RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 H0Y858 1186 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 DDX3XO00571 662 aaKnown RBP eCLIP3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 GPR39O43194 453 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 RAB11FIP3O75154 756 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 KNG1P01042 644 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 PRLP01236 227 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 COL6A1P12109 1028 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 APEX1P27695 318 aaKnown RBP3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 IL13P35225 146 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 ID4P47928 161 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 MLLT6P55198 1093 aaPredicted RBP3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 SESN3P58005 492 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 IL13RA1P78552 427 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 AMPD3Q01432 767 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 SLC6A3Q01959 620 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 FAPQ12884 760 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 FAM26FQ5R3K3 315 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 PHF19Q5T6S3 580 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 BROXQ5VW32 411 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 RNF219Q5W0B1 726 aaPredicted RBP3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 SLFN12LQ6IEE8 588 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 TIGD7Q6NT04 549 aaPredicted RBP3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 TRMT10BQ6PF06 316 aaKnown RBP3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 LRSAM1Q6UWE0 723 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 RASSF3Q86WH2 238 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 DDX42Q86XP3 938 aaKnown RBP eCLIP3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 SPATS2Q86XZ4 545 aaKnown RBP3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 PHYKPLQ8IUZ5 450 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 C7orf31Q8N865 590 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 TP53I13Q8NBR0 393 aaPredicted RBP3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 WDR66Q8TBY9 1149 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 ZCCHC14Q8WYQ9 949 aaKnown RBP3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 MAML3Q96JK9 1138 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 TUBGCP5Q96RT8 1024 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 AMNQ9BXJ7 453 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 OR10A5Q9H207 317 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 L2HGDHQ9H9P8 463 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 FTSJ1Q9UET6 329 aa3.09□□□□□ -1.91
PTP4A1-204ENST00000578299 MAFGO15525 162 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 MAFO75444 373 aaPredicted RBP3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 ZSCAN22P10073 491 aaPredicted RBP3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 CDK11BP21127 795 aaKnown RBP3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 SLURP1P55000 103 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 BCAR1P56945 870 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 TMPRSS15P98073 1019 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 MAP3K12Q12852 859 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 NFATC3Q12968 1075 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 VMACQ2NL98 169 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 KRTAP19-4Q3LI73 84 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 WDR72Q3MJ13 1102 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 PRAMEF9Q5VWM5 478 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 KANK2Q63ZY3 851 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 IQSEC1Q6DN90 963 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 FRMD7Q6ZUT3 714 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 ESPNLQ6ZVH7 1005 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 HDGFL2Q7Z4V5 671 aaPredicted RBP3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 NECAB2Q7Z6G3 386 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 C1QL4Q86Z23 238 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 SIAH1Q8IUQ4 282 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 ADAMTS17Q8TE56 1095 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 RTF1Q92541 710 aaKnown RBP3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 RPGRQ92834 1020 aaKnown RBP3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 GPATCH3Q96I76 525 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 YTHDC1Q96MU7 727 aaKnown RBP3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 FAM126AQ9BYI3 521 aaPredicted RBP3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 KRTAP4-8Q9BYQ9 185 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 ZDHHC5Q9C0B5 715 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 TMEM168Q9H0V1 697 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 GOLGA2P5Q9HBQ8 144 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 MSRAQ9UJ68 235 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 FBXO10Q9UK96 956 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 NOP58Q9Y2X3 529 aaKnown RBP3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 NOC2LQ9Y3T9 749 aaKnown RBP3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 PHLDB1Q86UU1 1377 aa3.08□□□□□ -1.92
PTP4A1-204ENST00000578299 hCG_2014768A0A024R1R8 64 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 A0A1B0GTL3 188 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 C9orf118A6NHY6 69 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 ALG1L2C9J202 215 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 KDM1AO60341 852 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 CUTAO60888 179 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 KLHL18O94889 574 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 PRPF6O94906 941 aaKnown RBP3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 CYP1A1P04798 512 aaPredicted RBP3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 POLD1P28340 1107 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 KCNC1P48547 511 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 RGS3P49796 1198 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 ANAPC15P60006 121 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 CD83Q01151 205 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 ADCY2Q08462 1091 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 MYBPC3Q14896 1274 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 RGL3Q3MIN7 710 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 MCTP2Q6DN12 878 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 KIAA1841Q6NSI8 718 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 LHFPL2Q6ZUX7 228 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 OTOP2Q7RTS6 562 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 KANSL1Q7Z3B3 1105 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 FAM124AQ86V42 546 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 ZNF761Q86XN6 746 aaPredicted RBP3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 REXO1L1PQ8IX06 675 aa3.07□□□□□ -1.92
PTP4A1-204ENST00000578299 SP8Q8IXZ3 490 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms