RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 CENPPQ6IPU0 288 aa20.55■□□□□ 0.88
PRKCA-203ENST00000578063 TTI2Q6NXR4 508 aa20.55■□□□□ 0.88
PRKCA-203ENST00000578063 NOC3LQ8WTT2 800 aaKnown RBP20.55■□□□□ 0.88
PRKCA-203ENST00000578063 CEP170P1Q96L14 293 aa20.55■□□□□ 0.88
PRKCA-203ENST00000578063 TRIM47Q96LD4 638 aa20.55■□□□□ 0.88
PRKCA-203ENST00000578063 AZI2Q9H6S1 392 aa20.55■□□□□ 0.88
PRKCA-203ENST00000578063 TRIM49BA6NDI0 452 aa20.54■□□□□ 0.88
PRKCA-203ENST00000578063 HIP1RO75146 1068 aa20.54■□□□□ 0.88
PRKCA-203ENST00000578063 GH1P01241 217 aa20.54■□□□□ 0.88
PRKCA-203ENST00000578063 OATP04181 439 aa20.54■□□□□ 0.88
PRKCA-203ENST00000578063 CDK11BP21127 795 aaKnown RBP20.54■□□□□ 0.88
PRKCA-203ENST00000578063 CDC25BP30305 580 aa20.54■□□□□ 0.88
PRKCA-203ENST00000578063 STAT5BP51692 787 aa20.54■□□□□ 0.88
PRKCA-203ENST00000578063 FCGRTP55899 365 aa20.54■□□□□ 0.88
PRKCA-203ENST00000578063 LRRC63Q05C16 580 aa20.54■□□□□ 0.88
PRKCA-203ENST00000578063 OLFML2BQ68BL8 750 aa20.54■□□□□ 0.88
PRKCA-203ENST00000578063 MYCT1Q8N699 235 aa20.54■□□□□ 0.88
PRKCA-203ENST00000578063 EMID1Q96A84 441 aaPredicted RBP20.54■□□□□ 0.88
PRKCA-203ENST00000578063 DRC1Q96MC2 740 aa20.54■□□□□ 0.88
PRKCA-203ENST00000578063 PCYT2Q99447 389 aa20.54■□□□□ 0.88
PRKCA-203ENST00000578063 SAMSN1Q9NSI8 373 aaKnown RBP20.54■□□□□ 0.88
PRKCA-203ENST00000578063 TBC1D7Q9P0N9 293 aa20.54■□□□□ 0.88
PRKCA-203ENST00000578063 EMSYQ7Z589 1322 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 TMEM150BA6NC51 233 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 CBFA2T2O43439 604 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 LGR5O75473 907 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 SERPINC1P01008 464 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 PMS1P54277 932 aaKnown RBP20.53■□□□□ 0.88
PRKCA-203ENST00000578063 NPEPPSP55786 919 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 SPAG1Q07617 926 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 ARHGAP1Q07960 439 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 MAPK7Q13164 816 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 ACVR2BQ13705 512 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 LRRC41Q15345 812 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 HSDL1Q3SXM5 330 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 COPS5Q92905 334 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 FAM167AQ96KS9 214 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 MRPL44Q9H9J2 332 aaKnown RBP20.53■□□□□ 0.88
PRKCA-203ENST00000578063 CYP26B1Q9NR63 512 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 GJD2Q9UKL4 321 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 NKRFO15226 690 aaKnown RBP eCLIP20.53■□□□□ 0.88
PRKCA-203ENST00000578063 DGAT1O75907 488 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 ADCYAP1R1P41586 468 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 STXBP4Q6ZWJ1 553 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 EPM2AIP1Q7L775 607 aaPredicted RBP20.53■□□□□ 0.88
PRKCA-203ENST00000578063 DAW1Q8N136 415 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 GLIS3Q8NEA6 775 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 SCFD1Q8WVM8 642 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 TSG101Q99816 390 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 FGFBP2Q9BYJ0 223 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 SEMA6BQ9H3T3 888 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 THAP9Q9H5L6 903 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 IFNKQ9P0W0 207 aa20.53■□□□□ 0.88
PRKCA-203ENST00000578063 LARSQ9P2J5 1176 aaKnown RBP20.53■□□□□ 0.88
PRKCA-203ENST00000578063 ZHX1Q9UKY1 873 aaPredicted RBP20.53■□□□□ 0.88
PRKCA-203ENST00000578063 UBE4BO95155 1302 aa20.52■□□□□ 0.88
PRKCA-203ENST00000578063 EIF3DO15371 548 aaKnown RBP eCLIP20.52■□□□□ 0.886e-6■■■■□ 21
PRKCA-203ENST00000578063 BMT2Q1RMZ1 405 aa20.52■□□□□ 0.88
PRKCA-203ENST00000578063 ODR4Q5SWX8 454 aa20.52■□□□□ 0.88
PRKCA-203ENST00000578063 ANKRD40Q6AI12 368 aa20.52■□□□□ 0.88
PRKCA-203ENST00000578063 IQSEC1Q6DN90 963 aa20.52■□□□□ 0.88
PRKCA-203ENST00000578063 PLPPR4Q7Z2D5 763 aa20.52■□□□□ 0.88
PRKCA-203ENST00000578063 TRMT1LQ7Z2T5 733 aaKnown RBP20.52■□□□□ 0.88
PRKCA-203ENST00000578063 CSGALNACT2Q8N6G5 542 aa20.52■□□□□ 0.88
PRKCA-203ENST00000578063 MCPH1Q8NEM0 835 aa20.52■□□□□ 0.88
PRKCA-203ENST00000578063 CFHR5Q9BXR6 569 aa20.52■□□□□ 0.88
PRKCA-203ENST00000578063 NRBP2Q9NSY0 501 aa20.52■□□□□ 0.88
PRKCA-203ENST00000578063 PPME1Q9Y570 386 aa20.52■□□□□ 0.88
PRKCA-203ENST00000578063 SFI1A8K8P3 1242 aa20.51■□□□□ 0.87
PRKCA-203ENST00000578063 TPM3P06753 285 aa20.51■□□□□ 0.87
PRKCA-203ENST00000578063 ATP4AP20648 1035 aa20.51■□□□□ 0.87
PRKCA-203ENST00000578063 SLC26A2P50443 739 aa20.51■□□□□ 0.87
PRKCA-203ENST00000578063 LACTBP83111 547 aaPredicted RBP20.51■□□□□ 0.87
PRKCA-203ENST00000578063 DUSP28Q4G0W2 176 aa20.51■□□□□ 0.87
PRKCA-203ENST00000578063 HSP90AA4PQ58FG1 418 aa20.51■□□□□ 0.87
PRKCA-203ENST00000578063 FAM178BQ8IXR5 827 aa20.51■□□□□ 0.87
PRKCA-203ENST00000578063 ANKRD20A12PQ8NF67 263 aa20.51■□□□□ 0.87
PRKCA-203ENST00000578063 CTAGE1Q96RT6 745 aa20.51■□□□□ 0.87
PRKCA-203ENST00000578063 DUSP9Q99956 384 aaKnown RBP20.51■□□□□ 0.87
PRKCA-203ENST00000578063 SH2D3AQ9BRG2 576 aa20.51■□□□□ 0.87
PRKCA-203ENST00000578063 NIFKQ9BYG3 293 aaKnown RBP20.51■□□□□ 0.87
PRKCA-203ENST00000578063 XPO4Q9C0E2 1151 aaKnown RBP20.51■□□□□ 0.87
PRKCA-203ENST00000578063 WDR81Q562E7 1941 aa20.51■□□□□ 0.87
PRKCA-203ENST00000578063 GCNT3O95395 438 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 MAPTP10636 758 aaKnown RBP20.5■□□□□ 0.87
PRKCA-203ENST00000578063 PLS3P13797 630 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 CYP2B6P20813 491 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 MAP2K2P36507 400 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 UBASH3AP57075 661 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 PPP4R3CPQ6ZMV5 832 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 PPTC7Q8NI37 304 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 GLG1Q92896 1179 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 ATP6V0A4Q9HBG4 840 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 FGFR1OPO95684 399 aaKnown RBP20.5■□□□□ 0.87
PRKCA-203ENST00000578063 CTGFP29279 349 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 PSMC4P43686 418 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 CASP5P51878 434 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 ALCAMQ13740 583 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 MTERF2Q49AM1 385 aa20.5■□□□□ 0.87
PRKCA-203ENST00000578063 ZCWPW2Q504Y3 356 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms