RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 APBB2Q92870 758 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 CCDC43Q96MW1 224 aaKnown RBP7.36□□□□□ -1.23
TRAF4-213ENST00000578917 MBOAT7Q96N66 472 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 PPP1R16BQ96T49 567 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 CELF4Q9BZC1 486 aaKnown RBP7.36□□□□□ -1.23
TRAF4-213ENST00000578917 TTC12Q9H892 705 aaPredicted RBP7.36□□□□□ -1.23
TRAF4-213ENST00000578917 MTMR10Q9NXD2 777 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 SEPT9Q9UHD8 586 aaPredicted RBP7.36□□□□□ -1.23
TRAF4-213ENST00000578917 PCDHA11Q9Y5I1 949 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 TRPV2Q9Y5S1 764 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 CDY2AQ9Y6F7 541 aa7.36□□□□□ -1.23
TRAF4-213ENST00000578917 LRRC37A2A6NM11 1700 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 COL1A2P08123 1366 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 TMEM265A0A087WTH1 108 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 DENND3A2RUS2 1198 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 P4HBP07237 508 aaKnown RBP7.35□□□□□ -1.23
TRAF4-213ENST00000578917 CA3P07451 260 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 HSP90AA1P07900 732 aaKnown RBP7.35□□□□□ -1.23
TRAF4-213ENST00000578917 ATP4AP20648 1035 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 IGFBP4P22692 258 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 GJB2P29033 226 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 CD52P31358 61 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 ST3GAL1Q11201 340 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 PAK2Q13177 524 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 PPP2R5CQ13362 524 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 LPIN1Q14693 890 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 GPNMBQ14956 572 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 EPHA7Q15375 998 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 UGCGQ16739 394 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 KIZQ2M2Z5 673 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 ODR4Q5SWX8 454 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 TSHZ1Q6ZSZ6 1077 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 TMCO2Q7Z6W1 182 aaPredicted RBP7.35□□□□□ -1.23
TRAF4-213ENST00000578917 EXOC8Q8IYI6 725 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 LRRC71Q8N4P6 559 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 USP38Q8NB14 1042 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 NLRP7Q8WX94 980 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 SLC7A3Q8WY07 619 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 HAS1Q92839 578 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 VWCEQ96DN2 955 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 CEP170P1Q96L14 293 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 YME1L1Q96TA2 773 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 GAS2L1Q99501 681 aaPredicted RBP7.35□□□□□ -1.23
TRAF4-213ENST00000578917 CDX2Q99626 313 aaPredicted RBP7.35□□□□□ -1.23
TRAF4-213ENST00000578917 RAD9AQ99638 391 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 JPH2Q9BR39 696 aaPredicted RBP7.35□□□□□ -1.23
TRAF4-213ENST00000578917 SH2D3AQ9BRG2 576 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 ZSWIM4Q9H7M6 989 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 CERS4Q9HA82 394 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 KCNMB3Q9NPA1 279 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 INSL6Q9Y581 213 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 ALPK3Q96L96 1907 aa7.35□□□□□ -1.23
TRAF4-213ENST00000578917 SZT2Q5T011 3432 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 EML1O00423 815 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 GPR182O15218 404 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 ZNF862O60290 1169 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 RPS6KA5O75582 802 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 C22orf31O95567 290 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 VTNP04004 478 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 FOSL2P15408 326 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 YWHABP31946 246 aaKnown RBP7.34□□□□□ -1.23
TRAF4-213ENST00000578917 TECP42680 631 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 TRAPPC10P48553 1259 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 CLCN3P51790 818 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 CRYBB1P53674 252 aaPredicted RBP7.34□□□□□ -1.23
TRAF4-213ENST00000578917 POLGP54098 1239 aaPredicted RBP7.34□□□□□ -1.23
TRAF4-213ENST00000578917 NLRP11P59045 1033 aaKnown RBP7.34□□□□□ -1.23
TRAF4-213ENST00000578917 DEFB103AP81534 67 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 CDC42EP1Q00587 391 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 CYP4A11Q02928 519 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 CTTNQ14247 550 aaKnown RBP7.34□□□□□ -1.23
TRAF4-213ENST00000578917 GRIN2CQ14957 1233 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 TMEM266Q2M3C6 531 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 XKR9Q5GH70 373 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 FBXO47Q5MNV8 452 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 TTC38Q5R3I4 469 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 TRAF7Q6Q0C0 670 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.34□□□□□ -1.23
TRAF4-213ENST00000578917 ZNF710Q8N1W2 664 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 ERMNQ8TAM6 284 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 PPM1EQ8WY54 764 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 MYLIPQ8WY64 445 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 ARNTL2Q8WYA1 636 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 TNFRSF25Q93038 417 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 DYDC2Q96IM9 177 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 EIF2AK1Q9BQI3 630 aaKnown RBP7.34□□□□□ -1.23
TRAF4-213ENST00000578917 FTHL17Q9BXU8 183 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 NIFKQ9BYG3 293 aaKnown RBP7.34□□□□□ -1.23
TRAF4-213ENST00000578917 TTYH1Q9H313 450 aaPredicted RBP7.34□□□□□ -1.23
TRAF4-213ENST00000578917 PRDM12Q9H4Q4 367 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 RNF216Q9NWF9 866 aaPredicted RBP7.34□□□□□ -1.23
TRAF4-213ENST00000578917 RGL1Q9NZL6 768 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 SUCLA2Q9P2R7 463 aaPredicted RBP7.34□□□□□ -1.23
TRAF4-213ENST00000578917 VAV3Q9UKW4 847 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 MTUS1Q9ULD2 1270 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 LRFN2Q9ULH4 789 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 PADI3Q9ULW8 664 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 YBX2Q9Y2T7 364 aaKnown RBP7.34□□□□□ -1.23
TRAF4-213ENST00000578917 SQORQ9Y6N5 450 aa7.34□□□□□ -1.23
TRAF4-213ENST00000578917 SCN10AQ9Y5Y9 1956 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms