RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 KRT40Q6A162 431 aa18.88■□□□□ 0.61
CSNK1D-225ENST00000584913 LINC01465Q8N7H1 131 aa18.88■□□□□ 0.61
CSNK1D-225ENST00000584913 OXER1Q8TDS5 423 aa18.88■□□□□ 0.61
CSNK1D-225ENST00000584913 TRAPPC12Q8WVT3 735 aa18.88■□□□□ 0.61
CSNK1D-225ENST00000584913 SAMD11Q96NU1 681 aa18.88■□□□□ 0.61
CSNK1D-225ENST00000584913 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 SLC37A4O43826 429 aa18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 ZNF862O60290 1169 aa18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 CCNT1O60563 726 aaKnown RBP18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 JAK2O60674 1132 aa18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 TMOD1P28289 359 aa18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 CDC42EP1Q00587 391 aa18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 PRKCEQ02156 737 aa18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 TAP1Q03518 808 aa18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 SAFBQ15424 915 aaKnown RBP eCLIP18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 XKR3Q5GH77 459 aa18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 DIS3L2Q8IYB7 885 aaKnown RBP18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 KIAA0319LQ8IZA0 1049 aa18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 NIFKQ9BYG3 293 aaKnown RBP18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 FAM49AQ9H0Q0 323 aaPredicted RBP18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 PRDM12Q9H4Q4 367 aa18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 RNF216Q9NWF9 866 aaPredicted RBP18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 VAV3Q9UKW4 847 aa18.87■□□□□ 0.61
CSNK1D-225ENST00000584913 BAG4O95429 457 aaKnown RBP18.86■□□□□ 0.61
CSNK1D-225ENST00000584913 MYOGP15173 224 aa18.86■□□□□ 0.61
CSNK1D-225ENST00000584913 MCM2P49736 904 aa18.86■□□□□ 0.61
CSNK1D-225ENST00000584913 NR5A1Q13285 461 aa18.86■□□□□ 0.61
CSNK1D-225ENST00000584913 TARBP2Q15633 366 aaKnown RBP18.86■□□□□ 0.61
CSNK1D-225ENST00000584913 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.86■□□□□ 0.61
CSNK1D-225ENST00000584913 MYOCDQ8IZQ8 938 aa18.86■□□□□ 0.61
CSNK1D-225ENST00000584913 GJB4Q9NTQ9 266 aa18.86■□□□□ 0.61
CSNK1D-225ENST00000584913 LMCD1Q9NZU5 365 aa18.86■□□□□ 0.61
CSNK1D-225ENST00000584913 KIF3AQ9Y496 699 aa18.86■□□□□ 0.61
CSNK1D-225ENST00000584913 CHMP2AO43633 222 aa18.85■□□□□ 0.61
CSNK1D-225ENST00000584913 ERVK-21P61565 698 aa18.85■□□□□ 0.61
CSNK1D-225ENST00000584913 PSMC5P62195 406 aa18.85■□□□□ 0.61
CSNK1D-225ENST00000584913 PAK2Q13177 524 aa18.85■□□□□ 0.61
CSNK1D-225ENST00000584913 CCDC83Q8IWF9 413 aa18.85■□□□□ 0.61
CSNK1D-225ENST00000584913 EXOC8Q8IYI6 725 aa18.85■□□□□ 0.61
CSNK1D-225ENST00000584913 HAS1Q92839 578 aa18.85■□□□□ 0.61
CSNK1D-225ENST00000584913 TGS1Q96RS0 853 aaKnown RBP18.85■□□□□ 0.61
CSNK1D-225ENST00000584913 MAP7D2Q96T17 732 aa18.85■□□□□ 0.61
CSNK1D-225ENST00000584913 JPH2Q9BR39 696 aaPredicted RBP18.85■□□□□ 0.61
CSNK1D-225ENST00000584913 FOXP1Q9H334 677 aaPredicted RBP18.85■□□□□ 0.61
CSNK1D-225ENST00000584913 BTBD18B2RXH4 712 aa18.84■□□□□ 0.61
CSNK1D-225ENST00000584913 CRYBB1P53674 252 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-225ENST00000584913 SPIRE1Q08AE8 756 aa18.84■□□□□ 0.61
CSNK1D-225ENST00000584913 EPHA7Q15375 998 aa18.84■□□□□ 0.61
CSNK1D-225ENST00000584913 UGCGQ16739 394 aa18.84■□□□□ 0.61
CSNK1D-225ENST00000584913 EARS2Q5JPH6 523 aaKnown RBP18.84■□□□□ 0.61
CSNK1D-225ENST00000584913 FBXO18Q8NFZ0 1043 aa18.84■□□□□ 0.61
CSNK1D-225ENST00000584913 NEK9Q8TD19 979 aa18.84■□□□□ 0.61
CSNK1D-225ENST00000584913 C8orf76Q96K31 380 aa18.84■□□□□ 0.61
CSNK1D-225ENST00000584913 OSBPL7Q9BZF2 842 aa18.84■□□□□ 0.61
CSNK1D-225ENST00000584913 TSPYL2Q9H2G4 693 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-225ENST00000584913 AGO3Q9H9G7 860 aaKnown RBP18.84■□□□□ 0.61
CSNK1D-225ENST00000584913 CHD7Q9P2D1 2997 aa18.84■□□□□ 0.61
CSNK1D-225ENST00000584913 IGKV6-21A0A0C4DH24 114 aa18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 LINC01553A4QN01 128 aa18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 GPR182O15218 404 aa18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 P4HBP07237 508 aaKnown RBP18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 QARSP47897 775 aaKnown RBP18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 TBC1D8BQ0IIM8 1120 aa18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 POTEDQ86YR6 584 aa18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 SLC17A8Q8NDX2 589 aa18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 TBC1D32Q96NH3 1257 aa18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 UIMC1Q96RL1 719 aa18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 RC3H2Q9HBD1 1191 aaKnown RBP18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 PADI3Q9ULW8 664 aa18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 RWDD3Q9Y3V2 267 aa18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 RBM19Q9Y4C8 960 aaKnown RBP18.83■□□□□ 0.6
CSNK1D-225ENST00000584913 ENPP3O14638 875 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 GTPBP6O43824 516 aaPredicted RBP18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 GAS2O43903 313 aaKnown RBP18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 NEMFO60524 1076 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 STBD1O95210 358 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 CD52P31358 61 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 TRAPPC10P48553 1259 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 ADGRE1Q14246 886 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 C4orf19Q8IY42 314 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 CRIPAKQ8N1N5 446 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 FAM184AQ8NB25 1140 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 ZBTB10Q96DT7 871 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 CEP89Q96ST8 783 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 YME1L1Q96TA2 773 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 ERVK-5Q9HDB9 667 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 C1orf112Q9NSG2 853 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 RALGAPA2Q2PPJ7 1873 aa18.82■□□□□ 0.6
CSNK1D-225ENST00000584913 LCHNA4D1U4 455 aa18.81■□□□□ 0.6
CSNK1D-225ENST00000584913 MARCH6O60337 910 aa18.81■□□□□ 0.6
CSNK1D-225ENST00000584913 GPR32O75388 356 aa18.81■□□□□ 0.6
CSNK1D-225ENST00000584913 RPS6KA5O75582 802 aa18.81■□□□□ 0.6
CSNK1D-225ENST00000584913 ARHGEF15O94989 841 aa18.81■□□□□ 0.6
CSNK1D-225ENST00000584913 LYPLA2O95372 231 aa18.81■□□□□ 0.6
CSNK1D-225ENST00000584913 STAG3L1P0CL83 205 aa18.81■□□□□ 0.6
CSNK1D-225ENST00000584913 EFCAB12Q6NXP0 572 aa18.81■□□□□ 0.6
CSNK1D-225ENST00000584913 NPAS4Q8IUM7 802 aa18.81■□□□□ 0.6
CSNK1D-225ENST00000584913 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.81■□□□□ 0.6
CSNK1D-225ENST00000584913 GJA10Q969M2 543 aa18.81■□□□□ 0.6
CSNK1D-225ENST00000584913 SEPT9Q9UHD8 586 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms