RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 KLRC1P26715 233 aa20.28■□□□□ 0.84
HOMER3-208ENST00000595756 TOB2Q14106 344 aaPredicted RBP20.28■□□□□ 0.84
HOMER3-208ENST00000595756 PRR16Q569H4 304 aa20.28■□□□□ 0.84
HOMER3-208ENST00000595756 NPAS4Q8IUM7 802 aa20.28■□□□□ 0.84
HOMER3-208ENST00000595756 CRIPAKQ8N1N5 446 aa20.28■□□□□ 0.84
HOMER3-208ENST00000595756 BANK1Q8NDB2 785 aa20.28■□□□□ 0.84
HOMER3-208ENST00000595756 BBXQ8WY36 941 aaPredicted RBP20.28■□□□□ 0.84
HOMER3-208ENST00000595756 LMAN2LQ9H0V9 348 aa20.28■□□□□ 0.84
HOMER3-208ENST00000595756 NCOA5Q9HCD5 579 aaKnown RBP20.28■□□□□ 0.84
HOMER3-208ENST00000595756 VPS54Q9P1Q0 977 aa20.28■□□□□ 0.84
HOMER3-208ENST00000595756 MAFBQ9Y5Q3 323 aaPredicted RBP20.28■□□□□ 0.84
HOMER3-208ENST00000595756 ATP4AP20648 1035 aa20.27■□□□□ 0.84
HOMER3-208ENST00000595756 BMPR1AP36894 532 aa20.27■□□□□ 0.84
HOMER3-208ENST00000595756 CCT2P78371 535 aaKnown RBP20.27■□□□□ 0.84
HOMER3-208ENST00000595756 BTG3Q14201 252 aaPredicted RBP20.27■□□□□ 0.84
HOMER3-208ENST00000595756 LEXMQ3ZCV2 418 aa20.27■□□□□ 0.84
HOMER3-208ENST00000595756 SWSAP1Q6NVH7 229 aa20.27■□□□□ 0.84
HOMER3-208ENST00000595756 TRIM22Q8IYM9 498 aa20.27■□□□□ 0.84
HOMER3-208ENST00000595756 CMTR2Q8IYT2 770 aaKnown RBP20.27■□□□□ 0.84
HOMER3-208ENST00000595756 NSUN3Q9H649 340 aaKnown RBP20.27■□□□□ 0.84
HOMER3-208ENST00000595756 PCDHA10Q9Y5I2 948 aa20.27■□□□□ 0.84
HOMER3-208ENST00000595756 C22orf31O95567 290 aa20.26■□□□□ 0.83
HOMER3-208ENST00000595756 PSAPP07602 524 aa20.26■□□□□ 0.83
HOMER3-208ENST00000595756 COL19A1Q14993 1142 aa20.26■□□□□ 0.83
HOMER3-208ENST00000595756 ZNF274Q96GC6 653 aaPredicted RBP20.26■□□□□ 0.83
HOMER3-208ENST00000595756 FAM167AQ96KS9 214 aa20.26■□□□□ 0.83
HOMER3-208ENST00000595756 PLVAPQ9BX97 442 aa20.26■□□□□ 0.83
HOMER3-208ENST00000595756 CEP131Q9UPN4 1083 aa20.26■□□□□ 0.83
HOMER3-208ENST00000595756 FNDC1Q4ZHG4 1894 aaPredicted RBP20.26■□□□□ 0.83
HOMER3-208ENST00000595756 WDR64B1ANS9 1081 aa20.25■□□□□ 0.83
HOMER3-208ENST00000595756 PPFIA3O75145 1194 aa20.25■□□□□ 0.83
HOMER3-208ENST00000595756 STAG3L1P0CL83 205 aa20.25■□□□□ 0.83
HOMER3-208ENST00000595756 KCNA5P22460 613 aa20.25■□□□□ 0.83
HOMER3-208ENST00000595756 NEK4P51957 841 aa20.25■□□□□ 0.83
HOMER3-208ENST00000595756 ODR4Q5SWX8 454 aa20.25■□□□□ 0.83
HOMER3-208ENST00000595756 RTN4RL1Q86UN2 441 aaPredicted RBP20.25■□□□□ 0.83
HOMER3-208ENST00000595756 CKAP2LQ8IYA6 745 aa20.25■□□□□ 0.83
HOMER3-208ENST00000595756 KIAA0319LQ8IZA0 1049 aa20.25■□□□□ 0.83
HOMER3-208ENST00000595756 FAM177A1Q8N128 213 aaPredicted RBP20.25■□□□□ 0.83
HOMER3-208ENST00000595756 TMX1Q9H3N1 280 aa20.25■□□□□ 0.83
HOMER3-208ENST00000595756 DEXIO95424 95 aa20.24■□□□□ 0.83
HOMER3-208ENST00000595756 USP11P51784 963 aa20.24■□□□□ 0.83
HOMER3-208ENST00000595756 TCEAL5Q5H9L2 206 aa20.24■□□□□ 0.83
HOMER3-208ENST00000595756 NEK9Q8TD19 979 aa20.24■□□□□ 0.83
HOMER3-208ENST00000595756 P2RX5Q93086 422 aa20.24■□□□□ 0.83
HOMER3-208ENST00000595756 PABPC5Q96DU9 382 aaKnown RBP20.24■□□□□ 0.83
HOMER3-208ENST00000595756 UIMC1Q96RL1 719 aa20.24■□□□□ 0.83
HOMER3-208ENST00000595756 RIT2Q99578 217 aa20.24■□□□□ 0.83
HOMER3-208ENST00000595756 ERVK-5Q9HDB9 667 aa20.24■□□□□ 0.83
HOMER3-208ENST00000595756 CPLX1O14810 134 aa20.23■□□□□ 0.83
HOMER3-208ENST00000595756 MSH4O15457 936 aa20.23■□□□□ 0.83
HOMER3-208ENST00000595756 RPS6KA5O75582 802 aa20.23■□□□□ 0.83
HOMER3-208ENST00000595756 MMP1P03956 469 aa20.23■□□□□ 0.83
HOMER3-208ENST00000595756 SARSP49591 514 aaKnown RBP20.23■□□□□ 0.83
HOMER3-208ENST00000595756 NLRP5P59047 1200 aa20.23■□□□□ 0.83
HOMER3-208ENST00000595756 SSRP1Q08945 709 aaKnown RBP20.23■□□□□ 0.83
HOMER3-208ENST00000595756 TMEM266Q2M3C6 531 aa20.23■□□□□ 0.83
HOMER3-208ENST00000595756 PUS10Q3MIT2 529 aaKnown RBP20.23■□□□□ 0.83
HOMER3-208ENST00000595756 DAGLBQ8NCG7 672 aa20.23■□□□□ 0.83
HOMER3-208ENST00000595756 TMEM40Q8WWA1 233 aa20.23■□□□□ 0.83
HOMER3-208ENST00000595756 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
HOMER3-208ENST00000595756 GABBR1Q9UBS5 961 aa20.23■□□□□ 0.83
HOMER3-208ENST00000595756 PCDHA4Q9UN74 947 aa20.23■□□□□ 0.83
HOMER3-208ENST00000595756 GINS2Q9Y248 185 aa20.23■□□□□ 0.83
HOMER3-208ENST00000595756 NOC2LQ9Y3T9 749 aaKnown RBP20.23■□□□□ 0.83
HOMER3-208ENST00000595756 SAMM50Q9Y512 469 aa20.23■□□□□ 0.83
HOMER3-208ENST00000595756 MRPL42Q9Y6G3 142 aaKnown RBP20.23■□□□□ 0.83
HOMER3-208ENST00000595756 MYO7AQ13402 2215 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 GRM6O15303 877 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 NCK2O43639 380 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 EDIL3O43854 480 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 SFNP31947 248 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 RABEP1Q15276 862 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 NAALADL2Q58DX5 795 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 CPLX2Q6PUV4 134 aaKnown RBP20.22■□□□□ 0.83
HOMER3-208ENST00000595756 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.22■□□□□ 0.83
HOMER3-208ENST00000595756 TBCKQ8TEA7 893 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 SLC5A5Q92911 643 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 TBC1D32Q96NH3 1257 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 C1QTNF1Q9BXJ1 281 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 DISC1Q9NRI5 854 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 C1orf112Q9NSG2 853 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 PLXNA4Q9HCM2 1894 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 C5orf42Q9H799 3197 aa20.22■□□□□ 0.83
HOMER3-208ENST00000595756 M0R2N6 131 aa20.21■□□□□ 0.83
HOMER3-208ENST00000595756 GPR182O15218 404 aa20.21■□□□□ 0.83
HOMER3-208ENST00000595756 MAGEB2O15479 319 aa20.21■□□□□ 0.83
HOMER3-208ENST00000595756 MGEA5O60502 916 aa20.21■□□□□ 0.83
HOMER3-208ENST00000595756 GAS7O60861 476 aa20.21■□□□□ 0.83
HOMER3-208ENST00000595756 OATP04181 439 aa20.21■□□□□ 0.83
HOMER3-208ENST00000595756 JAK3P52333 1124 aa20.21■□□□□ 0.83
HOMER3-208ENST00000595756 CRYBB1P53674 252 aaPredicted RBP20.21■□□□□ 0.83
HOMER3-208ENST00000595756 PRKCEQ02156 737 aa20.21■□□□□ 0.83
HOMER3-208ENST00000595756 NFX1Q12986 1120 aaKnown RBP20.21■□□□□ 0.83
HOMER3-208ENST00000595756 Q4G0T1 1027 aa20.21■□□□□ 0.83
HOMER3-208ENST00000595756 LRCH2Q5VUJ6 765 aa20.21■□□□□ 0.83
HOMER3-208ENST00000595756 GALNT17Q6IS24 598 aa20.21■□□□□ 0.83
HOMER3-208ENST00000595756 ZNF710Q8N1W2 664 aa20.21■□□□□ 0.83
HOMER3-208ENST00000595756 LINC01465Q8N7H1 131 aa20.21■□□□□ 0.83
HOMER3-208ENST00000595756 OSMRQ99650 979 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms