RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 SLC9A2Q9UBY0 812 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 CACNA1HO95180 2353 aa17.28■□□□□ 0.36
SF3A2-204ENST00000589118 DDX39AO00148 427 aaKnown RBP17.28■□□□□ 0.36
SF3A2-204ENST00000589118 FSCN2O14926 492 aa17.28■□□□□ 0.36
SF3A2-204ENST00000589118 GSPT1P15170 499 aaKnown RBP17.28■□□□□ 0.36
SF3A2-204ENST00000589118 ATF7P17544 494 aaPredicted RBP17.28■□□□□ 0.36
SF3A2-204ENST00000589118 KLRC1P26715 233 aa17.28■□□□□ 0.36
SF3A2-204ENST00000589118 ACTR2P61160 394 aa17.28■□□□□ 0.36
SF3A2-204ENST00000589118 PKN1Q16512 942 aa17.28■□□□□ 0.36
SF3A2-204ENST00000589118 LRRC55Q6ZSA7 311 aa17.28■□□□□ 0.36
SF3A2-204ENST00000589118 MB21D2Q8IYB1 491 aaPredicted RBP17.28■□□□□ 0.36
SF3A2-204ENST00000589118 KREMEN2Q8NCW0 462 aa17.28■□□□□ 0.36
SF3A2-204ENST00000589118 RIPOR3Q96MK2 946 aa17.28■□□□□ 0.36
SF3A2-204ENST00000589118 AZI2Q9H6S1 392 aa17.28■□□□□ 0.36
SF3A2-204ENST00000589118 JPH1Q9HDC5 661 aaPredicted RBP17.28■□□□□ 0.36
SF3A2-204ENST00000589118 KCNH7Q9NS40 1196 aa17.28■□□□□ 0.36
SF3A2-204ENST00000589118 SEC63Q9UGP8 760 aaKnown RBP17.28■□□□□ 0.36
SF3A2-204ENST00000589118 ST3GAL5Q9UNP4 418 aa17.28■□□□□ 0.36
SF3A2-204ENST00000589118 SQORQ9Y6N5 450 aa17.28■□□□□ 0.36
SF3A2-204ENST00000589118 DMDP11532 3685 aa17.27■□□□□ 0.36
SF3A2-204ENST00000589118 SMIM35A0A1B0GVV1 85 aa17.27■□□□□ 0.36
SF3A2-204ENST00000589118 RPS6KA5O75582 802 aa17.27■□□□□ 0.36
SF3A2-204ENST00000589118 PDE4AP27815 886 aa17.27■□□□□ 0.36
SF3A2-204ENST00000589118 STAT5BP51692 787 aa17.27■□□□□ 0.36
SF3A2-204ENST00000589118 ITGB3BPQ13352 177 aaPredicted RBP17.27■□□□□ 0.36
SF3A2-204ENST00000589118 TRMT1LQ7Z2T5 733 aaKnown RBP17.27■□□□□ 0.36
SF3A2-204ENST00000589118 TMEM105Q8N8V8 129 aa17.27■□□□□ 0.36
SF3A2-204ENST00000589118 CTCFLQ8NI51 663 aaPredicted RBP17.27■□□□□ 0.36
SF3A2-204ENST00000589118 CDHR1Q96JP9 859 aa17.27■□□□□ 0.36
SF3A2-204ENST00000589118 TCF25Q9BQ70 676 aa17.27■□□□□ 0.36
SF3A2-204ENST00000589118 U3KPZ7 1027 aaPredicted RBP17.27■□□□□ 0.36
SF3A2-204ENST00000589118 DENND3A2RUS2 1198 aa17.26■□□□□ 0.35
SF3A2-204ENST00000589118 C9IYK1 514 aa17.26■□□□□ 0.35
SF3A2-204ENST00000589118 BRD1O95696 1058 aa17.26■□□□□ 0.35
SF3A2-204ENST00000589118 KIAA0319LQ8IZA0 1049 aa17.26■□□□□ 0.35
SF3A2-204ENST00000589118 RGS18Q9NS28 235 aa17.26■□□□□ 0.35
SF3A2-204ENST00000589118 KDM3AQ9Y4C1 1321 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 SPDYE3A6NKU9 549 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 C2CD4DB7Z1M9 353 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 CCNE2O96020 404 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 ASGR2P07307 311 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 UBE3AQ05086 875 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 SART3Q15020 963 aaKnown RBP17.25■□□□□ 0.35
SF3A2-204ENST00000589118 KIZQ2M2Z5 673 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 PLPPR4Q7Z2D5 763 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 C12orf76Q8N812 135 aaPredicted RBP17.25■□□□□ 0.35
SF3A2-204ENST00000589118 ZNF668Q96K58 619 aaPredicted RBP17.25■□□□□ 0.35
SF3A2-204ENST00000589118 OSMRQ99650 979 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 MXRA8Q9BRK3 442 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 POMKQ9H5K3 350 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 ENTPD7Q9NQZ7 604 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 AAASQ9NRG9 546 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 RNF19AQ9NV58 838 aa17.25■□□□□ 0.35
SF3A2-204ENST00000589118 GALR2O43603 387 aaPredicted RBP17.24■□□□□ 0.35
SF3A2-204ENST00000589118 ATP4AP20648 1035 aa17.24■□□□□ 0.35
SF3A2-204ENST00000589118 CHMLP26374 656 aa17.24■□□□□ 0.35
SF3A2-204ENST00000589118 TMEM184AQ6ZMB5 413 aa17.24■□□□□ 0.35
SF3A2-204ENST00000589118 SLC24A5Q71RS6 500 aa17.24■□□□□ 0.35
SF3A2-204ENST00000589118 HEATR3Q7Z4Q2 680 aa17.24■□□□□ 0.35
SF3A2-204ENST00000589118 FAM228AQ86W67 206 aa17.24■□□□□ 0.35
SF3A2-204ENST00000589118 EXOC6Q8TAG9 804 aa17.24■□□□□ 0.35
SF3A2-204ENST00000589118 MRPS27Q92552 414 aaKnown RBP17.24■□□□□ 0.35
SF3A2-204ENST00000589118 YTHDC1Q96MU7 727 aaKnown RBP17.24■□□□□ 0.35
SF3A2-204ENST00000589118 LRRC2Q9BYS8 371 aa17.24■□□□□ 0.35
SF3A2-204ENST00000589118 PTPRZ1P23471 2315 aaPredicted RBP17.24■□□□□ 0.35
SF3A2-204ENST00000589118 PRC1O43663 620 aa17.23■□□□□ 0.35
SF3A2-204ENST00000589118 DDAH1O94760 285 aa17.23■□□□□ 0.35
SF3A2-204ENST00000589118 VTNP04004 478 aa17.23■□□□□ 0.35
SF3A2-204ENST00000589118 TYW1BQ6NUM6 668 aa17.23■□□□□ 0.35
SF3A2-204ENST00000589118 NFXL1Q6ZNB6 911 aa17.23■□□□□ 0.35
SF3A2-204ENST00000589118 CCDC60Q8IWA6 550 aaPredicted RBP17.23■□□□□ 0.35
SF3A2-204ENST00000589118 NME8Q8N427 588 aa17.23■□□□□ 0.35
SF3A2-204ENST00000589118 CASD1Q96PB1 797 aa17.23■□□□□ 0.35
SF3A2-204ENST00000589118 CDCA3Q99618 268 aaPredicted RBP17.23■□□□□ 0.35
SF3A2-204ENST00000589118 SDF4Q9BRK5 362 aa17.23■□□□□ 0.35
SF3A2-204ENST00000589118 ATP6V0A4Q9HBG4 840 aa17.23■□□□□ 0.35
SF3A2-204ENST00000589118 AGO4Q9HCK5 861 aaKnown RBP17.23■□□□□ 0.35
SF3A2-204ENST00000589118 PRR23AA6NEV1 266 aa17.22■□□□□ 0.35
SF3A2-204ENST00000589118 ZBTB42B2RXF5 422 aa17.22■□□□□ 0.35
SF3A2-204ENST00000589118 NT5C1B-RDH14C9J2C7 533 aa17.22■□□□□ 0.35
SF3A2-204ENST00000589118 BACH1O14867 736 aa17.22■□□□□ 0.35
SF3A2-204ENST00000589118 ATG7O95352 703 aa17.22■□□□□ 0.35
SF3A2-204ENST00000589118 KIF5BP33176 963 aa17.22■□□□□ 0.35
SF3A2-204ENST00000589118 DSC3Q14574 896 aa17.22■□□□□ 0.35
SF3A2-204ENST00000589118 TTC22Q5TAA0 569 aa17.22■□□□□ 0.35
SF3A2-204ENST00000589118 KCNT2Q6UVM3 1135 aa17.22■□□□□ 0.35
SF3A2-204ENST00000589118 TMC7Q7Z402 723 aa17.22■□□□□ 0.35
SF3A2-204ENST00000589118 FRMD5Q7Z6J6 570 aa17.22■□□□□ 0.35
SF3A2-204ENST00000589118 MAP3K14Q99558 947 aa17.22■□□□□ 0.35
SF3A2-204ENST00000589118 NFASCO94856 1347 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 SH2B2O14492 632 aaPredicted RBP17.21■□□□□ 0.35
SF3A2-204ENST00000589118 MAFGO15525 162 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 SMARCA1P28370 1054 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 CA8P35219 290 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 FAM189BP81408 668 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 PLCB3Q01970 1234 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 WWC2Q6AWC2 1192 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 SWSAP1Q6NVH7 229 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 ABHD15Q6UXT9 468 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 RNF169Q8NCN4 708 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms