RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 DUSP6Q16828 381 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 KLHL23Q8NBE8 558 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 POF1BQ8WVV4 589 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 MYL10Q9BUA6 226 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 BARHL2Q9NY43 387 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 TELO2Q9Y4R8 837 aa12.79□□□□□ -0.36
SMARCE1-214ENST00000578112 BAZ2BQ9UIF8 2168 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 CCDC196A0A1B0GTZ2 297 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 RPS6KA5O75582 802 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 HOXB8P17481 243 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 WWC2Q6AWC2 1192 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 FAM177A1Q8N128 213 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 PIBF1Q8WXW3 757 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 SUSD6Q92537 303 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 FAM49AQ9H0Q0 323 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 TMX1Q9H3N1 280 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 NGRNQ9NPE2 291 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 ZNF302Q9NR11 478 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 CLEC1BQ9P126 229 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 C9IYK1 514 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 IGBP1P78318 339 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 FUT2Q10981 343 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 RTN1Q16799 776 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 APOA5Q6Q788 366 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 TRIM67Q6ZTA4 783 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 NEK1Q96PY6 1258 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 TMEM117Q9H0C3 514 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 PLXNA4Q9HCM2 1894 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 TLR9Q9NR96 1032 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 STK39Q9UEW8 545 aa12.78□□□□□ -0.36
SMARCE1-214ENST00000578112 TRANK1O15050 2925 aa12.77□□□□□ -0.36
SMARCE1-214ENST00000578112 LOXHD1Q8IVV2 1947 aa12.77□□□□□ -0.36
SMARCE1-214ENST00000578112 ZXDAP98168 799 aa12.77□□□□□ -0.36
SMARCE1-214ENST00000578112 DSC3Q14574 896 aa12.77□□□□□ -0.36
SMARCE1-214ENST00000578112 CRYGNQ8WXF5 182 aa12.77□□□□□ -0.36
SMARCE1-214ENST00000578112 FBXL18Q96ME1 805 aa12.77□□□□□ -0.36
SMARCE1-214ENST00000578112 ATP6V0A4Q9HBG4 840 aa12.77□□□□□ -0.36
SMARCE1-214ENST00000578112 PUF60Q9UHX1 559 aaKnown RBP12.77□□□□□ -0.36
SMARCE1-214ENST00000578112 MAFBQ9Y5Q3 323 aaPredicted RBP12.77□□□□□ -0.36
SMARCE1-214ENST00000578112 ZBTB43O43298 467 aa12.77□□□□□ -0.37
SMARCE1-214ENST00000578112 KLRC1P26715 233 aa12.77□□□□□ -0.37
SMARCE1-214ENST00000578112 MRE11P49959 708 aa12.77□□□□□ -0.37
SMARCE1-214ENST00000578112 EXOSC10Q01780 885 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-214ENST00000578112 ITGB3BPQ13352 177 aaPredicted RBP12.77□□□□□ -0.37
SMARCE1-214ENST00000578112 DHX32Q7L7V1 743 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-214ENST00000578112 FBXL16Q8N461 479 aa12.77□□□□□ -0.37
SMARCE1-214ENST00000578112 COLGALT1Q8NBJ5 622 aa12.77□□□□□ -0.37
SMARCE1-214ENST00000578112 MRPS27Q92552 414 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-214ENST00000578112 TLE6Q9H808 572 aa12.77□□□□□ -0.37
SMARCE1-214ENST00000578112 ALG13Q9NP73 1137 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-214ENST00000578112 SUPT16HQ9Y5B9 1047 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-214ENST00000578112 KMT2EQ8IZD2 1858 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 DENND3A2RUS2 1198 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 SMCO2A6NFE2 343 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 TMEM221A6NGB7 291 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 M0R296 226 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 PSAPP07602 524 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 CIITAP33076 1130 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 ZNF76P36508 570 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 DLX2Q07687 328 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 SIGLEC14Q08ET2 396 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 ALYREFQ86V81 257 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 KIAA0319LQ8IZA0 1049 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 RDM1Q8NG50 284 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 BICD2Q8TD16 824 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 NECTIN4Q96NY8 510 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 UIMC1Q96RL1 719 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 ARP10275 920 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 BMS1Q14692 1282 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 TPRNQ4KMQ1 711 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 PLA2G4DQ86XP0 818 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 SUGP1Q8IWZ8 645 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 LRRC43Q8N309 656 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 IGFLR1Q9H665 355 aa12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 USP15Q9Y4E8 981 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-214ENST00000578112 BACH1O14867 736 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 FGF18O76093 207 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 C22orf31O95567 290 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 DNAJB1P25685 340 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 TMOD1P28289 359 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 GNA11P29992 359 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 NRIP1P48552 1158 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 KCNC3Q14003 757 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 GIT2Q14161 759 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 PFKFB3Q16875 520 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 BMP2KLQ5H9B9 411 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 PDXDC2PQ6P474 469 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 HFE2Q6ZVN8 426 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 MICU3Q86XE3 530 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 CASP10Q92851 521 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 MRPL9Q9BYD2 267 aaKnown RBP12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 C22orf23Q9BZE7 217 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 ZMYND12Q9H0C1 365 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 C6orf50Q9HD87 102 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 MUTYHQ9UIF7 546 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 ST3GAL5Q9UNP4 418 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 NOC2LQ9Y3T9 749 aaKnown RBP12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 NR2E1Q9Y466 385 aa12.75□□□□□ -0.37
SMARCE1-214ENST00000578112 IGLV3-22A0A075B6J6 115 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms