RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 BMP8AQ7Z5Y6 402 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 RNF135Q8IUD6 432 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 KIAA0319LQ8IZA0 1049 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 SPPL3Q8TCT6 385 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 ATP8B4Q8TF62 1192 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 TCEANC2Q96MN5 208 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 TMX1Q9H3N1 280 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 TMEM260Q9NX78 707 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 MRPL42Q9Y6G3 142 aaKnown RBP12.07□□□□□ -0.48
RFFL-209ENST00000581265 IGLV3-22A0A075B6J6 115 aa12.06□□□□□ -0.48
RFFL-209ENST00000581265 KLF18A0A0U1RQI7 1052 aa12.06□□□□□ -0.48
RFFL-209ENST00000581265 CCDC196A0A1B0GTZ2 297 aa12.06□□□□□ -0.48
RFFL-209ENST00000581265 ITGB1P05556 798 aa12.06□□□□□ -0.48
RFFL-209ENST00000581265 SCG2P13521 617 aa12.06□□□□□ -0.48
RFFL-209ENST00000581265 DNAJB1P25685 340 aa12.06□□□□□ -0.48
RFFL-209ENST00000581265 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
RFFL-209ENST00000581265 CLUL1Q15846 466 aa12.06□□□□□ -0.48
RFFL-209ENST00000581265 PFKFB3Q16875 520 aaPredicted RBP12.06□□□□□ -0.48
RFFL-209ENST00000581265 ZNF484Q5JVG2 852 aa12.06□□□□□ -0.48
RFFL-209ENST00000581265 FAM160B1Q5W0V3 765 aa12.06□□□□□ -0.48
RFFL-209ENST00000581265 MCTP2Q6DN12 878 aa12.06□□□□□ -0.48
RFFL-209ENST00000581265 TRIM67Q6ZTA4 783 aa12.06□□□□□ -0.48
RFFL-209ENST00000581265 PLA2G4DQ86XP0 818 aa12.06□□□□□ -0.48
RFFL-209ENST00000581265 ZMYND12Q9H0C1 365 aa12.06□□□□□ -0.48
RFFL-209ENST00000581265 COL1A2P08123 1366 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 ESYT2A0FGR8 921 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 GOLGA8AA7E2F4 631 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 GOLGA8BA8MQT2 603 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 ZBTB42B2RXF5 422 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 IPO5O00410 1097 aaKnown RBP12.05□□□□□ -0.48
RFFL-209ENST00000581265 BACH1O14867 736 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 MBTPS2O43462 519 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 RPS6KA5O75582 802 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 ATP4AP20648 1035 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 GTF2F1P35269 517 aaKnown RBP eCLIP12.05□□□□□ -0.48
RFFL-209ENST00000581265 SARSP49591 514 aaKnown RBP12.05□□□□□ -0.48
RFFL-209ENST00000581265 TCF15Q12870 199 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 NFX1Q12986 1120 aaKnown RBP12.05□□□□□ -0.48
RFFL-209ENST00000581265 TMEM266Q2M3C6 531 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 ODR4Q5SWX8 454 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 JAKMIP3Q5VZ66 844 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 SWSAP1Q6NVH7 229 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 MIS18BP1Q6P0N0 1132 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 PDXDC2PQ6P474 469 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 ERMP1Q7Z2K6 904 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 CCDC60Q8IWA6 550 aaPredicted RBP12.05□□□□□ -0.48
RFFL-209ENST00000581265 FBXL6Q8N531 539 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 KLHL23Q8NBE8 558 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 KCNB2Q92953 911 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 PPP2R3CQ969Q6 453 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 CDHR5Q9HBB8 845 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 ERVK-5Q9HDB9 667 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 ZNF302Q9NR11 478 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 RGS18Q9NS28 235 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 TBC1D22BQ9NU19 505 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
RFFL-209ENST00000581265 NOC2LQ9Y3T9 749 aaKnown RBP12.05□□□□□ -0.48
RFFL-209ENST00000581265 PCDHB7Q9Y5E2 793 aa12.05□□□□□ -0.48
RFFL-209ENST00000581265 MAFBQ9Y5Q3 323 aaPredicted RBP12.05□□□□□ -0.48
RFFL-209ENST00000581265 DDX39AO00148 427 aaKnown RBP12.04□□□□□ -0.48
RFFL-209ENST00000581265 GPR182O15218 404 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 LINC01565O15544 149 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 TBX10O75333 385 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 EYA4O95677 639 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 SMAD4Q13485 552 aaKnown RBP12.04□□□□□ -0.48
RFFL-209ENST00000581265 PAN2Q504Q3 1202 aaKnown RBP12.04□□□□□ -0.48
RFFL-209ENST00000581265 ZNF746Q6NUN9 644 aaPredicted RBP12.04□□□□□ -0.48
RFFL-209ENST00000581265 SLC24A5Q71RS6 500 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 CENPQQ7L2Z9 268 aaPredicted RBP12.04□□□□□ -0.48
RFFL-209ENST00000581265 FBXL16Q8N461 479 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 EFHBQ8N7U6 833 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 POF1BQ8WVV4 589 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 TMEM40Q8WWA1 233 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
RFFL-209ENST00000581265 MSLNLQ96KJ4 702 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 IGFLR1Q9H665 355 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 C6orf50Q9HD87 102 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 C1orf112Q9NSG2 853 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 LRFN2Q9ULH4 789 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 ST3GAL5Q9UNP4 418 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 GINS2Q9Y248 185 aa12.04□□□□□ -0.48
RFFL-209ENST00000581265 C9IYK1 514 aa12.03□□□□□ -0.48
RFFL-209ENST00000581265 PRPF3O43395 683 aaKnown RBP12.03□□□□□ -0.48
RFFL-209ENST00000581265 MGEA5O60502 916 aa12.03□□□□□ -0.48
RFFL-209ENST00000581265 CDC45O75419 566 aa12.03□□□□□ -0.48
RFFL-209ENST00000581265 GNA11P29992 359 aa12.03□□□□□ -0.48
RFFL-209ENST00000581265 CIITAP33076 1130 aa12.03□□□□□ -0.48
RFFL-209ENST00000581265 GATMP50440 423 aa12.03□□□□□ -0.48
RFFL-209ENST00000581265 METAP2P50579 478 aaKnown RBP eCLIP12.03□□□□□ -0.48
RFFL-209ENST00000581265 CRYBB1P53674 252 aaPredicted RBP12.03□□□□□ -0.48
RFFL-209ENST00000581265 FAM189BP81408 668 aa12.03□□□□□ -0.48
RFFL-209ENST00000581265 FGD1P98174 961 aa12.03□□□□□ -0.48
RFFL-209ENST00000581265 UBE3AQ05086 875 aa12.03□□□□□ -0.48
RFFL-209ENST00000581265 SKAP1Q86WV1 359 aa12.03□□□□□ -0.48
RFFL-209ENST00000581265 SMAP1Q8IYB5 467 aaPredicted RBP12.03□□□□□ -0.48
RFFL-209ENST00000581265 REXO1Q8N1G1 1221 aaKnown RBP12.03□□□□□ -0.48
RFFL-209ENST00000581265 CCDC12Q8WUD4 166 aaPredicted RBP12.03□□□□□ -0.48
RFFL-209ENST00000581265 ADAM2Q99965 735 aa12.03□□□□□ -0.48
RFFL-209ENST00000581265 ZNF577Q9BSK1 485 aa12.03□□□□□ -0.48
RFFL-209ENST00000581265 CLEC1BQ9P126 229 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 254.6 ms