RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	CELF4	Q9BZC1	486 aa	Known RBP	14.01	□□□□□ -0.17
STRN4-223	ENST00000602223	AGO3	Q9H9G7	860 aa	Known RBP	14.01	□□□□□ -0.17
STRN4-223	ENST00000602223	DDX25	Q9UHL0	483 aa	Known RBP	14.01	□□□□□ -0.17
STRN4-223	ENST00000602223	CEP131	Q9UPN4	1083 aa		14.01	□□□□□ -0.17
STRN4-223	ENST00000602223	KIAA1671	Q9BY89	1806 aa		14.01	□□□□□ -0.17
STRN4-223	ENST00000602223	REV3L	O60673	3130 aa		14	□□□□□ -0.17
STRN4-223	ENST00000602223	ATG2A	Q2TAZ0	1938 aa		14	□□□□□ -0.17
STRN4-223	ENST00000602223	LINC01553	A4QN01	128 aa		14	□□□□□ -0.17
STRN4-223	ENST00000602223	CHMP2A	O43633	222 aa		14	□□□□□ -0.17
STRN4-223	ENST00000602223	SLC37A4	O43826	429 aa		14	□□□□□ -0.17
STRN4-223	ENST00000602223	ZNF862	O60290	1169 aa		14	□□□□□ -0.17
STRN4-223	ENST00000602223	C22orf31	O95567	290 aa		14	□□□□□ -0.17
STRN4-223	ENST00000602223	ERVK-21	P61565	698 aa		14	□□□□□ -0.17
STRN4-223	ENST00000602223	UGCG	Q16739	394 aa		14	□□□□□ -0.17
STRN4-223	ENST00000602223	LETM2	Q2VYF4	491 aa		14	□□□□□ -0.17
STRN4-223	ENST00000602223	NEK8	Q86SG6	692 aa		14	□□□□□ -0.17
STRN4-223	ENST00000602223	KIAA0319L	Q8IZA0	1049 aa		14	□□□□□ -0.17
STRN4-223	ENST00000602223	VCAN	P13611	3396 aa		14	□□□□□ -0.17
STRN4-223	ENST00000602223	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	ARID2	Q68CP9	1835 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	ENPP3	O14638	875 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	JAK2	O60674	1132 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	UPP2	O95045	317 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	OAT	P04181	439 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	GCFC2	P16383	781 aa	Known RBP	13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	CD52	P31358	61 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	KRT2	P35908	639 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	PRKCE	Q02156	737 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	EARS2	Q5JPH6	523 aa	Known RBP	13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	PPP4R3A	Q6IN85	833 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	PIK3AP1	Q6ZUJ8	805 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	MIER3	Q7Z3K6	550 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	PPM1E	Q8WY54	764 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	TNFRSF25	Q93038	417 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	TGS1	Q96RS0	853 aa	Known RBP	13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	KIF2C	Q99661	725 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	KCNMB3	Q9NPA1	279 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	MTCH2	Q9Y6C9	303 aa		13.99	□□□□□ -0.17
STRN4-223	ENST00000602223	BRWD1	Q9NSI6	2320 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	MAGEB2	O15479	319 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	GTPBP6	O43824	516 aa	Predicted RBP	13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	LPXN	O60711	386 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	NR5A1	Q13285	461 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	GRB10	Q13322	594 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	LINC01465	Q8N7H1	131 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	LINC01599	Q8WXQ3	324 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	FAM20A	Q96MK3	541 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	YME1L1	Q96TA2	773 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	NAP1L4	Q99733	375 aa	Known RBP	13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	FTHL17	Q9BXU8	183 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	BRMS1	Q9HCU9	246 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	NRBP2	Q9NSY0	501 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	PADI3	Q9ULW8	664 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	LIMCH1	Q9UPQ0	1083 aa		13.98	□□□□□ -0.17
STRN4-223	ENST00000602223	MYO7A	Q13402	2215 aa		13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	FAM205C	A6NFA0	338 aa		13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	TBX3	O15119	743 aa		13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	CCNT1	O60563	726 aa	Known RBP	13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	MMP1	P03956	469 aa		13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	PAK2	Q13177	524 aa		13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	PPP2R5C	Q13362	524 aa		13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	CCDC85B	Q15834	202 aa	Predicted RBP	13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	TMEM40	Q8WWA1	233 aa		13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	SUGCT	Q9HAC7	445 aa		13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	CDHR5	Q9HBB8	845 aa		13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	RC3H2	Q9HBD1	1191 aa	Known RBP	13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	PRDM6	Q9NQX0	595 aa		13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	VAV3	Q9UKW4	847 aa		13.97	□□□□□ -0.17
STRN4-223	ENST00000602223	DLL1	O00548	723 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	STBD1	O95210	358 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	VTN	P04004	478 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	RBM25	P49756	843 aa	Known RBP	13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	CLCN3	P51790	818 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	TARBP2	Q15633	366 aa	Known RBP	13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	KRT40	Q6A162	431 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	EFCAB12	Q6NXP0	572 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	CCDC83	Q8IWF9	413 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	MICALL1	Q8N3F8	863 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	METTL13	Q8N6R0	699 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	GDPD5	Q8WTR4	605 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	HAS1	Q92839	578 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	SAMD11	Q96NU1	681 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	C17orf80	Q9BSJ5	609 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	NIFK	Q9BYG3	293 aa	Known RBP	13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	TMX1	Q9H3N1	280 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	ERVK-5	Q9HDB9	667 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	LMCD1	Q9NZU5	365 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	MTUS1	Q9ULD2	1270 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	GINS2	Q9Y248	185 aa		13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	NOC2L	Q9Y3T9	749 aa	Known RBP	13.96	□□□□□ -0.17
STRN4-223	ENST00000602223	TCF20	Q9UGU0	1960 aa	Known RBP	13.96	□□□□□ -0.18
STRN4-223	ENST00000602223	CUL9	Q8IWT3	2517 aa		13.95	□□□□□ -0.18
STRN4-223	ENST00000602223	BTBD18	B2RXH4	712 aa		13.95	□□□□□ -0.18
STRN4-223	ENST00000602223	EML1	O00423	815 aa		13.95	□□□□□ -0.18
STRN4-223	ENST00000602223	GPR32	O75388	356 aa		13.95	□□□□□ -0.18
STRN4-223	ENST00000602223	RPS6KA5	O75582	802 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms