RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 PPP4R3AQ6IN85 833 aa22.04■■□□□ 1.12
TPM4-208ENST00000588410 KIAA0319LQ8IZA0 1049 aa22.04■■□□□ 1.12
TPM4-208ENST00000588410 ETNPPLQ8TBG4 499 aa22.04■■□□□ 1.12
TPM4-208ENST00000588410 FTHL17Q9BXU8 183 aa22.04■■□□□ 1.12
TPM4-208ENST00000588410 AGO3Q9H9G7 860 aaKnown RBP22.04■■□□□ 1.12
TPM4-208ENST00000588410 COL6A3P12111 3177 aa22.04■■□□□ 1.12
TPM4-208ENST00000588410 TET1Q8NFU7 2136 aa22.04■■□□□ 1.12
TPM4-208ENST00000588410 EPOPA6NHQ4 379 aa22.03■■□□□ 1.12
TPM4-208ENST00000588410 ENPP3O14638 875 aa22.03■■□□□ 1.12
TPM4-208ENST00000588410 SLC37A4O43826 429 aa22.03■■□□□ 1.12
TPM4-208ENST00000588410 JAK2O60674 1132 aa22.03■■□□□ 1.12
TPM4-208ENST00000588410 FOSBP53539 338 aa22.03■■□□□ 1.12
TPM4-208ENST00000588410 FAM20AQ96MK3 541 aa22.03■■□□□ 1.12
TPM4-208ENST00000588410 KDM3AQ9Y4C1 1321 aa22.03■■□□□ 1.12
TPM4-208ENST00000588410 DLL1O00548 723 aa22.02■■□□□ 1.12
TPM4-208ENST00000588410 ZNF862O60290 1169 aa22.02■■□□□ 1.12
TPM4-208ENST00000588410 TMOD1P28289 359 aa22.02■■□□□ 1.12
TPM4-208ENST00000588410 ERVK-21P61565 698 aa22.02■■□□□ 1.12
TPM4-208ENST00000588410 UGCGQ16739 394 aa22.02■■□□□ 1.12
TPM4-208ENST00000588410 ODR4Q5SWX8 454 aa22.02■■□□□ 1.12
TPM4-208ENST00000588410 SPRED2Q7Z698 418 aa22.02■■□□□ 1.12
TPM4-208ENST00000588410 MAP7D2Q96T17 732 aa22.02■■□□□ 1.12
TPM4-208ENST00000588410 TSPYL2Q9H2G4 693 aaPredicted RBP22.02■■□□□ 1.12
TPM4-208ENST00000588410 PADI3Q9ULW8 664 aa22.02■■□□□ 1.12
TPM4-208ENST00000588410 MMP1P03956 469 aa22.01■■□□□ 1.11
TPM4-208ENST00000588410 NFX1Q12986 1120 aaKnown RBP22.01■■□□□ 1.11
TPM4-208ENST00000588410 NR5A1Q13285 461 aa22.01■■□□□ 1.11
TPM4-208ENST00000588410 GRB10Q13322 594 aa22.01■■□□□ 1.11
TPM4-208ENST00000588410 CCDC83Q8IWF9 413 aa22.01■■□□□ 1.11
TPM4-208ENST00000588410 SP7Q8TDD2 431 aaPredicted RBP22.01■■□□□ 1.11
TPM4-208ENST00000588410 ZSCAN31Q96LW9 406 aaPredicted RBP22.01■■□□□ 1.11
TPM4-208ENST00000588410 PPP1R16BQ96T49 567 aa22.01■■□□□ 1.11
TPM4-208ENST00000588410 MTCH2Q9Y6C9 303 aa22.01■■□□□ 1.11
TPM4-208ENST00000588410 RPS6KA5O75582 802 aa22■■□□□ 1.11
TPM4-208ENST00000588410 BAG4O95429 457 aaKnown RBP22■■□□□ 1.11
TPM4-208ENST00000588410 POU3F3P20264 500 aaPredicted RBP22■■□□□ 1.11
TPM4-208ENST00000588410 SKIV2LQ15477 1246 aaKnown RBP22■■□□□ 1.11
TPM4-208ENST00000588410 KIZQ2M2Z5 673 aa22■■□□□ 1.11
TPM4-208ENST00000588410 TMEM266Q2M3C6 531 aa22■■□□□ 1.11
TPM4-208ENST00000588410 XKR3Q5GH77 459 aa22■■□□□ 1.11
TPM4-208ENST00000588410 KRT40Q6A162 431 aa22■■□□□ 1.11
TPM4-208ENST00000588410 EFCAB12Q6NXP0 572 aa22■■□□□ 1.11
TPM4-208ENST00000588410 B3GNT9Q6UX72 402 aa22■■□□□ 1.11
TPM4-208ENST00000588410 SAMD11Q96NU1 681 aa22■■□□□ 1.11
TPM4-208ENST00000588410 KCNMB3Q9NPA1 279 aa22■■□□□ 1.11
TPM4-208ENST00000588410 SEPT9Q9UHD8 586 aaPredicted RBP22■■□□□ 1.11
TPM4-208ENST00000588410 AKT3Q9Y243 479 aa22■■□□□ 1.11
TPM4-208ENST00000588410 TBX3O15119 743 aa21.99■■□□□ 1.11
TPM4-208ENST00000588410 VTNP04004 478 aa21.99■■□□□ 1.11
TPM4-208ENST00000588410 CLCN3P51790 818 aa21.99■■□□□ 1.11
TPM4-208ENST00000588410 CRYBB1P53674 252 aaPredicted RBP21.99■■□□□ 1.11
TPM4-208ENST00000588410 TBC1D8BQ0IIM8 1120 aa21.99■■□□□ 1.11
TPM4-208ENST00000588410 SAFBQ15424 915 aaKnown RBP eCLIP21.99■■□□□ 1.11
TPM4-208ENST00000588410 EARS2Q5JPH6 523 aaKnown RBP21.99■■□□□ 1.11
TPM4-208ENST00000588410 FAM43BQ6ZT52 329 aaPredicted RBP21.99■■□□□ 1.11
TPM4-208ENST00000588410 DIS3L2Q8IYB7 885 aaKnown RBP21.99■■□□□ 1.11
TPM4-208ENST00000588410 FBXO22Q8NEZ5 403 aa21.99■■□□□ 1.11
TPM4-208ENST00000588410 GDPD5Q8WTR4 605 aa21.99■■□□□ 1.11
TPM4-208ENST00000588410 LLPHQ9BRT6 129 aaKnown RBP21.99■■□□□ 1.11
TPM4-208ENST00000588410 C17orf80Q9BSJ5 609 aa21.99■■□□□ 1.11
TPM4-208ENST00000588410 SUGCTQ9HAC7 445 aa21.99■■□□□ 1.11
TPM4-208ENST00000588410 UPF2Q9HAU5 1272 aaKnown RBP21.99■■□□□ 1.11
TPM4-208ENST00000588410 CDH23Q9H251 3354 aa21.99■■□□□ 1.11
TPM4-208ENST00000588410 DDX11L8A8MPP1 907 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 BTBD18B2RXH4 712 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 GPR182O15218 404 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 DKC1O60832 514 aaKnown RBP eCLIP21.98■■□□□ 1.11
TPM4-208ENST00000588410 PSMC5P62195 406 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 ST3GAL1Q11201 340 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 PPP2R5CQ13362 524 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 SLFN12Q8IYM2 578 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 ZNF710Q8N1W2 664 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 LRRC71Q8N4P6 559 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 FIBCD1Q8N539 461 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 BANK1Q8NDB2 785 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 TNFRSF25Q93038 417 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 OSMRQ99650 979 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 CDHR5Q9HBB8 845 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 PRDM6Q9NQX0 595 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 SH2B1Q9NRF2 756 aaPredicted RBP21.98■■□□□ 1.11
TPM4-208ENST00000588410 THEGQ9P2T0 379 aa21.98■■□□□ 1.11
TPM4-208ENST00000588410 NOC2LQ9Y3T9 749 aaKnown RBP21.98■■□□□ 1.11
TPM4-208ENST00000588410 FAM205CA6NFA0 338 aa21.97■■□□□ 1.11
TPM4-208ENST00000588410 STAG3L1P0CL83 205 aa21.97■■□□□ 1.11
TPM4-208ENST00000588410 MTERF2Q49AM1 385 aa21.97■■□□□ 1.11
TPM4-208ENST00000588410 POTEDQ86YR6 584 aa21.97■■□□□ 1.11
TPM4-208ENST00000588410 LINC01599Q8WXQ3 324 aa21.97■■□□□ 1.11
TPM4-208ENST00000588410 SCLT1Q96NL6 688 aa21.97■■□□□ 1.11
TPM4-208ENST00000588410 KIF2CQ99661 725 aa21.97■■□□□ 1.11
TPM4-208ENST00000588410 NIFKQ9BYG3 293 aaKnown RBP21.97■■□□□ 1.11
TPM4-208ENST00000588410 ERVK-5Q9HDB9 667 aa21.97■■□□□ 1.11
TPM4-208ENST00000588410 LMCD1Q9NZU5 365 aa21.97■■□□□ 1.11
TPM4-208ENST00000588410 VAV3Q9UKW4 847 aa21.97■■□□□ 1.11
TPM4-208ENST00000588410 LRFN2Q9ULH4 789 aa21.97■■□□□ 1.11
TPM4-208ENST00000588410 ST3GAL5Q9UNP4 418 aa21.97■■□□□ 1.11
TPM4-208ENST00000588410 DENND3A2RUS2 1198 aa21.96■■□□□ 1.11
TPM4-208ENST00000588410 EML1O00423 815 aa21.96■■□□□ 1.11
TPM4-208ENST00000588410 LPXNO60711 386 aa21.96■■□□□ 1.11
TPM4-208ENST00000588410 IBSPP21815 317 aaPredicted RBP21.96■■□□□ 1.11
TPM4-208ENST00000588410 QARSP47897 775 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms