RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 PPP4R3AQ6IN85 833 aa22.79■■□□□ 1.24
CIRBP-239ENST00000592467 LINC01465Q8N7H1 131 aa22.79■■□□□ 1.24
CIRBP-239ENST00000592467 WASF1Q92558 559 aa22.79■■□□□ 1.24
CIRBP-239ENST00000592467 KCNMB3Q9NPA1 279 aa22.79■■□□□ 1.24
CIRBP-239ENST00000592467 DDX25Q9UHL0 483 aaKnown RBP22.79■■□□□ 1.24
CIRBP-239ENST00000592467 INSL6Q9Y581 213 aa22.79■■□□□ 1.24
CIRBP-239ENST00000592467 VCANP13611 3396 aa22.79■■□□□ 1.24
CIRBP-239ENST00000592467 SPTBN5Q9NRC6 3674 aaKnown RBP22.78■■□□□ 1.24
CIRBP-239ENST00000592467 ENPP3O14638 875 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 CHMP2AO43633 222 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 CD52P31358 61 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 SFNP31947 248 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 JAK3P52333 1124 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 ERVK-21P61565 698 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 NR5A1Q13285 461 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 LETM2Q2VYF4 491 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 PIK3AP1Q6ZUJ8 805 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 NEK8Q86SG6 692 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 RTN4RL1Q86UN2 441 aaPredicted RBP22.78■■□□□ 1.24
CIRBP-239ENST00000592467 ARNTL2Q8WYA1 636 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 CDHR5Q9HBB8 845 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 SAMM50Q9Y512 469 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 MTCH2Q9Y6C9 303 aa22.78■■□□□ 1.24
CIRBP-239ENST00000592467 NLRC5Q86WI3 1866 aa22.77■■□□□ 1.24
CIRBP-239ENST00000592467 PRRC2BQ5JSZ5 2229 aaKnown RBP22.77■■□□□ 1.24
CIRBP-239ENST00000592467 CCDC194A0A1B0GVG4 234 aa22.77■■□□□ 1.24
CIRBP-239ENST00000592467 IGFBP4P22692 258 aa22.77■■□□□ 1.24
CIRBP-239ENST00000592467 CKAP2LQ8IYA6 745 aa22.77■■□□□ 1.24
CIRBP-239ENST00000592467 CRIPAKQ8N1N5 446 aa22.77■■□□□ 1.24
CIRBP-239ENST00000592467 RDM1Q8NG50 284 aa22.77■■□□□ 1.24
CIRBP-239ENST00000592467 CEP89Q96ST8 783 aa22.77■■□□□ 1.24
CIRBP-239ENST00000592467 RC3H2Q9HBD1 1191 aaKnown RBP22.77■■□□□ 1.24
CIRBP-239ENST00000592467 PRDM6Q9NQX0 595 aa22.77■■□□□ 1.24
CIRBP-239ENST00000592467 TCEAL9Q9UHQ7 104 aa22.77■■□□□ 1.24
CIRBP-239ENST00000592467 VAV3Q9UKW4 847 aa22.77■■□□□ 1.24
CIRBP-239ENST00000592467 LIMCH1Q9UPQ0 1083 aa22.77■■□□□ 1.24
CIRBP-239ENST00000592467 OATP04181 439 aa22.76■■□□□ 1.23
CIRBP-239ENST00000592467 RBM25P49756 843 aaKnown RBP22.76■■□□□ 1.23
CIRBP-239ENST00000592467 PRKCEQ02156 737 aa22.76■■□□□ 1.23
CIRBP-239ENST00000592467 GRB10Q13322 594 aa22.76■■□□□ 1.23
CIRBP-239ENST00000592467 TARBP2Q15633 366 aaKnown RBP22.76■■□□□ 1.23
CIRBP-239ENST00000592467 KRT40Q6A162 431 aa22.76■■□□□ 1.23
CIRBP-239ENST00000592467 TRMT1LQ7Z2T5 733 aaKnown RBP22.76■■□□□ 1.23
CIRBP-239ENST00000592467 TMEM40Q8WWA1 233 aa22.76■■□□□ 1.23
CIRBP-239ENST00000592467 HAS1Q92839 578 aa22.76■■□□□ 1.23
CIRBP-239ENST00000592467 FAM167AQ96KS9 214 aa22.76■■□□□ 1.23
CIRBP-239ENST00000592467 PADI3Q9ULW8 664 aa22.76■■□□□ 1.23
CIRBP-239ENST00000592467 RALGAPA2Q2PPJ7 1873 aa22.75■■□□□ 1.23
CIRBP-239ENST00000592467 EML1O00423 815 aa22.75■■□□□ 1.23
CIRBP-239ENST00000592467 MMP1P03956 469 aa22.75■■□□□ 1.23
CIRBP-239ENST00000592467 GCFC2P16383 781 aaKnown RBP22.75■■□□□ 1.23
CIRBP-239ENST00000592467 KRT2P35908 639 aa22.75■■□□□ 1.23
CIRBP-239ENST00000592467 MIER3Q7Z3K6 550 aa22.75■■□□□ 1.23
CIRBP-239ENST00000592467 TGS1Q96RS0 853 aaKnown RBP22.75■■□□□ 1.23
CIRBP-239ENST00000592467 TMX1Q9H3N1 280 aa22.75■■□□□ 1.23
CIRBP-239ENST00000592467 SUGCTQ9HAC7 445 aa22.75■■□□□ 1.23
CIRBP-239ENST00000592467 XIRP2A4UGR9 3374 aa22.75■■□□□ 1.23
CIRBP-239ENST00000592467 WNT7AO00755 349 aa22.74■■□□□ 1.23
CIRBP-239ENST00000592467 GPR32O75388 356 aa22.74■■□□□ 1.23
CIRBP-239ENST00000592467 UPP2O95045 317 aa22.74■■□□□ 1.23
CIRBP-239ENST00000592467 LINC00271P0C7V0 271 aa22.74■■□□□ 1.23
CIRBP-239ENST00000592467 PPP2R5CQ13362 524 aa22.74■■□□□ 1.23
CIRBP-239ENST00000592467 PPM1EQ8WY54 764 aa22.74■■□□□ 1.23
CIRBP-239ENST00000592467 FAM20AQ96MK3 541 aa22.74■■□□□ 1.23
CIRBP-239ENST00000592467 C17orf80Q9BSJ5 609 aa22.74■■□□□ 1.23
CIRBP-239ENST00000592467 ERVK-5Q9HDB9 667 aa22.74■■□□□ 1.23
CIRBP-239ENST00000592467 CEP131Q9UPN4 1083 aa22.74■■□□□ 1.23
CIRBP-239ENST00000592467 BTBD18B2RXH4 712 aa22.73■■□□□ 1.23
CIRBP-239ENST00000592467 M0QZ92 97 aa22.73■■□□□ 1.23
CIRBP-239ENST00000592467 CCDC85BQ15834 202 aaPredicted RBP22.73■■□□□ 1.23
CIRBP-239ENST00000592467 CCDC83Q8IWF9 413 aa22.73■■□□□ 1.23
CIRBP-239ENST00000592467 NIFKQ9BYG3 293 aaKnown RBP22.73■■□□□ 1.23
CIRBP-239ENST00000592467 NRBP2Q9NSY0 501 aa22.73■■□□□ 1.23
CIRBP-239ENST00000592467 NOC2LQ9Y3T9 749 aaKnown RBP22.73■■□□□ 1.23
CIRBP-239ENST00000592467 TMEM150BA6NC51 233 aa22.72■■□□□ 1.23
CIRBP-239ENST00000592467 TBX3O15119 743 aa22.72■■□□□ 1.23
CIRBP-239ENST00000592467 MAGEB2O15479 319 aa22.72■■□□□ 1.23
CIRBP-239ENST00000592467 CCNT1O60563 726 aaKnown RBP22.72■■□□□ 1.23
CIRBP-239ENST00000592467 VTNP04004 478 aa22.72■■□□□ 1.23
CIRBP-239ENST00000592467 CLCN3P51790 818 aa22.72■■□□□ 1.23
CIRBP-239ENST00000592467 SPIRE1Q08AE8 756 aa22.72■■□□□ 1.23
CIRBP-239ENST00000592467 TMEM266Q2M3C6 531 aa22.72■■□□□ 1.23
CIRBP-239ENST00000592467 POTEDQ86YR6 584 aa22.72■■□□□ 1.23
CIRBP-239ENST00000592467 DIS3L2Q8IYB7 885 aaKnown RBP22.72■■□□□ 1.23
CIRBP-239ENST00000592467 GDPD5Q8WTR4 605 aa22.72■■□□□ 1.23
CIRBP-239ENST00000592467 ZNF689Q96CS4 500 aaPredicted RBP22.72■■□□□ 1.23
CIRBP-239ENST00000592467 TSPYL2Q9H2G4 693 aaPredicted RBP22.72■■□□□ 1.23
CIRBP-239ENST00000592467 ATG2AQ2TAZ0 1938 aa22.71■■□□□ 1.23
CIRBP-239ENST00000592467 MGEA5O60502 916 aa22.71■■□□□ 1.23
CIRBP-239ENST00000592467 PAK2Q13177 524 aa22.71■■□□□ 1.23
CIRBP-239ENST00000592467 KIZQ2M2Z5 673 aa22.71■■□□□ 1.23
CIRBP-239ENST00000592467 EFCAB12Q6NXP0 572 aa22.71■■□□□ 1.23
CIRBP-239ENST00000592467 LRRC71Q8N4P6 559 aa22.71■■□□□ 1.23
CIRBP-239ENST00000592467 YME1L1Q96TA2 773 aa22.71■■□□□ 1.23
CIRBP-239ENST00000592467 NAP1L4Q99733 375 aaKnown RBP22.71■■□□□ 1.23
CIRBP-239ENST00000592467 FTHL17Q9BXU8 183 aa22.71■■□□□ 1.23
CIRBP-239ENST00000592467 ADAMTS10Q9H324 1103 aa22.71■■□□□ 1.23
CIRBP-239ENST00000592467 WRAP73Q9P2S5 460 aaPredicted RBP22.71■■□□□ 1.23
CIRBP-239ENST00000592467 MTUS1Q9ULD2 1270 aa22.71■■□□□ 1.23
CIRBP-239ENST00000592467 KIAA1671Q9BY89 1806 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms