RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 EDAQ92838 391 aa14.25□□□□□ -0.13
TRIM28-212ENST00000597995 FBXL18Q96ME1 805 aa14.25□□□□□ -0.13
TRIM28-212ENST00000597995 ANO3Q9BYT9 981 aa14.25□□□□□ -0.13
TRIM28-212ENST00000597995 ERVK-5Q9HDB9 667 aa14.25□□□□□ -0.13
TRIM28-212ENST00000597995 AAASQ9NRG9 546 aa14.25□□□□□ -0.13
TRIM28-212ENST00000597995 C1orf112Q9NSG2 853 aa14.25□□□□□ -0.13
TRIM28-212ENST00000597995 MUTYHQ9UIF7 546 aa14.25□□□□□ -0.13
TRIM28-212ENST00000597995 ZNF318Q5VUA4 2279 aa14.25□□□□□ -0.13
TRIM28-212ENST00000597995 COL1A2P08123 1366 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 TRIOO75962 3097 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 FSD2A1L4K1 749 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 RPS6KA5O75582 802 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 CSPG5O95196 566 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 HSPA4P34932 840 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 NRIP1P48552 1158 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 ADCY7P51828 1080 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 NHLH1Q02575 133 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 FUT2Q10981 343 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 ZNF484Q5JVG2 852 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 FAM160B1Q5W0V3 765 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 ABHD15Q6UXT9 468 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 SLC24A5Q71RS6 500 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 KIAA0319LQ8IZA0 1049 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 ATP8B4Q8TF62 1192 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 RGS18Q9NS28 235 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 FAM217BQ9NTX9 383 aaPredicted RBP14.24□□□□□ -0.13
TRIM28-212ENST00000597995 PCDHB12Q9Y5F1 795 aa14.24□□□□□ -0.13
TRIM28-212ENST00000597995 V9GY48 417 aaPredicted RBP14.24□□□□□ -0.13
TRIM28-212ENST00000597995 KIAA1671Q9BY89 1806 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 SMCO2A6NFE2 343 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 LOC730098B7Z3J9 87 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 BACH1O14867 736 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 GPR182O15218 404 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 CCNE2O96020 404 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 CLK2P49760 499 aaKnown RBP14.23□□□□□ -0.13
TRIM28-212ENST00000597995 MRE11P49959 708 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 GATMP50440 423 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 CBX2Q14781 532 aaPredicted RBP14.23□□□□□ -0.13
TRIM28-212ENST00000597995 RTN1Q16799 776 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 TMEM266Q2M3C6 531 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 PDE12Q6L8Q7 609 aaKnown RBP14.23□□□□□ -0.13
TRIM28-212ENST00000597995 PGBD1Q96JS3 809 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 ADAM2Q99965 735 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 TLE6Q9H808 572 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 BARHL2Q9NY43 387 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 NOC2LQ9Y3T9 749 aaKnown RBP14.23□□□□□ -0.13
TRIM28-212ENST00000597995 SNX14Q9Y5W7 946 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 TECTAO75443 2155 aa14.23□□□□□ -0.13
TRIM28-212ENST00000597995 DENND3A2RUS2 1198 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 C9IYK1 514 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 DHX15O43143 795 aaKnown RBP14.22□□□□□ -0.13
TRIM28-212ENST00000597995 ZBTB43O43298 467 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 MGEA5O60502 916 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 GLP2RO95838 553 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 ZNF76P36508 570 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 FAM189BP81408 668 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 KRT32Q14532 448 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 PKN1Q16512 942 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 MIS18BP1Q6P0N0 1132 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 PDXDC2PQ6P474 469 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 RBM23Q86U06 439 aaKnown RBP14.22□□□□□ -0.13
TRIM28-212ENST00000597995 MICAL1Q8TDZ2 1067 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 CDCA3Q99618 268 aaPredicted RBP14.22□□□□□ -0.13
TRIM28-212ENST00000597995 ELAC1Q9H777 363 aaKnown RBP14.22□□□□□ -0.13
TRIM28-212ENST00000597995 CDHR5Q9HBB8 845 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 ZNF302Q9NR11 478 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 ST3GAL5Q9UNP4 418 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 GINS2Q9Y248 185 aa14.22□□□□□ -0.13
TRIM28-212ENST00000597995 WDFY4Q6ZS81 3184 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 TBKBP1A7MCY6 615 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 ZBTB42B2RXF5 422 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 PPFIA3O75145 1194 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 FGF18O76093 207 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 NEFLP07196 543 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 CYP3A4P08684 503 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 ATF7P17544 494 aaPredicted RBP14.21□□□□□ -0.13
TRIM28-212ENST00000597995 CDC27P30260 824 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 CRYBB1P53674 252 aaPredicted RBP14.21□□□□□ -0.13
TRIM28-212ENST00000597995 RCAN1P53805 252 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 SPOUT1Q5T280 376 aaKnown RBP14.21□□□□□ -0.13
TRIM28-212ENST00000597995 MCTP2Q6DN12 878 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 SWSAP1Q6NVH7 229 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 TRIM67Q6ZTA4 783 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 PLA2G4DQ86XP0 818 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 CCDC60Q8IWA6 550 aaPredicted RBP14.21□□□□□ -0.13
TRIM28-212ENST00000597995 TMEM40Q8WWA1 233 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 CRYGNQ8WXF5 182 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 BBXQ8WY36 941 aaPredicted RBP14.21□□□□□ -0.13
TRIM28-212ENST00000597995 JAKMIP1Q96N16 626 aaKnown RBP14.21□□□□□ -0.13
TRIM28-212ENST00000597995 PHF7Q9BWX1 381 aaPredicted RBP14.21□□□□□ -0.13
TRIM28-212ENST00000597995 TLR9Q9NR96 1032 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 TMEM161AQ9NX61 479 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 TMEM260Q9NX78 707 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 BARX2Q9UMQ3 279 aaPredicted RBP14.21□□□□□ -0.13
TRIM28-212ENST00000597995 LZTS1Q9Y250 596 aa14.21□□□□□ -0.13
TRIM28-212ENST00000597995 USP15Q9Y4E8 981 aaPredicted RBP14.21□□□□□ -0.13
TRIM28-212ENST00000597995 FNDC1Q4ZHG4 1894 aaPredicted RBP14.21□□□□□ -0.14
TRIM28-212ENST00000597995 EVPLQ92817 2033 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 IGLV3-22A0A075B6J6 115 aa14.2□□□□□ -0.14
TRIM28-212ENST00000597995 KLF18A0A0U1RQI7 1052 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms