 531 aaKnown RBP17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 DNM2P50570 870 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 MRPS6P82932 125 aaKnown RBP17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 TARBP2Q15633 366 aaKnown RBP17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 XKR9Q5GH70 373 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 FAM26DQ5JW98 314 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 PLA2G4FQ68DD2 849 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 ANO5Q75V66 913 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 ZNF710Q8N1W2 664 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 IGSF22Q8N9C0 903 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 ZBTB10Q96DT7 871 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 PRO3102Q9H379 93 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 SUGCTQ9HAC7 445 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 CYP26B1Q9NR63 512 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 ANKEF1Q9NU02 776 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 ARID2Q68CP9 1835 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 TET1Q8NFU7 2136 aa17.9■□□□□ 0.46
PPFIA3-213ENST00000602905 STBD1O95210 358 aa17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 F13A1P00488 732 aa17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 XRCC6P12956 609 aaKnown RBP eCLIP17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 RFC5P40937 340 aa17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 POLGP54098 1239 aaPredicted RBP17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 FAM173BQ6P4H8 233 aa17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 ZNF365Q70YC5 407 aa17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 CATSPER3Q86XQ3 398 aa17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 SNX29Q8TEQ0 813 aa17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 SLC7A3Q8WY07 619 aa17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 RNPC3Q96LT9 517 aaKnown RBP17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 NACC1Q96RE7 527 aa17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 WRAP73Q9P2S5 460 aaPredicted RBP17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 AKT3Q9Y243 479 aa17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 TRPV2Q9Y5S1 764 aa17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 CLIC4Q9Y696 253 aa17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 CDY2AQ9Y6F7 541 aa17.89■□□□□ 0.45
PPFIA3-213ENST00000602905 TMEM150BA6NC51 233 aa17.88■□□□□ 0.45
PPFIA3-213ENST00000602905 MED24O75448 989 aa17.88■□□□□ 0.45
PPFIA3-213ENST00000602905 ANP32AP39687 249 aaKnown RBP17.88■□□□□ 0.45
PPFIA3-213ENST00000602905 EPHB4P54760 987 aa17.88■□□□□ 0.45
PPFIA3-213ENST00000602905 CEBPZQ03701 1054 aaKnown RBP17.88■□□□□ 0.45
PPFIA3-213ENST00000602905 SHHQ15465 462 aa17.88■□□□□ 0.45
PPFIA3-213ENST00000602905 TMEM240Q5SV17 173 aa17.88■□□□□ 0.45
PPFIA3-213ENST00000602905 KIAA0319LQ8IZA0 1049 aa17.88■□□□□ 0.45
PPFIA3-213ENST00000602905 AK8Q96MA6 479 aa17.88■□□□□ 0.45
PPFIA3-213ENST00000602905 SH2D3AQ9BRG2 576 aa17.88■□□□□ 0.45
PPFIA3-213ENST00000602905 TRIOBPQ9H2D6 2365 aa17.88■□□□□ 0.45
PPFIA3-213ENST00000602905 GAS2O43903 313 aaKnown RBP17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 NBNO60934 754 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 MAFO75444 373 aaPredicted RBP17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 CHRNA1P02708 482 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 CXCL10P02778 98 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 SPATA31C1P0DKV0 1188 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 CLCN3P51790 818 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 NPEPPSP55786 919 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 CDC42EP1Q00587 391 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 TMEM62Q0P6H9 643 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 STK38Q15208 465 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 IL17AQ16552 155 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 CNKSR3Q6P9H4 555 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 TRAF7Q6Q0C0 670 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 LRRC71Q8N4P6 559 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 SEPT8Q92599 483 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 CDK5RAP3Q96JB5 506 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 SCLT1Q96NL6 688 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 USP28Q96RU2 1077 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 CELF4Q9BZC1 486 aaKnown RBP17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 KDM3AQ9Y4C1 1321 aa17.87■□□□□ 0.45
PPFIA3-213ENST00000602905 ZBBXA8MT70 800 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms