RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 MED1Q15648 1581 aaPredicted RBP12.41□□□□□ -0.42
SEH1L-208ENST00000590843 SPDYE5A6NIY4 337 aa12.41□□□□□ -0.42
SEH1L-208ENST00000590843 OSTNP61366 133 aa12.41□□□□□ -0.42
SEH1L-208ENST00000590843 SCYL2Q6P3W7 929 aa12.41□□□□□ -0.42
SEH1L-208ENST00000590843 AFAP1L2Q8N4X5 818 aa12.41□□□□□ -0.42
SEH1L-208ENST00000590843 LUC7L2Q9Y383 392 aaKnown RBP12.41□□□□□ -0.42
SEH1L-208ENST00000590843 ZMYM2Q9UBW7 1377 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 ALDH2P05091 517 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 VCAM1P19320 739 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 RPL10AP62906 217 aaKnown RBP12.4□□□□□ -0.42
SEH1L-208ENST00000590843 ZNF543Q08ER8 600 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 UBE2SQ16763 222 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 SLITRK1Q96PX8 696 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 TRPC7Q9HCX4 862 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 PCDHB4Q9Y5E5 795 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 SNX14Q9Y5W7 946 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 TUBE1Q9UJT0 475 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 SALL1Q9NSC2 1324 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 CYP2D7A0A087X1C5 515 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 SLC26A4O43511 780 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 KDM1AO60341 852 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 IFNAR1P17181 557 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 ARL4AP40617 200 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 PNPLA4P41247 253 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 SLC12A2P55011 1212 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 CKAP4Q07065 602 aaKnown RBP12.4□□□□□ -0.42
SEH1L-208ENST00000590843 KIF5AQ12840 1032 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 KCNB1Q14721 858 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 RINT1Q6NUQ1 792 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 CCDC149Q6ZUS6 474 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 C15orf52Q6ZUT6 534 aaKnown RBP12.4□□□□□ -0.42
SEH1L-208ENST00000590843 DDX53Q86TM3 631 aaKnown RBP12.4□□□□□ -0.42
SEH1L-208ENST00000590843 SEL1LQ9UBV2 794 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 GDAQ9Y2T3 454 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 TMX2Q9Y320 296 aa12.4□□□□□ -0.42
SEH1L-208ENST00000590843 PFKFB2O60825 505 aa12.4□□□□□ -0.43
SEH1L-208ENST00000590843 PTGISQ16647 500 aa12.4□□□□□ -0.43
SEH1L-208ENST00000590843 RAB42Q8N4Z0 105 aa12.4□□□□□ -0.43
SEH1L-208ENST00000590843 KCTD17Q8N5Z5 321 aa12.4□□□□□ -0.43
SEH1L-208ENST00000590843 MTMR14Q8NCE2 650 aa12.4□□□□□ -0.43
SEH1L-208ENST00000590843 DDX27Q96GQ7 796 aaKnown RBP12.4□□□□□ -0.43
SEH1L-208ENST00000590843 TINF2Q9BSI4 451 aa12.4□□□□□ -0.43
SEH1L-208ENST00000590843 POLR3FQ9H1D9 316 aaPredicted RBP12.4□□□□□ -0.43
SEH1L-208ENST00000590843 IGFLR1Q9H665 355 aa12.4□□□□□ -0.43
SEH1L-208ENST00000590843 DNA2P51530 1060 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 KCNH2Q12809 1159 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 DDX42Q86XP3 938 aaKnown RBP eCLIP12.39□□□□□ -0.43
SEH1L-208ENST00000590843 MLKLQ8NB16 471 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 ZNF558Q96NG5 402 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 IDI2Q9BXS1 227 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 TSGA10Q9BZW7 698 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 NCOA5Q9HCD5 579 aaKnown RBP12.39□□□□□ -0.43
SEH1L-208ENST00000590843 DSEQ9UL01 958 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 WDR19Q8NEZ3 1342 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 STAT1P42224 750 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 RIPOR3Q96MK2 946 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 NXF1Q9UBU9 619 aaKnown RBP12.39□□□□□ -0.43
SEH1L-208ENST00000590843 SH2B2O14492 632 aaPredicted RBP12.39□□□□□ -0.43
SEH1L-208ENST00000590843 SMARCA1P28370 1054 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 MRE11P49959 708 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 SV2CQ496J9 727 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 TTC23LQ6PF05 361 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 APBB2Q92870 758 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 COG7P83436 770 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 TMTC3Q6ZXV5 915 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 LCMT1Q9UIC8 334 aa12.39□□□□□ -0.43
SEH1L-208ENST00000590843 TBKBP1A7MCY6 615 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 PRKCBP05771 671 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 UBASH3AP57075 661 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 IRAK1BP1Q5VVH5 260 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 PADI6Q6TGC4 694 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 TOGARAM2Q6ZUX3 1019 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 ZNF557Q8N988 423 aaPredicted RBP12.38□□□□□ -0.43
SEH1L-208ENST00000590843 DYDC1Q8WWB3 177 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 HEXIM2Q96MH2 286 aaKnown RBP12.38□□□□□ -0.43
SEH1L-208ENST00000590843 ADAMTSL3P82987 1691 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 KRT86O43790 486 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 RLBP1P12271 317 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 CBX1P83916 185 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 CD302Q8IX05 232 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 SCFD1Q8WVM8 642 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 KIF12Q96FN5 646 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 ARID3AQ99856 593 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 RIC8AQ9NPQ8 531 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 STAP1Q9ULZ2 295 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 GOLGA6L7A0A1B0GV03 622 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 MOXD2PA6NHM9 499 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 CYP2C8P10632 490 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 NSFP46459 744 aaKnown RBP12.38□□□□□ -0.43
SEH1L-208ENST00000590843 FPGSQ05932 587 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 RNF149Q8NC42 400 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 TRPM4Q8TD43 1214 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 P2RX7Q99572 595 aaKnown RBP12.38□□□□□ -0.43
SEH1L-208ENST00000590843 SPZ1Q9BXG8 430 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 GPR161Q8N6U8 529 aaKnown RBP12.38□□□□□ -0.43
SEH1L-208ENST00000590843 SEC62Q99442 399 aaKnown RBP12.38□□□□□ -0.43
SEH1L-208ENST00000590843 MMTAG2Q9BU76 263 aaKnown RBP12.38□□□□□ -0.43
SEH1L-208ENST00000590843 NRBP1Q9UHY1 535 aa12.38□□□□□ -0.43
SEH1L-208ENST00000590843 MAGED2Q9UNF1 606 aaPredicted RBP12.38□□□□□ -0.43
SEH1L-208ENST00000590843 PTPRAP18433 802 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms