RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-218	ENST00000588344	PCDHA2	Q9Y5H9	948 aa		10.13	□□□□□ -0.79
CIRBP-218	ENST00000588344	KIAA1217	Q5T5P2	1943 aa		10.13	□□□□□ -0.79
CIRBP-218	ENST00000588344	MCM3AP	O60318	1980 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	SMIM35	A0A1B0GVV1	85 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	PITPNM1	O00562	1244 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	KIAA0355	O15063	1070 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	MED24	O75448	989 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	DGAT1	O75907	488 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	STBD1	O95210	358 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	MLLT1	Q03111	559 aa	Predicted RBP	10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	TBC1D8B	Q0IIM8	1120 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	ADAL	Q6DHV7	355 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	MTHFD1L	Q6UB35	978 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	CCDC73	Q6ZRK6	1079 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	ANO5	Q75V66	913 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	RASSF8	Q8NHQ8	419 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	TCP11	Q8WWU5	503 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	TRPV6	Q9H1D0	765 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	KCND2	Q9NZV8	630 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	KCNG1	Q9UIX4	513 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	PCDHA7	Q9UN72	937 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	KIAA1024	Q9UPX6	916 aa		10.12	□□□□□ -0.79
CIRBP-218	ENST00000588344	MYH7B	A7E2Y1	1941 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	GOLGA6L4	A6NEF3	574 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	ASAP2	O43150	1006 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	TREH	O43280	583 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	MAF	O75444	373 aa	Predicted RBP	10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	CAPN15	O75808	1086 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	EYA4	O95677	639 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	TIMP1	P01033	207 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	CYP2C9	P11712	490 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	CMA1	P23946	247 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	RARRES1	P49788	294 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	POLG	P54098	1239 aa	Predicted RBP	10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	IGBP1	P78318	339 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	RBL2	Q08999	1139 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	XKR9	Q5GH70	373 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	MARCH8	Q5T0T0	291 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	IER5	Q5VY09	327 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	RRAGB	Q5VZM2	374 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	MCPH1	Q8NEM0	835 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	CLIC6	Q96NY7	704 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	MMTAG2	Q9BU76	263 aa	Known RBP	10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	TIPIN	Q9BVW5	301 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	HIPK3	Q9H422	1215 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	CUEDC2	Q9H467	287 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	DHX33	Q9H6R0	707 aa	Known RBP	10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	TRMT13	Q9NUP7	481 aa	Known RBP	10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	DDX19A	Q9NUU7	478 aa	Known RBP	10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	WRAP73	Q9P2S5	460 aa	Predicted RBP	10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	TBX21	Q9UL17	535 aa		10.11	□□□□□ -0.79
CIRBP-218	ENST00000588344	KIAA0100	Q14667	2235 aa	Known RBP	10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	IGKV6-21	A0A0C4DH24	114 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344		A0A1W2PQ27	194 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344		A0A1W2PQ64	194 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344		A0A1W2PQD8	194 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	ARHGEF35	A5YM69	484 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	PP2D1	A8MPX8	630 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	ZBTB42	B2RXF5	422 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344		M0QZ92	97 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	C22orf31	O95567	290 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	RAG1	P15918	1043 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	CDC25A	P30304	524 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	RFC2	P35250	354 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	GRIN1	Q05586	938 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	ZRSR1	Q15695	479 aa	Known RBP	10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	MTERF2	Q49AM1	385 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	TMEM119	Q4V9L6	283 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	EFCAB12	Q6NXP0	572 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	POTEG	Q6S5H5	508 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	C7orf61	Q8IZ16	206 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	TMEM199	Q8N511	208 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	METTL13	Q8N6R0	699 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	SYT2	Q8N9I0	419 aa	Predicted RBP	10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	IQUB	Q8NA54	791 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	USP38	Q8NB14	1042 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	PIGO	Q8TEQ8	1089 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	SYMPK	Q92797	1274 aa	Known RBP	10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	CCDC34	Q96HJ3	373 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	EPSTI1	Q96J88	318 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	CEP89	Q96ST8	783 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	MAP7D2	Q96T17	732 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	LBHD1	Q9BQE6	289 aa	Predicted RBP	10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	LRRC27	Q9C0I9	530 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	PDLIM7	Q9NR12	457 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	STK17A	Q9UEE5	414 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	USP25	Q9UHP3	1055 aa		10.1	□□□□□ -0.79
CIRBP-218	ENST00000588344	DNAH12	Q6ZR08	3092 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	MKI67	P46013	3256 aa	Known RBP	10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	CKB	P12277	381 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	SELP	P16109	830 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	CYP11B2	P19099	503 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	THPO	P40225	353 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	NPEPPS	P55786	919 aa		10.09	□□□□□ -0.79
CIRBP-218	ENST00000588344	ZNF200	P98182	395 aa	Predicted RBP	10.09	□□□□□ -0.79

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