RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 CDK5RAP3Q96JB5 506 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 CEP170P1Q96L14 293 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 AK8Q96MA6 479 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 WNT8AQ9H1J5 351 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 RGL1Q9NZL6 768 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 COLQQ9Y215 455 aaPredicted RBP14.55□□□□□ -0.08
SRRM1-223ENST00000600523 ATP6V1DQ9Y5K8 247 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 UMODL1Q5DID0 1318 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 SLITRK3O94933 977 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 FGBP02675 491 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 XRCC6P12956 609 aaKnown RBP eCLIP14.54□□□□□ -0.08
SRRM1-223ENST00000600523 RPA1P27694 616 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 CCT6AP40227 531 aaKnown RBP14.54□□□□□ -0.08
SRRM1-223ENST00000600523 RFC5P40937 340 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 POLGP54098 1239 aaPredicted RBP14.54□□□□□ -0.08
SRRM1-223ENST00000600523 SF3A1Q15459 793 aaKnown RBP14.54□□□□□ -0.08
SRRM1-223ENST00000600523 XKR9Q5GH70 373 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 ODR4Q5SWX8 454 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 EFCAB12Q6NXP0 572 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 C4orf32Q8N8J7 132 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 USP38Q8NB14 1042 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 RASSF8Q8NHQ8 419 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 SNX29Q8TEQ0 813 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 DHX38Q92620 1227 aaKnown RBP14.54□□□□□ -0.08
SRRM1-223ENST00000600523 SCLT1Q96NL6 688 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 NACC1Q96RE7 527 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 CTAGE1Q96RT6 745 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 HSD17B14Q9BPX1 270 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 POLR3CQ9BUI4 534 aaPredicted RBP14.54□□□□□ -0.08
SRRM1-223ENST00000600523 SUGCTQ9HAC7 445 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 CYP26B1Q9NR63 512 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 ANKEF1Q9NU02 776 aa14.54□□□□□ -0.08
SRRM1-223ENST00000600523 TNRC18O15417 2968 aaPredicted RBP14.53□□□□□ -0.08
SRRM1-223ENST00000600523 KDM3AQ9Y4C1 1321 aa14.53□□□□□ -0.08
SRRM1-223ENST00000600523 VWA3AA6NCI4 1184 aa14.53□□□□□ -0.08
SRRM1-223ENST00000600523 GAS2O43903 313 aaKnown RBP14.53□□□□□ -0.08
SRRM1-223ENST00000600523 EFCAB14O75071 495 aa14.53□□□□□ -0.08
SRRM1-223ENST00000600523 LYPLA2O95372 231 aa14.53□□□□□ -0.08
SRRM1-223ENST00000600523 C22orf31O95567 290 aa14.53□□□□□ -0.08
SRRM1-223ENST00000600523 ACRP10323 421 aa14.53□□□□□ -0.08
SRRM1-223ENST00000600523 MRPS6P82932 125 aaKnown RBP14.53□□□□□ -0.08
SRRM1-223ENST00000600523 TRIM71Q2Q1W2 868 aaKnown RBP14.53□□□□□ -0.08
SRRM1-223ENST00000600523 ATL3Q6DD88 541 aa14.53□□□□□ -0.08
SRRM1-223ENST00000600523 RUFY4Q6ZNE9 571 aa14.53□□□□□ -0.08
SRRM1-223ENST00000600523 IGSF22Q8N9C0 903 aa14.53□□□□□ -0.08
SRRM1-223ENST00000600523 SEPT8Q92599 483 aa14.53□□□□□ -0.08
SRRM1-223ENST00000600523 RNPC3Q96LT9 517 aaKnown RBP14.53□□□□□ -0.08
SRRM1-223ENST00000600523 AKT3Q9Y243 479 aa14.53□□□□□ -0.08
SRRM1-223ENST00000600523 LTBP2Q14767 1821 aa14.52□□□□□ -0.08
SRRM1-223ENST00000600523 F13A1P00488 732 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 TXLNAP40222 546 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 UBA7P41226 1012 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 CEBPZQ03701 1054 aaKnown RBP14.52□□□□□ -0.09
SRRM1-223ENST00000600523 STK38Q15208 465 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 FOXD4L5Q5VV16 416 aaPredicted RBP14.52□□□□□ -0.09
SRRM1-223ENST00000600523 FAM43BQ6ZT52 329 aaPredicted RBP14.52□□□□□ -0.09
SRRM1-223ENST00000600523 ZNF365Q70YC5 407 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 ANO5Q75V66 913 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 CATSPER3Q86XQ3 398 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 KCTD17Q8N5Z5 321 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 TCP11Q8WWU5 503 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 FOXD4L4Q8WXT5 416 aaPredicted RBP14.52□□□□□ -0.09
SRRM1-223ENST00000600523 CALML4Q96GE6 196 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 NT5C3AQ9H0P0 336 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 CFAP45Q9UL16 551 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 GINS2Q9Y248 185 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 TRPV2Q9Y5S1 764 aa14.52□□□□□ -0.09
SRRM1-223ENST00000600523 CEP290O15078 2479 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 ZBBXA8MT70 800 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 ZBTB42B2RXF5 422 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 SLC26A4O43511 780 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 MAFO75444 373 aaPredicted RBP14.51□□□□□ -0.09
SRRM1-223ENST00000600523 DGAT1O75907 488 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 BAIAP3O94812 1187 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 LONP1P36776 959 aaKnown RBP14.51□□□□□ -0.09
SRRM1-223ENST00000600523 KCNJ6P48051 423 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 TMEM62Q0P6H9 643 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 IKBKEQ14164 716 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 TARBP2Q15633 366 aaKnown RBP14.51□□□□□ -0.09
SRRM1-223ENST00000600523 ZRSR1Q15695 479 aaKnown RBP14.51□□□□□ -0.09
SRRM1-223ENST00000600523 FAM26DQ5JW98 314 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 PLA2G4FQ68DD2 849 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 CNKSR3Q6P9H4 555 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 APBB2Q92870 758 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 WNT8BQ93098 351 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 CELF4Q9BZC1 486 aaKnown RBP14.51□□□□□ -0.09
SRRM1-223ENST00000600523 DNM3Q9UQ16 869 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 CDY2AQ9Y6F7 541 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 SQORQ9Y6N5 450 aa14.51□□□□□ -0.09
SRRM1-223ENST00000600523 ABHD14A-ACY1A0A1B0GW23 586 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 ARHGEF35A5YM69 484 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 CLCN3P51790 818 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 SHHQ15465 462 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 TMEM240Q5SV17 173 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 FAM173BQ6P4H8 233 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 POTEGQ6S5H5 508 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 OTOP2Q7RTS6 562 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 KIAA0319LQ8IZA0 1049 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 LRRC71Q8N4P6 559 aa14.5□□□□□ -0.09
SRRM1-223ENST00000600523 PSPC1Q8WXF1 523 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms