RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 RPLP2P05387 115 aaKnown RBP16.63■□□□□ 0.25
USE1-205ENST00000594724 GCFC2P16383 781 aaKnown RBP16.63■□□□□ 0.25
USE1-205ENST00000594724 IGFBP4P22692 258 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 CD52P31358 61 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 PRKCEQ02156 737 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 ADGRE1Q14246 886 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 NME8Q8N427 588 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 METTL13Q8N6R0 699 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 HAS1Q92839 578 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 FAM167AQ96KS9 214 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 FAM20AQ96MK3 541 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 PPP1R16BQ96T49 567 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 RAD9AQ99638 391 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 LLPHQ9BRT6 129 aaKnown RBP16.63■□□□□ 0.25
USE1-205ENST00000594724 CELF4Q9BZC1 486 aaKnown RBP16.63■□□□□ 0.25
USE1-205ENST00000594724 CDHR5Q9HBB8 845 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 SH2B1Q9NRF2 756 aaPredicted RBP16.63■□□□□ 0.25
USE1-205ENST00000594724 GINS2Q9Y248 185 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 SIP14410 1827 aa16.62■□□□□ 0.25
USE1-205ENST00000594724 MARCH6O60337 910 aa16.62■□□□□ 0.25
USE1-205ENST00000594724 RABEP1Q15276 862 aa16.62■□□□□ 0.25
USE1-205ENST00000594724 TSHZ1Q6ZSZ6 1077 aa16.62■□□□□ 0.25
USE1-205ENST00000594724 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
USE1-205ENST00000594724 BANK1Q8NDB2 785 aa16.62■□□□□ 0.25
USE1-205ENST00000594724 RDM1Q8NG50 284 aa16.62■□□□□ 0.25
USE1-205ENST00000594724 ARNTL2Q8WYA1 636 aa16.62■□□□□ 0.25
USE1-205ENST00000594724 TOP1MTQ969P6 601 aa16.62■□□□□ 0.25
USE1-205ENST00000594724 NAP1L4Q99733 375 aaKnown RBP16.62■□□□□ 0.25
USE1-205ENST00000594724 UPF2Q9HAU5 1272 aaKnown RBP16.62■□□□□ 0.25
USE1-205ENST00000594724 TMEM150BA6NC51 233 aa16.61■□□□□ 0.25
USE1-205ENST00000594724 EPOPA6NHQ4 379 aa16.61■□□□□ 0.25
USE1-205ENST00000594724 WNT7AO00755 349 aa16.61■□□□□ 0.25
USE1-205ENST00000594724 ENPP3O14638 875 aa16.61■□□□□ 0.25
USE1-205ENST00000594724 VTNP04004 478 aa16.61■□□□□ 0.25
USE1-205ENST00000594724 CLCN3P51790 818 aa16.61■□□□□ 0.25
USE1-205ENST00000594724 LRRC71Q8N4P6 559 aa16.61■□□□□ 0.25
USE1-205ENST00000594724 PPM1EQ8WY54 764 aa16.61■□□□□ 0.25
USE1-205ENST00000594724 C8orf76Q96K31 380 aa16.61■□□□□ 0.25
USE1-205ENST00000594724 VAV3Q9UKW4 847 aa16.61■□□□□ 0.25
USE1-205ENST00000594724 PADI3Q9ULW8 664 aa16.61■□□□□ 0.25
USE1-205ENST00000594724 CEP131Q9UPN4 1083 aa16.61■□□□□ 0.25
USE1-205ENST00000594724 MYH9P35579 1960 aaKnown RBP16.6■□□□□ 0.25
USE1-205ENST00000594724 MICAL3Q7RTP6 2002 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 EYSQ5T1H1 3165 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 DDX11L8A8MPP1 907 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 TBX3O15119 743 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 STBD1O95210 358 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 ATP2B1P20020 1258 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 PPP2R5CQ13362 524 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 KIZQ2M2Z5 673 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 TMEM266Q2M3C6 531 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 EFCAB12Q6NXP0 572 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 RTN4RL1Q86UN2 441 aaPredicted RBP16.6■□□□□ 0.25
USE1-205ENST00000594724 USP38Q8NB14 1042 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 SH2D3AQ9BRG2 576 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 INSL6Q9Y581 213 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 SQORQ9Y6N5 450 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 KDM3AQ9Y4C1 1321 aa16.6■□□□□ 0.25
USE1-205ENST00000594724 CHD7Q9P2D1 2997 aa16.59■□□□□ 0.25
USE1-205ENST00000594724 LINC01553A4QN01 128 aa16.59■□□□□ 0.25
USE1-205ENST00000594724 MAGEB2O15479 319 aa16.59■□□□□ 0.25
USE1-205ENST00000594724 ST18O60284 1047 aa16.59■□□□□ 0.25
USE1-205ENST00000594724 CD2BP2O95400 341 aaKnown RBP16.59■□□□□ 0.25
USE1-205ENST00000594724 BAG4O95429 457 aaKnown RBP16.59■□□□□ 0.25
USE1-205ENST00000594724 HMGN5P82970 282 aaKnown RBP16.59■□□□□ 0.25
USE1-205ENST00000594724 HTRA4P83105 476 aaPredicted RBP16.59■□□□□ 0.25
USE1-205ENST00000594724 NFX1Q12986 1120 aaKnown RBP16.59■□□□□ 0.25
USE1-205ENST00000594724 PAK2Q13177 524 aa16.59■□□□□ 0.25
USE1-205ENST00000594724 SAFBQ15424 915 aaKnown RBP eCLIP16.59■□□□□ 0.25
USE1-205ENST00000594724 CCDC85BQ15834 202 aaPredicted RBP16.59■□□□□ 0.25
USE1-205ENST00000594724 MTERF2Q49AM1 385 aa16.59■□□□□ 0.25
USE1-205ENST00000594724 XKR3Q5GH77 459 aa16.59■□□□□ 0.25
USE1-205ENST00000594724 FAM184AQ8NB25 1140 aa16.59■□□□□ 0.25
USE1-205ENST00000594724 TMEM40Q8WWA1 233 aa16.59■□□□□ 0.25
USE1-205ENST00000594724 LINC01599Q8WXQ3 324 aa16.59■□□□□ 0.25
USE1-205ENST00000594724 ZNF668Q96K58 619 aaPredicted RBP16.59■□□□□ 0.25
USE1-205ENST00000594724 SUGCTQ9HAC7 445 aa16.59■□□□□ 0.25
USE1-205ENST00000594724 SEPT9Q9UHD8 586 aaPredicted RBP16.59■□□□□ 0.25
USE1-205ENST00000594724 MTUS1Q9ULD2 1270 aa16.59■□□□□ 0.25
USE1-205ENST00000594724 AKT3Q9Y243 479 aa16.59■□□□□ 0.25
USE1-205ENST00000594724 NOC2LQ9Y3T9 749 aaKnown RBP16.59■□□□□ 0.25
USE1-205ENST00000594724 GPR32O75388 356 aa16.58■□□□□ 0.24
USE1-205ENST00000594724 PSMC5P62195 406 aa16.58■□□□□ 0.24
USE1-205ENST00000594724 TBC1D8BQ0IIM8 1120 aa16.58■□□□□ 0.24
USE1-205ENST00000594724 TARBP2Q15633 366 aaKnown RBP16.58■□□□□ 0.24
USE1-205ENST00000594724 NCAPH2Q6IBW4 605 aa16.58■□□□□ 0.24
USE1-205ENST00000594724 SLFN12Q8IYM2 578 aa16.58■□□□□ 0.24
USE1-205ENST00000594724 LINC01465Q8N7H1 131 aa16.58■□□□□ 0.24
USE1-205ENST00000594724 TBC1D32Q96NH3 1257 aa16.58■□□□□ 0.24
USE1-205ENST00000594724 CEP89Q96ST8 783 aa16.58■□□□□ 0.24
USE1-205ENST00000594724 YME1L1Q96TA2 773 aa16.58■□□□□ 0.24
USE1-205ENST00000594724 OSMRQ99650 979 aa16.58■□□□□ 0.24
USE1-205ENST00000594724 NIFKQ9BYG3 293 aaKnown RBP16.58■□□□□ 0.24
USE1-205ENST00000594724 TMX1Q9H3N1 280 aa16.58■□□□□ 0.24
USE1-205ENST00000594724 WDR81Q562E7 1941 aa16.58■□□□□ 0.24
USE1-205ENST00000594724 EVPLQ92817 2033 aa16.58■□□□□ 0.24
USE1-205ENST00000594724 RPS6KA5O75582 802 aa16.57■□□□□ 0.24
USE1-205ENST00000594724 P4HBP07237 508 aaKnown RBP16.57■□□□□ 0.24
USE1-205ENST00000594724 TMOD1P28289 359 aa16.57■□□□□ 0.24
USE1-205ENST00000594724 QARSP47897 775 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms