RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 CCDC85BQ15834 202 aaPredicted RBP16.48■□□□□ 0.23
XRCC1-208ENST00000598422 TOP1MTQ969P6 601 aa16.48■□□□□ 0.23
XRCC1-208ENST00000598422 MAP7D2Q96T17 732 aa16.48■□□□□ 0.23
XRCC1-208ENST00000598422 FTHL17Q9BXU8 183 aa16.48■□□□□ 0.23
XRCC1-208ENST00000598422 UPF2Q9HAU5 1272 aaKnown RBP16.48■□□□□ 0.23
XRCC1-208ENST00000598422 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.47■□□□□ 0.23
XRCC1-208ENST00000598422 EPOPA6NHQ4 379 aa16.47■□□□□ 0.23
XRCC1-208ENST00000598422 ZBTB42B2RXF5 422 aa16.47■□□□□ 0.23
XRCC1-208ENST00000598422 TMOD1P28289 359 aa16.47■□□□□ 0.23
XRCC1-208ENST00000598422 NR5A1Q13285 461 aa16.47■□□□□ 0.23
XRCC1-208ENST00000598422 SKIV2LQ15477 1246 aaKnown RBP16.47■□□□□ 0.23
XRCC1-208ENST00000598422 PPP4R3AQ6IN85 833 aa16.47■□□□□ 0.23
XRCC1-208ENST00000598422 CCDC83Q8IWF9 413 aa16.47■□□□□ 0.23
XRCC1-208ENST00000598422 KIAA0319LQ8IZA0 1049 aa16.47■□□□□ 0.23
XRCC1-208ENST00000598422 TET1Q8NFU7 2136 aa16.47■□□□□ 0.23
XRCC1-208ENST00000598422 FAM20AQ96MK3 541 aa16.47■□□□□ 0.23
XRCC1-208ENST00000598422 PPP1R16BQ96T49 567 aa16.47■□□□□ 0.23
XRCC1-208ENST00000598422 TSPYL2Q9H2G4 693 aaPredicted RBP16.47■□□□□ 0.23
XRCC1-208ENST00000598422 AGO3Q9H9G7 860 aaKnown RBP16.47■□□□□ 0.23
XRCC1-208ENST00000598422 SEPT9Q9UHD8 586 aaPredicted RBP16.47■□□□□ 0.23
XRCC1-208ENST00000598422 KDM3AQ9Y4C1 1321 aa16.46■□□□□ 0.23
XRCC1-208ENST00000598422 TRIP12Q14669 1992 aaPredicted RBP16.46■□□□□ 0.23
XRCC1-208ENST00000598422 ZNF862O60290 1169 aa16.46■□□□□ 0.23
XRCC1-208ENST00000598422 MMP1P03956 469 aa16.46■□□□□ 0.23
XRCC1-208ENST00000598422 ERVK-21P61565 698 aa16.46■□□□□ 0.23
XRCC1-208ENST00000598422 HTRA4P83105 476 aaPredicted RBP16.46■□□□□ 0.23
XRCC1-208ENST00000598422 NFX1Q12986 1120 aaKnown RBP16.46■□□□□ 0.23
XRCC1-208ENST00000598422 SAFBQ15424 915 aaKnown RBP eCLIP16.46■□□□□ 0.23
XRCC1-208ENST00000598422 UGCGQ16739 394 aa16.46■□□□□ 0.23
XRCC1-208ENST00000598422 ODR4Q5SWX8 454 aa16.46■□□□□ 0.23
XRCC1-208ENST00000598422 SPRED2Q7Z698 418 aa16.46■□□□□ 0.23
XRCC1-208ENST00000598422 GDPD5Q8WTR4 605 aa16.46■□□□□ 0.23
XRCC1-208ENST00000598422 SCLT1Q96NL6 688 aa16.46■□□□□ 0.23
XRCC1-208ENST00000598422 PADI3Q9ULW8 664 aa16.46■□□□□ 0.23
XRCC1-208ENST00000598422 AKT3Q9Y243 479 aa16.46■□□□□ 0.23
XRCC1-208ENST00000598422 RPS6KA5O75582 802 aa16.45■□□□□ 0.22
XRCC1-208ENST00000598422 VTNP04004 478 aa16.45■□□□□ 0.22
XRCC1-208ENST00000598422 CLCN3P51790 818 aa16.45■□□□□ 0.22
XRCC1-208ENST00000598422 TBC1D8BQ0IIM8 1120 aa16.45■□□□□ 0.22
XRCC1-208ENST00000598422 GRB10Q13322 594 aa16.45■□□□□ 0.22
XRCC1-208ENST00000598422 KIZQ2M2Z5 673 aa16.45■□□□□ 0.22
XRCC1-208ENST00000598422 TMEM266Q2M3C6 531 aa16.45■□□□□ 0.22
XRCC1-208ENST00000598422 DIS3L2Q8IYB7 885 aaKnown RBP16.45■□□□□ 0.22
XRCC1-208ENST00000598422 SP7Q8TDD2 431 aaPredicted RBP16.45■□□□□ 0.22
XRCC1-208ENST00000598422 ZSCAN31Q96LW9 406 aaPredicted RBP16.45■□□□□ 0.22
XRCC1-208ENST00000598422 SAMD11Q96NU1 681 aa16.45■□□□□ 0.22
XRCC1-208ENST00000598422 KCNMB3Q9NPA1 279 aa16.45■□□□□ 0.22
XRCC1-208ENST00000598422 THEGQ9P2T0 379 aa16.45■□□□□ 0.22
XRCC1-208ENST00000598422 MTCH2Q9Y6C9 303 aa16.45■□□□□ 0.22
XRCC1-208ENST00000598422 DLL1O00548 723 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 ENPP3O14638 875 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 TBX3O15119 743 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 DKC1O60832 514 aaKnown RBP eCLIP16.44■□□□□ 0.22
XRCC1-208ENST00000598422 BAG4O95429 457 aaKnown RBP16.44■□□□□ 0.22
XRCC1-208ENST00000598422 IBSPP21815 317 aaPredicted RBP16.44■□□□□ 0.22
XRCC1-208ENST00000598422 CRYBB1P53674 252 aaPredicted RBP16.44■□□□□ 0.22
XRCC1-208ENST00000598422 PSMC5P62195 406 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 ST3GAL1Q11201 340 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 PPP2R5CQ13362 524 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 MTERF2Q49AM1 385 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 XKR3Q5GH77 459 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 KRT40Q6A162 431 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 EFCAB12Q6NXP0 572 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 POTEDQ86YR6 584 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 LRRC71Q8N4P6 559 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 BANK1Q8NDB2 785 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 FBXO22Q8NEZ5 403 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 OSMRQ99650 979 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 C17orf80Q9BSJ5 609 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 SUGCTQ9HAC7 445 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 SH2B1Q9NRF2 756 aaPredicted RBP16.44■□□□□ 0.22
XRCC1-208ENST00000598422 VAV3Q9UKW4 847 aa16.44■□□□□ 0.22
XRCC1-208ENST00000598422 DENND3A2RUS2 1198 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 FAM205CA6NFA0 338 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 BTBD18B2RXH4 712 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 GPR182O15218 404 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 STAG3L1P0CL83 205 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 HMGN5P82970 282 aaKnown RBP16.43■□□□□ 0.22
XRCC1-208ENST00000598422 RABEP1Q15276 862 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 EARS2Q5JPH6 523 aaKnown RBP16.43■□□□□ 0.22
XRCC1-208ENST00000598422 B3GNT9Q6UX72 402 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 NPAS4Q8IUM7 802 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 SLFN12Q8IYM2 578 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 ZNF710Q8N1W2 664 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 FIBCD1Q8N539 461 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 FAM184AQ8NB25 1140 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 LINC01599Q8WXQ3 324 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 C8orf76Q96K31 380 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 LLPHQ9BRT6 129 aaKnown RBP16.43■□□□□ 0.22
XRCC1-208ENST00000598422 LRFN2Q9ULH4 789 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 ADGRA3Q8IWK6 1321 aa16.43■□□□□ 0.22
XRCC1-208ENST00000598422 DDX11L8A8MPP1 907 aa16.42■□□□□ 0.22
XRCC1-208ENST00000598422 POU3F3P20264 500 aaPredicted RBP16.42■□□□□ 0.22
XRCC1-208ENST00000598422 RBM25P49756 843 aaKnown RBP16.42■□□□□ 0.22
XRCC1-208ENST00000598422 NLRP11P59045 1033 aaKnown RBP16.42■□□□□ 0.22
XRCC1-208ENST00000598422 GUCY1B3Q02153 619 aa16.42■□□□□ 0.22
XRCC1-208ENST00000598422 GNL2Q13823 731 aaKnown RBP16.42■□□□□ 0.22
XRCC1-208ENST00000598422 NCAPH2Q6IBW4 605 aa16.42■□□□□ 0.22
XRCC1-208ENST00000598422 FAM43BQ6ZT52 329 aaPredicted RBP16.42■□□□□ 0.22
XRCC1-208ENST00000598422 IL27Q8NEV9 243 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms