RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 CPLX1O14810 134 aa16.92■□□□□ 0.3
RN7SL560P-201ENST00000577943 STAG3L1P0CL83 205 aa16.92■□□□□ 0.3
RN7SL560P-201ENST00000577943 ATP4AP20648 1035 aa16.92■□□□□ 0.3
RN7SL560P-201ENST00000577943 CIITAP33076 1130 aa16.92■□□□□ 0.3
RN7SL560P-201ENST00000577943 SSRP1Q08945 709 aaKnown RBP16.92■□□□□ 0.3
RN7SL560P-201ENST00000577943 TMEM266Q2M3C6 531 aa16.92■□□□□ 0.3
RN7SL560P-201ENST00000577943 NPAS4Q8IUM7 802 aa16.92■□□□□ 0.3
RN7SL560P-201ENST00000577943 KIAA0319LQ8IZA0 1049 aa16.92■□□□□ 0.3
RN7SL560P-201ENST00000577943 BBXQ8WY36 941 aaPredicted RBP16.92■□□□□ 0.3
RN7SL560P-201ENST00000577943 CLP1Q92989 425 aaKnown RBP16.92■□□□□ 0.3
RN7SL560P-201ENST00000577943 NSUN3Q9H649 340 aaKnown RBP16.92■□□□□ 0.3
RN7SL560P-201ENST00000577943 SH3GLB2Q9NR46 395 aa16.92■□□□□ 0.3
RN7SL560P-201ENST00000577943 MAFBQ9Y5Q3 323 aaPredicted RBP16.92■□□□□ 0.3
RN7SL560P-201ENST00000577943 NEFLP07196 543 aa16.91■□□□□ 0.3
RN7SL560P-201ENST00000577943 LINC00271P0C7V0 271 aa16.91■□□□□ 0.3
RN7SL560P-201ENST00000577943 IBSPP21815 317 aaPredicted RBP16.91■□□□□ 0.3
RN7SL560P-201ENST00000577943 LEXMQ3ZCV2 418 aa16.91■□□□□ 0.3
RN7SL560P-201ENST00000577943 TCEAL5Q5H9L2 206 aa16.91■□□□□ 0.3
RN7SL560P-201ENST00000577943 ODR4Q5SWX8 454 aa16.91■□□□□ 0.3
RN7SL560P-201ENST00000577943 EP400NLQ6ZTU2 488 aa16.91■□□□□ 0.3
RN7SL560P-201ENST00000577943 GABBR1Q9UBS5 961 aa16.91■□□□□ 0.3
RN7SL560P-201ENST00000577943 LRFN2Q9ULH4 789 aa16.91■□□□□ 0.3
RN7SL560P-201ENST00000577943 ZBTB42B2RXF5 422 aa16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 RPS6KA5O75582 802 aa16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 USP11P51784 963 aa16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 PAN2Q504Q3 1202 aaKnown RBP16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 CMTR2Q8IYT2 770 aaKnown RBP16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 METTL13Q8N6R0 699 aa16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 LENG9Q96B70 501 aa16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 ZNF274Q96GC6 653 aaPredicted RBP16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 PPP1R16BQ96T49 567 aa16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 LARP6Q9BRS8 491 aaKnown RBP16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 UPF3BQ9BZI7 483 aaKnown RBP16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 LMAN2LQ9H0V9 348 aa16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 TMX1Q9H3N1 280 aa16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 CDHR5Q9HBB8 845 aa16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 CEP131Q9UPN4 1083 aa16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 NOC2LQ9Y3T9 749 aaKnown RBP16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 PLXNA4Q9HCM2 1894 aa16.9■□□□□ 0.3
RN7SL560P-201ENST00000577943 BDP1A6H8Y1 2624 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 WDR64B1ANS9 1081 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 GRM6O15303 877 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 MSH4O15457 936 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 C22orf31O95567 290 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 STK3Q13188 491 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 CPLX2Q6PUV4 134 aaKnown RBP16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 CRIPAKQ8N1N5 446 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 TBCKQ8TEA7 893 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 TMEM40Q8WWA1 233 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 FAM167AQ96KS9 214 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 PLVAPQ9BX97 442 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 C22orf23Q9BZE7 217 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 TM6SF1Q9BZW5 370 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 ERVK-5Q9HDB9 667 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 DISC1Q9NRI5 854 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 ST3GAL5Q9UNP4 418 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 PCDHB7Q9Y5E2 793 aa16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 MRPL42Q9Y6G3 142 aaKnown RBP16.89■□□□□ 0.29
RN7SL560P-201ENST00000577943 DENND3A2RUS2 1198 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 GPR182O15218 404 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 GAS7O60861 476 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 CSPG5O95196 566 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 DEXIO95424 95 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 VTNP04004 478 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 COL9A1P20849 921 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 SARSP49591 514 aaKnown RBP16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 KIZQ2M2Z5 673 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 PTCRAQ6ISU1 281 aaPredicted RBP16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 PABPC5Q96DU9 382 aaKnown RBP16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 OSMRQ99650 979 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 ADAM2Q99965 735 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 TEKT3Q9BXF9 490 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 C1QTNF1Q9BXJ1 281 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 ALG13Q9NP73 1137 aaKnown RBP16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 PDRG1Q9NUG6 133 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 CLDND1Q9NY35 253 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 PCDHA4Q9UN74 947 aa16.88■□□□□ 0.29
RN7SL560P-201ENST00000577943 H3BQ06 376 aaPredicted RBP16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 MAGEB2O15479 319 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 CHMP2AO43633 222 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 EDIL3O43854 480 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 MGEA5O60502 916 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 IL9P15248 144 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 TMOD1P28289 359 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 GATMP50440 423 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 CRYBB1P53674 252 aaPredicted RBP16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 LRCH2Q5VUJ6 765 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 EFCAB12Q6NXP0 572 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 FAM43BQ6ZT52 329 aaPredicted RBP16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 BLIDQ8IZY5 108 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 NEK9Q8TD19 979 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 P2RX5Q93086 422 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 RIT2Q99578 217 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 C1orf112Q9NSG2 853 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 NRBP2Q9NSY0 501 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 AKT3Q9Y243 479 aa16.87■□□□□ 0.29
RN7SL560P-201ENST00000577943 NCK2O43639 380 aa16.86■□□□□ 0.29
RN7SL560P-201ENST00000577943 MMP1P03956 469 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms