RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 SNX21Q969T3 373 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 DYDC2Q96IM9 177 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 MTMR9Q96QG7 549 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 PPP1R16BQ96T49 567 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 SH2D3AQ9BRG2 576 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 LXNQ9BS40 222 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 RGL1Q9NZL6 768 aa14.37□□□□□ -0.11
USE1-209ENST00000601592 LAMA2P24043 3122 aaKnown RBP14.36□□□□□ -0.11
USE1-209ENST00000601592 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.36□□□□□ -0.11
USE1-209ENST00000601592 SMIM35A0A1B0GVV1 85 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.36□□□□□ -0.11
USE1-209ENST00000601592 GRXCR1A8MXD5 290 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 CHRNA1P02708 482 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 CXCL10P02778 98 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 RPLP2P05387 115 aaKnown RBP14.36□□□□□ -0.11
USE1-209ENST00000601592 GHRP10912 638 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 TECP42680 631 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 SPIRE1Q08AE8 756 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 CTTNQ14247 550 aaKnown RBP14.36□□□□□ -0.11
USE1-209ENST00000601592 TMEM266Q2M3C6 531 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 FAM109BQ6ICB4 259 aaPredicted RBP14.36□□□□□ -0.11
USE1-209ENST00000601592 FERMT3Q86UX7 667 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 TPH2Q8IWU9 490 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 LRRC71Q8N4P6 559 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 SUGCTQ9HAC7 445 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 AKT3Q9Y243 479 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 PCDHB6Q9Y5E3 794 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 TRPV2Q9Y5S1 764 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 MYH15Q9Y2K3 1946 aa14.36□□□□□ -0.11
USE1-209ENST00000601592 MAGEB2O15479 319 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 BAIAP3O94812 1187 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 VTNP04004 478 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 ATP2A2P16615 1042 aaKnown RBP14.35□□□□□ -0.11
USE1-209ENST00000601592 TOB1P50616 345 aaPredicted RBP14.35□□□□□ -0.11
USE1-209ENST00000601592 SMAD3P84022 425 aaKnown RBP14.35□□□□□ -0.11
USE1-209ENST00000601592 MGAT3Q09327 533 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 PTGDRQ13258 359 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 IKBKEQ14164 716 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 FAM26DQ5JW98 314 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 RASIP1Q5U651 963 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 EFCAB12Q6NXP0 572 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 RPAINQ86UA6 219 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 DBF4BQ8NFT6 615 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 SEPT8Q92599 483 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 INTS4Q96HW7 963 aaKnown RBP14.35□□□□□ -0.11
USE1-209ENST00000601592 CCDC43Q96MW1 224 aaKnown RBP14.35□□□□□ -0.11
USE1-209ENST00000601592 MAP7D2Q96T17 732 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 EIF2AK1Q9BQI3 630 aaKnown RBP14.35□□□□□ -0.11
USE1-209ENST00000601592 IFIH1Q9BYX4 1025 aaKnown RBP14.35□□□□□ -0.11
USE1-209ENST00000601592 OSBPL7Q9BZF2 842 aa14.35□□□□□ -0.11
USE1-209ENST00000601592 WRAP73Q9P2S5 460 aaPredicted RBP14.35□□□□□ -0.11
USE1-209ENST00000601592 MYO9BQ13459 2157 aa14.34□□□□□ -0.11
USE1-209ENST00000601592 TMOD1P28289 359 aa14.34□□□□□ -0.11
USE1-209ENST00000601592 LPIN1Q14693 890 aa14.34□□□□□ -0.11
USE1-209ENST00000601592 TCTN1Q2MV58 587 aa14.34□□□□□ -0.11
USE1-209ENST00000601592 PLEKHG4Q58EX7 1191 aa14.34□□□□□ -0.11
USE1-209ENST00000601592 RILPL1Q5EBL4 403 aa14.34□□□□□ -0.11
USE1-209ENST00000601592 KIAA0319LQ8IZA0 1049 aa14.34□□□□□ -0.11
USE1-209ENST00000601592 NME8Q8N427 588 aa14.34□□□□□ -0.11
USE1-209ENST00000601592 NEK9Q8TD19 979 aa14.34□□□□□ -0.11
USE1-209ENST00000601592 CEP170P1Q96L14 293 aa14.34□□□□□ -0.11
USE1-209ENST00000601592 SCLT1Q96NL6 688 aa14.34□□□□□ -0.11
USE1-209ENST00000601592 SLC9A7Q96T83 725 aa14.34□□□□□ -0.11
USE1-209ENST00000601592 NIFKQ9BYG3 293 aaKnown RBP14.34□□□□□ -0.11
USE1-209ENST00000601592 CELF4Q9BZC1 486 aaKnown RBP14.34□□□□□ -0.11
USE1-209ENST00000601592 ZSWIM4Q9H7M6 989 aa14.34□□□□□ -0.11
USE1-209ENST00000601592 BMP2KQ9NSY1 1161 aaPredicted RBP14.34□□□□□ -0.11
USE1-209ENST00000601592 ABHD14A-ACY1A0A1B0GW23 586 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 STBD1O95210 358 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 DNAJB2P25686 324 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 YWHABP31946 246 aaKnown RBP14.33□□□□□ -0.12
USE1-209ENST00000601592 PBX2P40425 430 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 RABGGTBP53611 331 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 NPEPPSP55786 919 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 WDR5P61964 334 aaKnown RBP14.33□□□□□ -0.12
USE1-209ENST00000601592 KIZQ2M2Z5 673 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 XKR9Q5GH70 373 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 FBXO47Q5MNV8 452 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 ZNF697Q5TEC3 545 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 ANO5Q75V66 913 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 Q7L0L9 218 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 OTUD6AQ7L8S5 288 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 C4orf19Q8IY42 314 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 SPRYD3Q8NCJ5 442 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 ERMNQ8TAM6 284 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 ZNF668Q96K58 619 aaPredicted RBP14.33□□□□□ -0.12
USE1-209ENST00000601592 FAM161BQ96MY7 647 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 CYP26B1Q9NR63 512 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 MSRAQ9UJ68 235 aa14.33□□□□□ -0.12
USE1-209ENST00000601592 EFCAB14O75071 495 aa14.32□□□□□ -0.12
USE1-209ENST00000601592 SLITRK3O94933 977 aa14.32□□□□□ -0.12
USE1-209ENST00000601592 SYT1P21579 422 aa14.32□□□□□ -0.12
USE1-209ENST00000601592 CD52P31358 61 aa14.32□□□□□ -0.12
USE1-209ENST00000601592 POLGP54098 1239 aaPredicted RBP14.32□□□□□ -0.12
USE1-209ENST00000601592 DEFB103AP81534 67 aa14.32□□□□□ -0.12
USE1-209ENST00000601592 PAK2Q13177 524 aa14.32□□□□□ -0.12
USE1-209ENST00000601592 TARBP2Q15633 366 aaKnown RBP14.32□□□□□ -0.12
USE1-209ENST00000601592 FAM117BQ6P1L5 589 aa14.32□□□□□ -0.12
USE1-209ENST00000601592 TSHZ1Q6ZSZ6 1077 aa14.32□□□□□ -0.12
USE1-209ENST00000601592 BRAPQ7Z569 592 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms