RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 CCT8L2Q96SF2 557 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 COQ7Q99807 217 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 PARVGQ9HBI0 331 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 NSMCE4AQ9NXX6 385 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 TGS1Q96RS0 853 aaKnown RBP13.06□□□□□ -0.32
SHANK2-218ENST00000601538 ZSCAN32Q9NX65 697 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 O00370 1275 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 HAUS5O94927 633 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 HSPA2P54652 639 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 COPS2P61201 443 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 TRIM71Q2Q1W2 868 aaKnown RBP13.06□□□□□ -0.32
SHANK2-218ENST00000601538 SH3GL1Q99961 368 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 AATFQ9NY61 560 aaKnown RBP eCLIP13.06□□□□□ -0.32
SHANK2-218ENST00000601538 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.06□□□□□ -0.32
SHANK2-218ENST00000601538 KDRP35968 1356 aa13.06□□□□□ -0.32
SHANK2-218ENST00000601538 K7ENM7 598 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 XPOTO43592 962 aaKnown RBP13.05□□□□□ -0.32
SHANK2-218ENST00000601538 OR52Z1P0C646 297 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 ARL4AP40617 200 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 COPS6Q7L5N1 327 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 TRIM69Q86WT6 500 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 NME9Q86XW9 330 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 C16orf71Q8IYS4 520 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-218ENST00000601538 EPS8L2Q9H6S3 715 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 ARHGEF37A1IGU5 675 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 LPXNO60711 386 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 TOMM70O94826 608 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 ARL4CP56559 192 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 HIC1Q14526 733 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 DNAJC9Q8WXX5 260 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 NT5C1BQ96P26 610 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 CORO1CQ9ULV4 474 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-218ENST00000601538 TRADDQ15628 312 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 NELFCDQ8IXH7 590 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 FLCNQ8NFG4 579 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 TNIP2Q8NFZ5 429 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 UNC45AQ9H3U1 944 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 MED23Q9ULK4 1368 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 RSPH10B2B2RC85 870 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 CBFA2T3O75081 653 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 RSPH10BP0C881 870 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 MYLK4Q86YV6 388 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-218ENST00000601538 USHBP1Q8N6Y0 703 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 ETNK1Q9HBU6 452 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 NCOA5Q9HCD5 579 aaKnown RBP13.05□□□□□ -0.32
SHANK2-218ENST00000601538 PA2G4Q9UQ80 394 aaKnown RBP13.05□□□□□ -0.32
SHANK2-218ENST00000601538 hCG_2014768A0A024R1R8 64 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 MAGEA13PA6NCF6 341 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 CTCFP49711 727 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-218ENST00000601538 TUBA3CQ13748 450 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 DNAL1Q4LDG9 190 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 DARS2Q6PI48 645 aaKnown RBP13.05□□□□□ -0.32
SHANK2-218ENST00000601538 PHACTR3Q96KR7 559 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 SERTAD1Q9UHV2 236 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 PTCH1Q13635 1447 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 MIF4GDA9UHW6 222 aaKnown RBP13.05□□□□□ -0.32
SHANK2-218ENST00000601538 RHOBTB1O94844 696 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 SCRN1Q12765 414 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 TPH2Q8IWU9 490 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 TESK2Q96S53 571 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 GOLPH3LQ9H4A5 285 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 CCDC134Q9H6E4 229 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 PRG3Q9Y2Y8 225 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-218ENST00000601538 ATP8B3O60423 1300 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 LSP1P33241 339 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 ZBED6P86452 979 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 FKBP3Q00688 224 aaKnown RBP13.05□□□□□ -0.32
SHANK2-218ENST00000601538 TPTE2Q6XPS3 522 aa13.05□□□□□ -0.32
SHANK2-218ENST00000601538 GPBP1L1Q9HC44 474 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-218ENST00000601538 DTNBO60941 627 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 NDUFA10O95299 355 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 KCNA3P22001 575 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 S100A1P23297 94 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 CDC27P30260 824 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 BYSLQ13895 437 aaKnown RBP13.04□□□□□ -0.32
SHANK2-218ENST00000601538 TRIM16LQ309B1 348 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 ANGPTL8Q6UXH0 198 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 ZCRB1Q8TBF4 217 aaKnown RBP13.04□□□□□ -0.32
SHANK2-218ENST00000601538 RAPGEF5Q92565 580 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 GCNT4Q9P109 453 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 AFPP02771 609 aaKnown RBP13.04□□□□□ -0.32
SHANK2-218ENST00000601538 PSMC2P35998 433 aaKnown RBP13.04□□□□□ -0.32
SHANK2-218ENST00000601538 C4orf50Q6ZRC1 276 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 ZBTB7BO15156 539 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-218ENST00000601538 MMP14P50281 582 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 TSC22D1Q15714 1073 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 SNX19Q92543 992 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 TADA1Q96BN2 335 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 CMTM5Q96DZ9 223 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 KLHL31Q9H511 634 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 CTNNAL1Q9UBT7 734 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 USP14P54578 494 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 ACTN3Q08043 901 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-218ENST00000601538 BLIDQ8IZY5 108 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 NHEJ1Q9H9Q4 299 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-218ENST00000601538 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 RPL26L1Q9UNX3 145 aaKnown RBP13.04□□□□□ -0.32
SHANK2-218ENST00000601538 RFX7Q2KHR2 1363 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 ACSL3O95573 720 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 DDR1Q08345 913 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms