RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 SBF2Q86WG5 1849 aa19.56■□□□□ 0.72
SPC24-206ENST00000592540 CYP11B2P19099 503 aa19.56■□□□□ 0.72
SPC24-206ENST00000592540 ELF3P78545 371 aaPredicted RBP19.56■□□□□ 0.72
SPC24-206ENST00000592540 NBPF9Q3BBW0 867 aa19.56■□□□□ 0.72
SPC24-206ENST00000592540 MSL1Q68DK7 614 aa19.56■□□□□ 0.72
SPC24-206ENST00000592540 PAXIP1Q6ZW49 1069 aaPredicted RBP19.56■□□□□ 0.72
SPC24-206ENST00000592540 VPS36Q86VN1 386 aa19.56■□□□□ 0.72
SPC24-206ENST00000592540 HOOK3Q86VS8 718 aa19.56■□□□□ 0.72
SPC24-206ENST00000592540 MIEF2Q96C03 454 aa19.56■□□□□ 0.72
SPC24-206ENST00000592540 ZNF317Q96PQ6 595 aaPredicted RBP19.56■□□□□ 0.72
SPC24-206ENST00000592540 INTUQ9ULD6 942 aa19.56■□□□□ 0.72
SPC24-206ENST00000592540 TTC7AQ9ULT0 858 aaPredicted RBP19.56■□□□□ 0.72
SPC24-206ENST00000592540 FGGP02679 453 aa19.56■□□□□ 0.72
SPC24-206ENST00000592540 SCP2P22307 547 aa19.56■□□□□ 0.72
SPC24-206ENST00000592540 AMFRQ9UKV5 643 aa19.56■□□□□ 0.72
SPC24-206ENST00000592540 NR2E1Q9Y466 385 aa19.56■□□□□ 0.72
SPC24-206ENST00000592540 NHSQ6T4R5 1651 aa19.55■□□□□ 0.72
SPC24-206ENST00000592540 CHN1P15882 459 aa19.55■□□□□ 0.72
SPC24-206ENST00000592540 NOVP48745 357 aa19.55■□□□□ 0.72
SPC24-206ENST00000592540 NLRP3Q96P20 1036 aa19.55■□□□□ 0.72
SPC24-206ENST00000592540 RAB17Q9H0T7 212 aa19.55■□□□□ 0.72
SPC24-206ENST00000592540 EPB41L4BQ9H329 900 aa19.55■□□□□ 0.72
SPC24-206ENST00000592540 ZHX3Q9H4I2 956 aa19.55■□□□□ 0.72
SPC24-206ENST00000592540 ATP6V0A4Q9HBG4 840 aa19.55■□□□□ 0.72
SPC24-206ENST00000592540 AJAP1Q9UKB5 411 aaPredicted RBP19.55■□□□□ 0.72
SPC24-206ENST00000592540 POTEB3A0JP26 581 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 FRMD3A2A2Y4 597 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 POTECB2RU33 542 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 DDX3XO00571 662 aaKnown RBP eCLIP19.54■□□□□ 0.725e-7■■■□□ 17.7
SPC24-206ENST00000592540 ATP6V1G2O95670 118 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 SHBGP04278 402 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 GCFC2P16383 781 aaKnown RBP19.54■□□□□ 0.72
SPC24-206ENST00000592540 CASP5P51878 434 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 JAM2P57087 298 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 EPHA7Q15375 998 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 CHADLQ6NUI6 762 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 POTEBQ6S5H4 581 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 ANKS4BQ8N8V4 417 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 U2AF1L4Q8WU68 220 aaKnown RBP19.54■□□□□ 0.72
SPC24-206ENST00000592540 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.54■□□□□ 0.722e-7■■■■■ 48.7
SPC24-206ENST00000592540 KRT18P05783 430 aaKnown RBP19.54■□□□□ 0.72
SPC24-206ENST00000592540 LDHCP07864 332 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 MMEP08473 750 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 NUDT17P0C025 328 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 PTENP60484 403 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 ARSHQ5FYA8 562 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 HIBCHQ6NVY1 386 aaPredicted RBP19.54■□□□□ 0.72
SPC24-206ENST00000592540 TLDC1Q6P9B6 456 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 UIMC1Q96RL1 719 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 RTFDC1Q9BY42 306 aaPredicted RBP19.54■□□□□ 0.72
SPC24-206ENST00000592540 SIX2Q9NPC8 291 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 ZDHHC18Q9NUE0 388 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 TRAF3IP3Q9Y228 551 aa19.54■□□□□ 0.72
SPC24-206ENST00000592540 ASAP2O43150 1006 aa19.53■□□□□ 0.72
SPC24-206ENST00000592540 XRCC5P13010 732 aaKnown RBP19.53■□□□□ 0.72
SPC24-206ENST00000592540 MMP13P45452 471 aa19.53■□□□□ 0.72
SPC24-206ENST00000592540 CLK2P49760 499 aaKnown RBP19.53■□□□□ 0.72
SPC24-206ENST00000592540 GALCP54803 685 aa19.53■□□□□ 0.72
SPC24-206ENST00000592540 PPP1R7Q15435 360 aa19.53■□□□□ 0.72
SPC24-206ENST00000592540 DUPD1Q68J44 220 aa19.53■□□□□ 0.72
SPC24-206ENST00000592540 ATXN2LQ8WWM7 1075 aaKnown RBP19.53■□□□□ 0.72
SPC24-206ENST00000592540 COL5A3P25940 1745 aaPredicted RBP19.53■□□□□ 0.72
SPC24-206ENST00000592540 ITIH4Q14624 930 aa19.53■□□□□ 0.72
SPC24-206ENST00000592540 TBC1D9BQ66K14 1250 aa19.53■□□□□ 0.72
SPC24-206ENST00000592540 PIGWQ7Z7B1 504 aa19.53■□□□□ 0.72
SPC24-206ENST00000592540 PGM2Q96G03 612 aa19.53■□□□□ 0.72
SPC24-206ENST00000592540 SELENOSQ9BQE4 189 aa19.53■□□□□ 0.72
SPC24-206ENST00000592540 ERP44Q9BS26 406 aa19.53■□□□□ 0.72
SPC24-206ENST00000592540 ADAM7Q9H2U9 754 aa19.53■□□□□ 0.72
SPC24-206ENST00000592540 NOD2Q9HC29 1040 aa19.53■□□□□ 0.72
SPC24-206ENST00000592540 COL14A1Q05707 1796 aaKnown RBP19.53■□□□□ 0.72
SPC24-206ENST00000592540 PITPNM2Q9BZ72 1349 aa19.52■□□□□ 0.72
SPC24-206ENST00000592540 BUB1BO60566 1050 aaPredicted RBP19.52■□□□□ 0.72
SPC24-206ENST00000592540 GSTA1P08263 222 aa19.52■□□□□ 0.72
SPC24-206ENST00000592540 PMS2P54278 862 aa19.52■□□□□ 0.72
SPC24-206ENST00000592540 DR1Q01658 176 aa19.52■□□□□ 0.72
SPC24-206ENST00000592540 ASPRV1Q53RT3 343 aa19.52■□□□□ 0.72
SPC24-206ENST00000592540 DCAF17Q5H9S7 520 aaPredicted RBP19.52■□□□□ 0.72
SPC24-206ENST00000592540 DCAF12L1Q5VU92 463 aa19.52■□□□□ 0.72
SPC24-206ENST00000592540 PPP1R18Q6NYC8 613 aa19.52■□□□□ 0.72
SPC24-206ENST00000592540 PABPC3Q9H361 631 aaKnown RBP19.52■□□□□ 0.72
SPC24-206ENST00000592540 GOPCQ9HD26 462 aa19.52■□□□□ 0.72
SPC24-206ENST00000592540 OSGEPQ9NPF4 335 aa19.52■□□□□ 0.72
SPC24-206ENST00000592540 SLC12A4Q9UP95 1085 aa19.52■□□□□ 0.72
SPC24-206ENST00000592540 SPDYE3A6NKU9 549 aa19.52■□□□□ 0.71
SPC24-206ENST00000592540 DDX3YO15523 660 aaKnown RBP19.52■□□□□ 0.71
SPC24-206ENST00000592540 HOXD13P35453 343 aa19.52■□□□□ 0.71
SPC24-206ENST00000592540 BTDP43251 543 aa19.52■□□□□ 0.71
SPC24-206ENST00000592540 SLC12A3P55017 1021 aa19.52■□□□□ 0.71
SPC24-206ENST00000592540 KNOP1Q1ED39 458 aaKnown RBP19.52■□□□□ 0.71
SPC24-206ENST00000592540 GJB7Q6PEY0 223 aa19.52■□□□□ 0.71
SPC24-206ENST00000592540 GPCPD1Q9NPB8 672 aa19.52■□□□□ 0.71
SPC24-206ENST00000592540 PPP1R9AQ9ULJ8 1098 aa19.52■□□□□ 0.71
SPC24-206ENST00000592540 DAAM1Q9Y4D1 1078 aa19.52■□□□□ 0.71
SPC24-206ENST00000592540 KLRC3Q07444 240 aa19.51■□□□□ 0.71
SPC24-206ENST00000592540 TCERG1LQ5VWI1 586 aa19.51■□□□□ 0.71
SPC24-206ENST00000592540 TEX11Q8IYF3 940 aa19.51■□□□□ 0.71
SPC24-206ENST00000592540 LRRC34Q8IZ02 419 aa19.51■□□□□ 0.71
SPC24-206ENST00000592540 LNX1Q8TBB1 728 aaPredicted RBP19.51■□□□□ 0.71
SPC24-206ENST00000592540 NEK9Q8TD19 979 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms