RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ECE1P42892 770 aa6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 FOXE3Q13461 319 aa6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 SERINC3Q13530 473 aa6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 PCOLCEQ15113 449 aa6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 KANK2Q63ZY3 851 aa6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 IGFL4Q6B9Z1 124 aa6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 CXXC5Q7LFL8 322 aaKnown RBP6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 FILIP1Q7Z7B0 1213 aa6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 ASB15Q8WXK1 588 aa6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 EXTL1Q92935 676 aa6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 DEPDC7Q96QD5 511 aa6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 BTBD2Q9BX70 525 aa6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 FBXO10Q9UK96 956 aa6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 RASSF10A6NK89 507 aa6.31□□□□□ -1.4
SMCHD1-208ENST00000583344 NFYCQ13952 458 aa6.31□□□□□ -1.4
SMCHD1-208ENST00000583344 EIF4HQ15056 248 aaKnown RBP6.31□□□□□ -1.4
SMCHD1-208ENST00000583344 POLNQ7Z5Q5 900 aa6.31□□□□□ -1.4
SMCHD1-208ENST00000583344 OR14K1Q8NGZ2 314 aa6.31□□□□□ -1.4
SMCHD1-208ENST00000583344 SLC7A14Q8TBB6 771 aa6.31□□□□□ -1.4
SMCHD1-208ENST00000583344 OR10A5Q9H207 317 aa6.31□□□□□ -1.4
SMCHD1-208ENST00000583344 SNTG2Q9NY99 539 aa6.31□□□□□ -1.4
SMCHD1-208ENST00000583344 PUF60Q9UHX1 559 aaKnown RBP6.31□□□□□ -1.4
SMCHD1-208ENST00000583344 A0A0G2JNJ9 132 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 PRAMEF22A3QJZ6 481 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 MRE11P49959 708 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 STAT5BP51692 787 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 DGCR2P98153 550 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 MOGSQ13724 837 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 LONRF2Q1L5Z9 754 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 MIIPQ5JXC2 388 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 TMEM200BQ69YZ2 307 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 USP30Q70CQ3 517 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 ZNF808Q8N4W9 903 aaPredicted RBP6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 GSTCDQ8NEC7 633 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 WDR48Q8TAF3 677 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 ZNF503Q96F45 646 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 SCLYQ96I15 445 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 GBP4Q96PP9 640 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 Q9UFV3 132 aa6.3□□□□□ -1.4
SMCHD1-208ENST00000583344 PLSCR1O15162 318 aa6.29□□□□□ -1.4
SMCHD1-208ENST00000583344 RANGAP1P46060 587 aaPredicted RBP6.29□□□□□ -1.4
SMCHD1-208ENST00000583344 TRIM68Q6AZZ1 485 aa6.29□□□□□ -1.4
SMCHD1-208ENST00000583344 MAMDC4Q6UXC1 1216 aa6.29□□□□□ -1.4
SMCHD1-208ENST00000583344 RTKN2Q8IZC4 609 aa6.29□□□□□ -1.4
SMCHD1-208ENST00000583344 HIPK4Q8NE63 616 aa6.29□□□□□ -1.4
SMCHD1-208ENST00000583344 CELF4Q9BZC1 486 aaKnown RBP6.29□□□□□ -1.4
SMCHD1-208ENST00000583344 CSRNP2Q9H175 543 aa6.29□□□□□ -1.4
SMCHD1-208ENST00000583344 OR10A2Q9H208 303 aa6.29□□□□□ -1.4
SMCHD1-208ENST00000583344 KCNH7Q9NS40 1196 aa6.29□□□□□ -1.4
SMCHD1-208ENST00000583344 SFMBT1Q9UHJ3 866 aa6.29□□□□□ -1.4
SMCHD1-208ENST00000583344 FOXP2O15409 715 aa6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 MSX2P35548 267 aaPredicted RBP6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 MEOX1P50221 254 aa6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 PTH1RQ03431 593 aa6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 FOXL1Q12952 345 aa6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 GRAMD4Q6IC98 578 aa6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 ABHD17CQ6PCB6 329 aa6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 OVCH1Q7RTY7 1134 aa6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 BRAPQ7Z569 592 aa6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 FAM89AQ96GI7 184 aa6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 MAGEB10Q96LZ2 347 aaPredicted RBP6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 DNAJC7Q99615 494 aa6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 MENTQ9BUN1 341 aa6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 FAM184BQ9ULE4 1060 aa6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 B3GALT1Q9Y5Z6 326 aa6.28□□□□□ -1.4
SMCHD1-208ENST00000583344 EFCAB14O75071 495 aa6.27□□□□□ -1.41
SMCHD1-208ENST00000583344 ZNF202O95125 648 aa6.27□□□□□ -1.41
SMCHD1-208ENST00000583344 RPS19P39019 145 aaKnown RBP6.27□□□□□ -1.41
SMCHD1-208ENST00000583344 TMEM132BQ14DG7 1078 aa6.27□□□□□ -1.41
SMCHD1-208ENST00000583344 TRIM61Q5EBN2 209 aa6.27□□□□□ -1.41
SMCHD1-208ENST00000583344 FGD2Q7Z6J4 655 aa6.27□□□□□ -1.41
SMCHD1-208ENST00000583344 C1orf210Q8IVY1 113 aa6.27□□□□□ -1.41
SMCHD1-208ENST00000583344 GPR135Q8IZ08 494 aa6.27□□□□□ -1.41
SMCHD1-208ENST00000583344 DLG3Q92796 817 aa6.27□□□□□ -1.41
SMCHD1-208ENST00000583344 ERCC4Q92889 916 aaPredicted RBP6.27□□□□□ -1.41
SMCHD1-208ENST00000583344 HIRIP3Q9BW71 556 aaPredicted RBP6.27□□□□□ -1.41
SMCHD1-208ENST00000583344 PODXL2Q9NZ53 605 aa6.27□□□□□ -1.41
SMCHD1-208ENST00000583344 SLC12A8A0AV02 714 aa6.26□□□□□ -1.41
SMCHD1-208ENST00000583344 C1SP09871 688 aa6.26□□□□□ -1.41
SMCHD1-208ENST00000583344 HGFACQ04756 655 aa6.26□□□□□ -1.41
SMCHD1-208ENST00000583344 FHL2Q14192 279 aa6.26□□□□□ -1.41
SMCHD1-208ENST00000583344 CATSPEREQ5SY80 951 aa6.26□□□□□ -1.41
SMCHD1-208ENST00000583344 IGSF22Q8N9C0 903 aa6.26□□□□□ -1.41
SMCHD1-208ENST00000583344 IL17DQ8TAD2 202 aa6.26□□□□□ -1.41
SMCHD1-208ENST00000583344 TMEM176AQ96HP8 235 aa6.26□□□□□ -1.41
SMCHD1-208ENST00000583344 SRPK1Q96SB4 655 aaKnown RBP6.26□□□□□ -1.41
SMCHD1-208ENST00000583344 TLR9Q9NR96 1032 aa6.26□□□□□ -1.41
SMCHD1-208ENST00000583344 PLA2G3Q9NZ20 509 aa6.26□□□□□ -1.41
SMCHD1-208ENST00000583344 ASB1Q9Y576 335 aa6.26□□□□□ -1.41
SMCHD1-208ENST00000583344 TCRBV16S1A1N1A0A5B0 115 aa6.25□□□□□ -1.41
SMCHD1-208ENST00000583344 OVOL3O00110 214 aa6.25□□□□□ -1.41
SMCHD1-208ENST00000583344 KCNA6P17658 529 aa6.25□□□□□ -1.41
SMCHD1-208ENST00000583344 ACRV1P26436 265 aa6.25□□□□□ -1.41
SMCHD1-208ENST00000583344 SDHAP31040 664 aa6.25□□□□□ -1.41
SMCHD1-208ENST00000583344 LSM12Q3MHD2 195 aaKnown RBP6.25□□□□□ -1.41
SMCHD1-208ENST00000583344 ZC3H12BQ5HYM0 836 aaKnown RBP6.25□□□□□ -1.41
SMCHD1-208ENST00000583344 CRB2Q5IJ48 1285 aa6.25□□□□□ -1.41
SMCHD1-208ENST00000583344 LRP10Q7Z4F1 713 aa6.25□□□□□ -1.41
SMCHD1-208ENST00000583344 BCL6BQ8N143 479 aaPredicted RBP6.25□□□□□ -1.41
SMCHD1-208ENST00000583344 SLITRK6Q9H5Y7 841 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms