RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 PCDHGC5Q9Y5F6 944 aa9.76□□□□□ -0.85
CASC3-206ENST00000579238 COL1A2P08123 1366 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 KIAA1671Q9BY89 1806 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 DENND3A2RUS2 1198 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 TBKBP1A7MCY6 615 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 C9IYK1 514 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 MEIS1O00470 390 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 SLC27A2O14975 620 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 PER2O15055 1255 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 GPR182O15218 404 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 FGF18O76093 207 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 IBSPP21815 317 aaPredicted RBP9.75□□□□□ -0.85
CASC3-206ENST00000579238 NAPAP54920 295 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 ITGB3BPQ13352 177 aaPredicted RBP9.75□□□□□ -0.85
CASC3-206ENST00000579238 COL9A3Q14050 684 aaPredicted RBP9.75□□□□□ -0.85
CASC3-206ENST00000579238 DUSP6Q16828 381 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 IER5LQ5T953 404 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 FAM160B1Q5W0V3 765 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 WWC2Q6AWC2 1192 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 PPP1R18Q6NYC8 613 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 ABHD15Q6UXT9 468 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 SYNE3Q6ZMZ3 975 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 SLC24A5Q71RS6 500 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 NIPA1Q7RTP0 329 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 SGMS1Q86VZ5 419 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 MICU3Q86XE3 530 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 KIAA0319LQ8IZA0 1049 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 PRSS33Q8NF86 280 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 SUSD6Q92537 303 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 ANO3Q9BYT9 981 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 LSG1Q9H089 658 aaKnown RBP9.75□□□□□ -0.85
CASC3-206ENST00000579238 RGS18Q9NS28 235 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 ST3GAL5Q9UNP4 418 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 GINS2Q9Y248 185 aa9.75□□□□□ -0.85
CASC3-206ENST00000579238 NOC2LQ9Y3T9 749 aaKnown RBP9.75□□□□□ -0.85
CASC3-206ENST00000579238 BACH1O14867 736 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 FSCN2O14926 492 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 CCNE2O96020 404 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 LAG3P18627 525 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 SREBF1P36956 1147 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 ADCY7P51828 1080 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 FAM189BP81408 668 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 SIGLEC14Q08ET2 396 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 AP3B2Q13367 1082 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 NECTIN1Q15223 517 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 ZNF484Q5JVG2 852 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 FAM102BQ5T8I3 360 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 CREB3L3Q68CJ9 461 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 TYW1BQ6NUM6 668 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 PDXDC2PQ6P474 469 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 TMEM184AQ6ZMB5 413 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 THNSL1Q8IYQ7 743 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 FBXL6Q8N531 539 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 COLGALT1Q8NBJ5 622 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 VN1R2Q8NFZ6 395 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 TMEM40Q8WWA1 233 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 PGBD1Q96JS3 809 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 RPGRIP1Q96KN7 1286 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 NEK1Q96PY6 1258 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 LRRC2Q9BYS8 371 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 GLT8D2Q9H1C3 349 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 ELAC1Q9H777 363 aaKnown RBP9.74□□□□□ -0.85
CASC3-206ENST00000579238 CDHR5Q9HBB8 845 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 ATP6V0A4Q9HBG4 840 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 TYW1Q9NV66 732 aaKnown RBP9.74□□□□□ -0.85
CASC3-206ENST00000579238 RBM28Q9NW13 759 aaKnown RBP9.74□□□□□ -0.85
CASC3-206ENST00000579238 TMEM161AQ9NX61 479 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 TMEM260Q9NX78 707 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 LZTS1Q9Y250 596 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 CNTNAP5Q8WYK1 1306 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 LOXHD1Q8IVV2 1947 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 TRIOO75962 3097 aa9.74□□□□□ -0.85
CASC3-206ENST00000579238 PLXNA4Q9HCM2 1894 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 SMCO2A6NFE2 343 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 ZBTB42B2RXF5 422 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 hCG_1984214I3L0E3 225 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 DDX39AO00148 427 aaKnown RBP9.73□□□□□ -0.85
CASC3-206ENST00000579238 SRGAP2BP0DMP2 458 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 ZNF76P36508 570 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 CLK2P49760 499 aaKnown RBP9.73□□□□□ -0.85
CASC3-206ENST00000579238 CRYBB1P53674 252 aaPredicted RBP9.73□□□□□ -0.85
CASC3-206ENST00000579238 ERVFC1P60507 584 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 RBM10P98175 930 aaKnown RBP9.73□□□□□ -0.85
CASC3-206ENST00000579238 PLCB3Q01970 1234 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 KCNC3Q14003 757 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 MIS18BP1Q6P0N0 1132 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 APOA5Q6Q788 366 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 FAM228AQ86W67 206 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 CCDC60Q8IWA6 550 aaPredicted RBP9.73□□□□□ -0.85
CASC3-206ENST00000579238 ZNF713Q8N859 430 aaPredicted RBP9.73□□□□□ -0.85
CASC3-206ENST00000579238 RASGRP4Q8TDF6 673 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 MRPS27Q92552 414 aaKnown RBP9.73□□□□□ -0.85
CASC3-206ENST00000579238 ASIC4Q96FT7 647 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 PHOX2BQ99453 314 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 S1PR5Q9H228 398 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 CWH43Q9H720 699 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 ZNF302Q9NR11 478 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 HCSTQ9UBK5 93 aa9.73□□□□□ -0.85
CASC3-206ENST00000579238 PUF60Q9UHX1 559 aaKnown RBP9.73□□□□□ -0.85
CASC3-206ENST00000579238 FNDC1Q4ZHG4 1894 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms